RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 SLC25A34Q6PIV7 304 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 FAM223AQ8IWN6 122 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 ZNF586Q9NXT0 402 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 A0A087WYN8 130 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 CEBPZOSA8MTT3 80 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 KRTAP16-1A8MUX0 517 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 TAX1BP3O14907 124 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 PITX3O75364 302 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 ERHP84090 104 aaKnown RBP4.29□□□□□ -1.72
MCF2-206ENST00000446225 RRN3P1Q2M238 152 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 Q5BKY6 102 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 AMTNQ6UX39 209 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 LINC00305Q7Z4B0 112 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 RPP25LQ8N5L8 163 aaKnown RBP4.29□□□□□ -1.72
MCF2-206ENST00000446225 SLC25A29Q8N8R3 303 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 ZNF414Q96IQ9 312 aa4.29□□□□□ -1.72
MCF2-206ENST00000446225 CIB3Q96Q77 187 aaPredicted RBP4.29□□□□□ -1.72
MCF2-206ENST00000446225 IGHV1-58A0A0C4DH39 117 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 FAM168BA1KXE4 195 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 ZNF727A8MUV8 499 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 IGLL5B9A064 214 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 K7EIM0 57 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 IL5P05113 134 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 LINC00869P0C866 280 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 RNASE2P10153 161 aaKnown RBP4.28□□□□□ -1.72
MCF2-206ENST00000446225 SNCAP37840 140 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 TMEM258P61165 79 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 ZNF431Q8TF32 576 aaPredicted RBP4.28□□□□□ -1.72
MCF2-206ENST00000446225 DPH3Q96FX2 82 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 TUBA4BQ9H853 241 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 FBN3Q75N90 2809 aa4.28□□□□□ -1.72
MCF2-206ENST00000446225 NOTCH1P46531 2555 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 PIGBOS1A0A0B4J2F0 54 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 C9JQL5 133 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 I3L2K1 104 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 ZNF73O43830 326 aaPredicted RBP4.27□□□□□ -1.73
MCF2-206ENST00000446225 GZMBP10144 247 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 SLC25A6P12236 298 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 IFITM1P13164 125 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 LCA10Q71F78 164 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 DCANP1Q8TF63 244 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 TRBV7-1A0A0A6YYK4 115 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 A8MWV9 139 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 SEC11BP0C7V7 166 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 ZNF705DP0CH99 300 aaPredicted RBP4.27□□□□□ -1.73
MCF2-206ENST00000446225 IAPPP10997 89 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 EIF5AP63241 154 aaKnown RBP4.27□□□□□ -1.73
MCF2-206ENST00000446225 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 EIF5AL1Q6IS14 154 aaKnown RBP4.27□□□□□ -1.73
MCF2-206ENST00000446225 C21orf62Q9NYP8 219 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 MRPL36Q9P0J6 103 aaKnown RBP4.27□□□□□ -1.73
MCF2-206ENST00000446225 CACFD1Q9UGQ2 172 aa4.27□□□□□ -1.73
MCF2-206ENST00000446225 OR2T8A6NH00 312 aa4.26□□□□□ -1.73
MCF2-206ENST00000446225 M0R378 163 aa4.26□□□□□ -1.73
MCF2-206ENST00000446225 CST7O76096 145 aa4.26□□□□□ -1.73
MCF2-206ENST00000446225 PRB2P02812 416 aaPredicted RBP4.26□□□□□ -1.73
MCF2-206ENST00000446225 FABP2P12104 132 aa4.26□□□□□ -1.73
MCF2-206ENST00000446225 KRTAP10-11P60412 298 aa4.26□□□□□ -1.73
MCF2-206ENST00000446225 C2orf83Q53S99 150 aa4.26□□□□□ -1.73
MCF2-206ENST00000446225 Q56UQ5 140 aa4.26□□□□□ -1.73
MCF2-206ENST00000446225 SVBPQ8N300 66 aa4.26□□□□□ -1.73
MCF2-206ENST00000446225 OR5C1Q8NGR4 320 aa4.26□□□□□ -1.73
MCF2-206ENST00000446225 SNRPGP15A8MWD9 76 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 H3BMG7 143 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 SYNGR2O43760 224 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 SIX6O95475 246 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 CTSGP08311 255 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 IGLC1P0CG04 106 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
MCF2-206ENST00000446225 ZNF705AQ6ZN79 300 aaPredicted RBP4.25□□□□□ -1.73
MCF2-206ENST00000446225 GPHB5Q86YW7 130 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 TMEM256Q8N2U0 113 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 ZNF492Q9P255 531 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 DNAH3Q8TD57 4116 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 TRAV13-1A0A0B4J241 112 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 A0A1B0GVX0 72 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 SSSCA1O60232 199 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 LTAP01374 205 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 APCSP02743 223 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 ZNF80P51504 273 aaPredicted RBP4.25□□□□□ -1.73
MCF2-206ENST00000446225 KPRPQ5T749 579 aaPredicted RBP4.25□□□□□ -1.73
MCF2-206ENST00000446225 MRPL54Q6P161 138 aaKnown RBP4.25□□□□□ -1.73
MCF2-206ENST00000446225 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 VAMP8Q9BV40 100 aa4.25□□□□□ -1.73
MCF2-206ENST00000446225 MEGF8Q7Z7M0 2845 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 IGHV3OR16-8A0A075B7F1 116 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 INAFM2P0DMQ5 153 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 PEA15Q15121 130 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 IQCJQ1A5X6 159 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 SPANXN5Q5MJ07 72 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 Q6AWC8 147 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 MORN3Q6PF18 240 aaPredicted RBP4.24□□□□□ -1.73
MCF2-206ENST00000446225 ORMDL3Q8N138 153 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 KCNRGQ8N5I3 272 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 Q8N976 141 aa4.24□□□□□ -1.73
MCF2-206ENST00000446225 RPP21Q9H633 154 aaKnown RBP4.24□□□□□ -1.73
MCF2-206ENST00000446225 PSENENQ9NZ42 101 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 282.1 ms