RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 HLA-DRB4P13762 266 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 COX6B1P14854 86 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 KDELR1P24390 212 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 NCS1P62166 190 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 RPS25P62851 125 aaKnown RBP2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 DIAPH2-AS1Q14236 149 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 MDC1Q14676 2089 aaKnown RBP2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 MYLKQ15746 1914 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 DEFB109BQ30KR1 87 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 C2orf82Q6UX34 121 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 TMEM91Q6ZNR0 172 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 COA5Q86WW8 74 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 CTAGE3PQ8IX95 158 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 Q96M85 177 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 TP53RKQ96S44 253 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 NABP2Q9BQ15 211 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 LPAR5Q9H1C0 372 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 CHCHD2Q9Y6H1 151 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 HLA-DRB4X5D2U9 266 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 PCLOQ9Y6V0 5065 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 AKAP6Q13023 2319 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 CNTRLQ7Z7A1 2325 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 SVEP1Q4LDE5 3571 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 VWFP04275 2813 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 C10orf142B7Z368 130 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 ERC2-IT1O76042 136 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 SPCS2Q15005 226 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 C1orf137Q5JT78 98 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 RPS19BP1Q86WX3 136 aaKnown RBP2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 OR5AK2Q8NH90 309 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 PSMF1Q92530 271 aa2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 SOX21Q9Y651 276 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 EPPK1P58107 5090 aaKnown RBP2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 MYO18AQ92614 2054 aaKnown RBP2.03□□□□□ -2.08
HMGB1P48-201ENST00000446155 PDCD11Q14690 1871 aaKnown RBP2.03□□□□□ -2.09
HMGB1P48-201ENST00000446155 TPST1O60507 370 aa2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 CD2P06729 351 aa2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 GPX1P07203 203 aa2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 CCL4P13236 92 aa2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 HIST1H1BP16401 226 aaKnown RBP2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 SNRPD3P62318 126 aaKnown RBP2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 GLIPR1L1Q6UWM5 242 aa2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 Q6ZRN7 208 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 TEN1Q86WV5 123 aa2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 C1orf54Q8WWF1 131 aa2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 COMMD3Q9UBI1 195 aa2.02□□□□□ -2.09
HMGB1P48-201ENST00000446155 TRRAPQ9Y4A5 3859 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 A0A1B0GV90 55 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 NCR2O95944 276 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 CXCL8P10145 99 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 CNBPP62633 177 aaKnown RBP2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 ZNF833PQ6ZTB9 187 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 LINC00269Q8N2A0 174 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 Q8TAT8 98 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 C4orf3Q8WVX3 66 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 CST11Q9H112 138 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 TMEM106BQ9NUM4 274 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 DNAJC15Q9Y5T4 150 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
HMGB1P48-201ENST00000446155 FAM236AA0A1B0GUQ0 79 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 FAM236BA0A1B0GV22 79 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 C9orf170A2RU37 121 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 NPFFO15130 113 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 CD14P08571 375 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 ETV6P41212 452 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 PCBD1P61457 104 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 COPZ1P61923 177 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 RRAS2P62070 204 aaPredicted RBP2□□□□□ -2.09
HMGB1P48-201ENST00000446155 SELENOWP63302 87 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 C10orf55Q5SWW7 151 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 OR10AC1Q8NH08 325 aa2□□□□□ -2.09
HMGB1P48-201ENST00000446155 METTL1Q9UBP6 276 aaKnown RBP2□□□□□ -2.09
HMGB1P48-201ENST00000446155 CEP192Q8TEP8 1941 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 ZGRF1Q86YA3 2104 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 MED12LQ86YW9 2145 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 TRBV6-8A0A0A6YYG3 113 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 CKS2P33552 79 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 KRTAP26-1Q6PEX3 210 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 KRTAP13-1Q8IUC0 172 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 OR5AS1Q8N127 324 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 C10orf111Q8N326 155 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 FAM19A2Q8N3H0 131 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 ARL11Q969Q4 196 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 HRNRQ86YZ3 2850 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 HYDINQ4G0P3 5121 aa1.99□□□□□ -2.09
HMGB1P48-201ENST00000446155 KIAA1549Q9HCM3 1950 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 FREM1Q5H8C1 2179 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 TENM2Q9NT68 2774 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 LOC107984156A0A0G2JMH3 177 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 C3orf85A0A1B0GTC6 90 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 PNMA8CA0A1B0GUJ8 204 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 GNG7O60262 68 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 HYPMO75409 117 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 CD3DP04234 171 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 RNASE3P12724 160 aaKnown RBP1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 NEDD8Q15843 81 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 DEFB133Q30KQ1 61 aa1.98□□□□□ -2.09
HMGB1P48-201ENST00000446155 ASB16-AS1Q495Z4 193 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms