RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 NIT1Q86X76 327 aa11.95□□□□□ -0.5
SGCE-206ENST00000445866 CHCHD5Q9BSY4 110 aa11.95□□□□□ -0.5
SGCE-206ENST00000445866 MRPS16Q9Y3D3 137 aaKnown RBP11.95□□□□□ -0.5
SGCE-206ENST00000445866 C1orf196B1AJZ1 125 aa11.94□□□□□ -0.5
SGCE-206ENST00000445866 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
SGCE-206ENST00000445866 FA2HQ7L5A8 372 aa11.94□□□□□ -0.5
SGCE-206ENST00000445866 BAGE3Q86Y29 109 aa11.94□□□□□ -0.5
SGCE-206ENST00000445866 TMEM243Q9BU79 118 aa11.94□□□□□ -0.5
SGCE-206ENST00000445866 LINC00614P0C842 121 aa11.93□□□□□ -0.5
SGCE-206ENST00000445866 RAB5BP61020 215 aa11.93□□□□□ -0.5
SGCE-206ENST00000445866 Q0VG73 95 aa11.92□□□□□ -0.5
SGCE-206ENST00000445866 LAGE3Q14657 143 aa11.92□□□□□ -0.5
SGCE-206ENST00000445866 LGALS9CQ6DKI2 356 aa11.92□□□□□ -0.5
SGCE-206ENST00000445866 CHCHD7Q9BUK0 85 aa11.92□□□□□ -0.5
SGCE-206ENST00000445866 UBE2L6O14933 153 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST1H2BKO60814 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 LY6G6CO95867 125 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST1H2BJP06899 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST1H2BOP23527 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST1H2BBP33778 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST1H2BDP58876 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST1H2BCP62807 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 GAGE6Q13070 117 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST2H2BEQ16778 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST1H2BHQ93079 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST1H2BNQ99877 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 HIST1H2BMQ99879 126 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 Q9H8V8 135 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.91□□□□□ -0.5
SGCE-206ENST00000445866 IGKV2-29A2NJV5 120 aaPredicted RBP11.91□□□□□ -0.5
SGCE-206ENST00000445866 K7EMI3 77 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 ESDP10768 282 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 ORMDL2Q53FV1 153 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 WFDC10BQ8IUB3 73 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 UPK3BQ9BT76 320 aa11.91□□□□□ -0.5
SGCE-206ENST00000445866 RNASEKQ6P5S7 137 aaKnown RBP11.9□□□□□ -0.5
SGCE-206ENST00000445866 AP5S1Q9NUS5 200 aa11.9□□□□□ -0.5
SGCE-206ENST00000445866 TMA7Q9Y2S6 64 aaKnown RBP11.9□□□□□ -0.5
SGCE-206ENST00000445866 SIVA1O15304 175 aa11.89□□□□□ -0.51
SGCE-206ENST00000445866 URB1-AS1Q96HZ7 61 aa11.89□□□□□ -0.51
SGCE-206ENST00000445866 A0A087WX48 190 aa11.88□□□□□ -0.51
SGCE-206ENST00000445866 C20orf203Q8NBC4 194 aa11.88□□□□□ -0.51
SGCE-206ENST00000445866 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
SGCE-206ENST00000445866 TMEM18Q96B42 140 aa11.87□□□□□ -0.51
SGCE-206ENST00000445866 H7C423 109 aa11.87□□□□□ -0.51
SGCE-206ENST00000445866 BTF3P20290 206 aaKnown RBP11.87□□□□□ -0.51
SGCE-206ENST00000445866 G0S2P27469 103 aa11.87□□□□□ -0.51
SGCE-206ENST00000445866 PKIAP61925 76 aa11.87□□□□□ -0.51
SGCE-206ENST00000445866 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
SGCE-206ENST00000445866 LINC00476Q8WZB0 136 aa11.87□□□□□ -0.51
SGCE-206ENST00000445866 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
SGCE-206ENST00000445866 IGHV3-30P01768 117 aa11.86□□□□□ -0.51
SGCE-206ENST00000445866 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
SGCE-206ENST00000445866 IGHV3-30-3P0DP02 117 aa11.86□□□□□ -0.51
SGCE-206ENST00000445866 IGHV3-30-5P0DP03 117 aa11.86□□□□□ -0.51
SGCE-206ENST00000445866 FGF6P10767 208 aa11.86□□□□□ -0.51
SGCE-206ENST00000445866 RPL39P62891 51 aaKnown RBP11.86□□□□□ -0.51
SGCE-206ENST00000445866 Q8N3U1 123 aa11.85□□□□□ -0.51
SGCE-206ENST00000445866 SERF1AO75920 110 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 DNAH10OSP0CZ25 163 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 NDUFA6P56556 154 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 RBX1P62877 108 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 LINC01556Q5JQF7 62 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 DGAT2L7PQ6IED9 249 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 C2orf66Q6UXQ4 117 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 Q8N976 141 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 LYSTQ99698 3801 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 CYSLTR1Q9Y271 337 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 TRAV9-2A0A087WT02 112 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 PMCHL1Q16048 86 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 MPV17L2Q567V2 206 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 TMEM101Q96IK0 257 aa11.84□□□□□ -0.51
SGCE-206ENST00000445866 A0A1B0GUV1 79 aa11.83□□□□□ -0.52
SGCE-206ENST00000445866 NUPR1O60356 82 aa11.83□□□□□ -0.52
SGCE-206ENST00000445866 HSBP1O75506 76 aa11.83□□□□□ -0.52
SGCE-206ENST00000445866 SMAGPQ0VAQ4 97 aa11.83□□□□□ -0.52
SGCE-206ENST00000445866 VPS13DQ5THJ4 4388 aa11.83□□□□□ -0.52
SGCE-206ENST00000445866 LOC105371267A0A1B0GV96 52 aa11.82□□□□□ -0.52
SGCE-206ENST00000445866 IGLV4-60A0A075B6I1 120 aa11.81□□□□□ -0.52
SGCE-206ENST00000445866 LINC00310P59036 64 aa11.81□□□□□ -0.52
SGCE-206ENST00000445866 MRPL52Q86TS9 123 aaKnown RBP11.81□□□□□ -0.52
SGCE-206ENST00000445866 OR5A1Q8NGJ0 315 aa11.81□□□□□ -0.52
SGCE-206ENST00000445866 TOMM6Q96B49 74 aa11.81□□□□□ -0.52
SGCE-206ENST00000445866 UBE2D4Q9Y2X8 147 aa11.81□□□□□ -0.52
SGCE-206ENST00000445866 ANGP03950 147 aaKnown RBP11.81□□□□□ -0.52
SGCE-206ENST00000445866 FAM19A2Q8N3H0 131 aa11.81□□□□□ -0.52
SGCE-206ENST00000445866 SCGB3A1Q96QR1 104 aa11.81□□□□□ -0.52
SGCE-206ENST00000445866 KLK12Q9UKR0 248 aa11.81□□□□□ -0.52
SGCE-206ENST00000445866 HBDP02042 147 aa11.8□□□□□ -0.52
SGCE-206ENST00000445866 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
SGCE-206ENST00000445866 TIMM21Q9BVV7 248 aa11.8□□□□□ -0.52
SGCE-206ENST00000445866 SPANXA1Q9NS26 97 aa11.8□□□□□ -0.52
SGCE-206ENST00000445866 M0R2N4 97 aa11.79□□□□□ -0.52
SGCE-206ENST00000445866 PYGO1Q9Y3Y4 419 aa11.79□□□□□ -0.52
SGCE-206ENST00000445866 A0A096LNJ9 63 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 NBDYA0A0U1RRE5 68 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 LINC01549A6NIU2 74 aa11.78□□□□□ -0.52
SGCE-206ENST00000445866 COA6Q5JTJ3 125 aaKnown RBP11.78□□□□□ -0.52
SGCE-206ENST00000445866 ZNF664Q8N3J9 261 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms