RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 KLLNB2CW77 178 aa8.83□□□□□ -1
MSH6-204ENST00000445503 COX6B1P14854 86 aa8.83□□□□□ -1
MSH6-204ENST00000445503 ZNF415Q09FC8 603 aa8.83□□□□□ -1
MSH6-204ENST00000445503 K7EMT4 169 aa8.83□□□□□ -1
MSH6-204ENST00000445503 CFAP126Q5VTH2 177 aa8.82□□□□□ -1
MSH6-204ENST00000445503 LINC01356Q8N9X3 169 aa8.82□□□□□ -1
MSH6-204ENST00000445503 DCANP1Q8TF63 244 aa8.82□□□□□ -1
MSH6-204ENST00000445503 COL12A1Q99715 3063 aa8.82□□□□□ -1
MSH6-204ENST00000445503 JMJD1CQ15652 2540 aa8.82□□□□□ -1
MSH6-204ENST00000445503 FN1P02751 2386 aaKnown RBP8.82□□□□□ -1
MSH6-204ENST00000445503 IGHV3-30P01768 117 aa8.82□□□□□ -1
MSH6-204ENST00000445503 IGHV3-30-5P0DP03 117 aa8.82□□□□□ -1
MSH6-204ENST00000445503 ZNF22P17026 224 aaPredicted RBP8.82□□□□□ -1
MSH6-204ENST00000445503 IGHV3-30-3P0DP02 117 aa8.81□□□□□ -1
MSH6-204ENST00000445503 C19orf54Q5BKX5 351 aa8.81□□□□□ -1
MSH6-204ENST00000445503 TRBV27A0A0K0K1C4 114 aa8.81□□□□□ -1
MSH6-204ENST00000445503 UBE2L6O14933 153 aa8.81□□□□□ -1
MSH6-204ENST00000445503 STHQ8IWL8 128 aa8.81□□□□□ -1
MSH6-204ENST00000445503 PEMTQ9UBM1 199 aa8.8□□□□□ -1
MSH6-204ENST00000445503 MUC4Q99102 2169 aa8.8□□□□□ -1
MSH6-204ENST00000445503 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
MSH6-204ENST00000445503 K7EQG2 157 aa8.8□□□□□ -1
MSH6-204ENST00000445503 LGALS9O00182 355 aa8.8□□□□□ -1
MSH6-204ENST00000445503 UBE2D1P51668 147 aa8.8□□□□□ -1
MSH6-204ENST00000445503 CFHR3Q02985 330 aa8.8□□□□□ -1
MSH6-204ENST00000445503 PKIGQ9Y2B9 76 aa8.8□□□□□ -1
MSH6-204ENST00000445503 MTORP42345 2549 aa8.8□□□□□ -1
MSH6-204ENST00000445503 NFE4Q86UQ8 179 aa8.8□□□□□ -1
MSH6-204ENST00000445503 KIF25-AS1Q9Y6Z4 181 aa8.79□□□□□ -1
MSH6-204ENST00000445503 DCHS2Q6V1P9 2916 aa8.79□□□□□ -1
MSH6-204ENST00000445503 TMEM223A0PJW6 202 aa8.79□□□□□ -1
MSH6-204ENST00000445503 SCGB1A1P11684 91 aa8.79□□□□□ -1
MSH6-204ENST00000445503 LINC00315P59091 139 aa8.79□□□□□ -1
MSH6-204ENST00000445503 TRGV2A0A075B6R0 118 aa8.79□□□□□ -1
MSH6-204ENST00000445503 A0A0J9YXY3 114 aa8.79□□□□□ -1
MSH6-204ENST00000445503 Q6ZUT4 128 aa8.79□□□□□ -1
MSH6-204ENST00000445503 IGLV1-40P01703 118 aa8.78□□□□□ -1
MSH6-204ENST00000445503 CRIP2P52943 208 aaPredicted RBP8.78□□□□□ -1
MSH6-204ENST00000445503 LINC01620Q4KN68 170 aa8.78□□□□□ -1
MSH6-204ENST00000445503 CLEC2BQ92478 149 aa8.78□□□□□ -1
MSH6-204ENST00000445503 GAGE12JA6NER3 117 aa8.78□□□□□ -1
MSH6-204ENST00000445503 GAGE4Q13068 117 aa8.78□□□□□ -1
MSH6-204ENST00000445503 ANKRD17O75179 2603 aaKnown RBP8.78□□□□□ -1
MSH6-204ENST00000445503 SPENQ96T58 3664 aaKnown RBP8.78□□□□□ -1
MSH6-204ENST00000445503 PRIMA1Q86XR5 153 aa8.78□□□□□ -1
MSH6-204ENST00000445503 TMEM61Q8N0U2 210 aa8.78□□□□□ -1
MSH6-204ENST00000445503 SPATA25Q9BR10 227 aa8.78□□□□□ -1
MSH6-204ENST00000445503 H3BMM0 161 aa8.77□□□□□ -1
MSH6-204ENST00000445503 IGHV3-33P01772 117 aa8.77□□□□□ -1
MSH6-204ENST00000445503 XGP55808 180 aa8.77□□□□□ -1
MSH6-204ENST00000445503 C18orf65Q6ZTR6 163 aa8.77□□□□□ -1
MSH6-204ENST00000445503 UBE2WQ96B02 151 aa8.77□□□□□ -1
MSH6-204ENST00000445503 LINC01619G3V211 115 aa8.77□□□□□ -1.01
MSH6-204ENST00000445503 SMCPP49901 116 aaPredicted RBP8.77□□□□□ -1.01
MSH6-204ENST00000445503 INSP01308 110 aa8.77□□□□□ -1.01
MSH6-204ENST00000445503 PSMB8P28062 276 aa8.77□□□□□ -1.01
MSH6-204ENST00000445503 VPREB3Q9UKI3 123 aa8.77□□□□□ -1.01
MSH6-204ENST00000445503 ZNF462Q96JM2 2506 aa8.77□□□□□ -1.01
MSH6-204ENST00000445503 GAGE7O76087 117 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 GAGE12FP0CL80 117 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 GAGE12GP0CL81 117 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 GAGE12IP0CL82 117 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 C9orf85Q96MD7 179 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 PRO0461Q9UI25 63 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 DOPEY1Q5JWR5 2465 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 ELANEP08246 267 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 CARD19Q96LW7 228 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 Q6ZSV7 163 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 HIVEP2P31629 2446 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 TRBV6-5A0A0K0K1A5 114 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 TEX49A0A1B0GTD5 131 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 GATA3P23771 443 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 NSUN5P1Q3KNT7 163 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 Q9H8V8 135 aa8.76□□□□□ -1.01
MSH6-204ENST00000445503 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
MSH6-204ENST00000445503 RPL36AP83881 106 aaKnown RBP8.75□□□□□ -1.01
MSH6-204ENST00000445503 ATP6V0E2Q8NHE4 81 aa8.75□□□□□ -1.01
MSH6-204ENST00000445503 RPL36ALQ969Q0 106 aaKnown RBP8.75□□□□□ -1.01
MSH6-204ENST00000445503 C5orf47Q569G3 176 aa8.75□□□□□ -1.01
MSH6-204ENST00000445503 C11orf68Q9H3H3 251 aaKnown RBP8.75□□□□□ -1.01
MSH6-204ENST00000445503 PRB1P04280 392 aa8.75□□□□□ -1.01
MSH6-204ENST00000445503 DSCR9P59020 149 aa8.75□□□□□ -1.01
MSH6-204ENST00000445503 ICOSQ9Y6W8 199 aa8.75□□□□□ -1.01
MSH6-204ENST00000445503 SVEP1Q4LDE5 3571 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 TMEM101Q96IK0 257 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 LINC00467Q9BRT7 94 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 M0QXV9 152 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 UBE2D3P61077 147 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 UBE2D2P62837 147 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 EPG5Q9HCE0 2579 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 IGHV1-58A0A0C4DH39 117 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 TRIAP1O43715 76 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 Q9UF83 564 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 CDKN2A-AS1Q9UH64 79 aa8.74□□□□□ -1.01
MSH6-204ENST00000445503 RPL32P62910 135 aaKnown RBP8.73□□□□□ -1.01
MSH6-204ENST00000445503 RNF183Q96D59 192 aa8.73□□□□□ -1.01
MSH6-204ENST00000445503 ACANP16112 2415 aa8.73□□□□□ -1.01
MSH6-204ENST00000445503 FAM19A4Q96LR4 140 aa8.73□□□□□ -1.01
MSH6-204ENST00000445503 NXPH4O95158 308 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms