RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 UBE2L6O14933 153 aa11.68□□□□□ -0.54
SMARCAL1-209ENST00000444508 CRPP02741 224 aa11.68□□□□□ -0.54
SMARCAL1-209ENST00000444508 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-209ENST00000444508 SPATA12Q7Z6I5 190 aa11.68□□□□□ -0.54
SMARCAL1-209ENST00000444508 COX11Q9Y6N1 276 aa11.68□□□□□ -0.54
SMARCAL1-209ENST00000444508 A0A087WTM6 91 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 A0A1B0GXF2 115 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 SMKR1H3BMG3 65 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 I3L3M4 83 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 NCR2O95944 276 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 PMCHP20382 165 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 RBX1P62877 108 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 Q0VG73 95 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 Q8N976 141 aa11.67□□□□□ -0.54
SMARCAL1-209ENST00000444508 APCSP02743 223 aa11.66□□□□□ -0.54
SMARCAL1-209ENST00000444508 RPS10P46783 165 aaKnown RBP11.66□□□□□ -0.54
SMARCAL1-209ENST00000444508 MRPL51Q4U2R6 128 aaKnown RBP11.66□□□□□ -0.54
SMARCAL1-209ENST00000444508 IGKV2D-24A0A075B6R9 120 aa11.65□□□□□ -0.54
SMARCAL1-209ENST00000444508 C16orf90A8MZG2 172 aa11.65□□□□□ -0.54
SMARCAL1-209ENST00000444508 CKS2P33552 79 aa11.65□□□□□ -0.54
SMARCAL1-209ENST00000444508 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
SMARCAL1-209ENST00000444508 CTDSP1Q9GZU7 261 aa11.64□□□□□ -0.55
SMARCAL1-209ENST00000444508 POLR2KP53803 58 aaKnown RBP11.63□□□□□ -0.55
SMARCAL1-209ENST00000444508 KRTAP10-2P60368 255 aa11.63□□□□□ -0.55
SMARCAL1-209ENST00000444508 SUMO2P61956 95 aaKnown RBP11.63□□□□□ -0.55
SMARCAL1-209ENST00000444508 NRACQ8N912 160 aa11.63□□□□□ -0.55
SMARCAL1-209ENST00000444508 BTF3L4Q96K17 158 aa11.63□□□□□ -0.55
SMARCAL1-209ENST00000444508 IMMP2LQ96T52 175 aa11.63□□□□□ -0.55
SMARCAL1-209ENST00000444508 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
SMARCAL1-209ENST00000444508 A0A1B0GUV1 79 aa11.62□□□□□ -0.55
SMARCAL1-209ENST00000444508 VCYO14598 125 aa11.62□□□□□ -0.55
SMARCAL1-209ENST00000444508 MIAQ16674 131 aa11.62□□□□□ -0.55
SMARCAL1-209ENST00000444508 ENHOQ6UWT2 76 aa11.62□□□□□ -0.55
SMARCAL1-209ENST00000444508 LINC00269Q8N2A0 174 aa11.62□□□□□ -0.55
SMARCAL1-209ENST00000444508 C1orf43Q9BWL3 253 aa11.62□□□□□ -0.55
SMARCAL1-209ENST00000444508 TMEM242Q9NWH2 141 aa11.62□□□□□ -0.55
SMARCAL1-209ENST00000444508 PGPEP1Q9NXJ5 209 aa11.62□□□□□ -0.55
SMARCAL1-209ENST00000444508 DNAH5Q8TE73 4624 aa11.61□□□□□ -0.55
SMARCAL1-209ENST00000444508 LRCOL1A6NCL2 159 aa11.61□□□□□ -0.55
SMARCAL1-209ENST00000444508 D6R8Y8 96 aa11.61□□□□□ -0.55
SMARCAL1-209ENST00000444508 H7C423 109 aa11.61□□□□□ -0.55
SMARCAL1-209ENST00000444508 TSHBP01222 138 aa11.61□□□□□ -0.55
SMARCAL1-209ENST00000444508 PPBPP02775 128 aa11.61□□□□□ -0.55
SMARCAL1-209ENST00000444508 C10orf91Q5T1B1 145 aa11.61□□□□□ -0.55
SMARCAL1-209ENST00000444508 AMMECR1LQ6DCA0 310 aa11.61□□□□□ -0.55
SMARCAL1-209ENST00000444508 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-209ENST00000444508 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
SMARCAL1-209ENST00000444508 FCER1GP30273 86 aa11.6□□□□□ -0.55
SMARCAL1-209ENST00000444508 CDPF1Q6NVV7 123 aa11.6□□□□□ -0.55
SMARCAL1-209ENST00000444508 CLPSL2Q6UWE3 100 aa11.6□□□□□ -0.55
SMARCAL1-209ENST00000444508 KIR2DL4Q99706 377 aa11.6□□□□□ -0.55
SMARCAL1-209ENST00000444508 C20orf78Q9BR46 151 aa11.6□□□□□ -0.55
SMARCAL1-209ENST00000444508 PRR34Q9NV39 138 aa11.6□□□□□ -0.55
SMARCAL1-209ENST00000444508 CARHSP1Q9Y2V2 147 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-209ENST00000444508 KIAA1109Q2LD37 5005 aa11.59□□□□□ -0.55
SMARCAL1-209ENST00000444508 IGLV4-60A0A075B6I1 120 aa11.59□□□□□ -0.55
SMARCAL1-209ENST00000444508 TRBV24-1A0A075B6N3 115 aa11.59□□□□□ -0.55
SMARCAL1-209ENST00000444508 TNFRSF6BO95407 300 aa11.59□□□□□ -0.55
SMARCAL1-209ENST00000444508 REG3AQ06141 175 aa11.59□□□□□ -0.55
SMARCAL1-209ENST00000444508 RNASEKQ6P5S7 137 aaKnown RBP11.59□□□□□ -0.55
SMARCAL1-209ENST00000444508 C20orf203Q8NBC4 194 aa11.59□□□□□ -0.55
SMARCAL1-209ENST00000444508 S100PP25815 95 aa11.58□□□□□ -0.56
SMARCAL1-209ENST00000444508 ORMDL3Q8N138 153 aa11.58□□□□□ -0.56
SMARCAL1-209ENST00000444508 Q8N814 137 aa11.58□□□□□ -0.56
SMARCAL1-209ENST00000444508 TRAV9-1A0A075B6T8 112 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 C7orf77A4D0Y5 90 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 PHOX2AO14813 284 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 FGF6P10767 208 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 ESDP10768 282 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 RHEBQ15382 184 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 TMEM136Q6ZRR5 245 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 MAPKAPK5-AS1Q8N8E1 139 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 BAALCQ8WXS3 180 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 LRP1BQ9NZR2 4599 aa11.57□□□□□ -0.56
SMARCAL1-209ENST00000444508 LECT2O14960 151 aa11.56□□□□□ -0.56
SMARCAL1-209ENST00000444508 NPYP01303 97 aa11.56□□□□□ -0.56
SMARCAL1-209ENST00000444508 ZNF25P17030 456 aaPredicted RBP11.56□□□□□ -0.56
SMARCAL1-209ENST00000444508 RPL32P62910 135 aaKnown RBP11.56□□□□□ -0.56
SMARCAL1-209ENST00000444508 NDUFA5Q16718 116 aa11.56□□□□□ -0.56
SMARCAL1-209ENST00000444508 CLRN3Q8NCR9 226 aa11.56□□□□□ -0.56
SMARCAL1-209ENST00000444508 NTN5Q8WTR8 489 aaPredicted RBP11.56□□□□□ -0.56
SMARCAL1-209ENST00000444508 PRELID3AQ96N28 172 aa11.56□□□□□ -0.56
SMARCAL1-209ENST00000444508 TRAV8-4A0A0B4J246 113 aa11.55□□□□□ -0.56
SMARCAL1-209ENST00000444508 TCAPO15273 167 aa11.55□□□□□ -0.56
SMARCAL1-209ENST00000444508 FUSP35637 526 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCAL1-209ENST00000444508 WFDC2Q14508 124 aa11.55□□□□□ -0.56
SMARCAL1-209ENST00000444508 SMIM2Q9BVW6 85 aa11.55□□□□□ -0.56
SMARCAL1-209ENST00000444508 RPS10P5Q9NQ39 176 aa11.55□□□□□ -0.56
SMARCAL1-209ENST00000444508 IGLV5-52A0A0A0MRZ9 124 aa11.54□□□□□ -0.56
SMARCAL1-209ENST00000444508 HLA-DQA1P01909 254 aa11.54□□□□□ -0.56
SMARCAL1-209ENST00000444508 LAMTOR2Q9Y2Q5 125 aa11.54□□□□□ -0.56
SMARCAL1-209ENST00000444508 HERC2O95714 4834 aa11.54□□□□□ -0.56
SMARCAL1-209ENST00000444508 IGLV10-54A0A075B6I4 117 aa11.53□□□□□ -0.56
SMARCAL1-209ENST00000444508 APOC3P02656 99 aa11.53□□□□□ -0.56
SMARCAL1-209ENST00000444508 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
SMARCAL1-209ENST00000444508 OR5A1Q8NGJ0 315 aa11.53□□□□□ -0.56
SMARCAL1-209ENST00000444508 RYR1P21817 5038 aa11.52□□□□□ -0.56
SMARCAL1-209ENST00000444508 IGKV3OR2-268A0A0C4DH90 116 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms