RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 TMEM250H0YL14 139 aa10.51□□□□□ -0.73
CTDSP1-204ENST00000443891 NTF3P20783 257 aa10.51□□□□□ -0.73
CTDSP1-204ENST00000443891 LYZL1Q6UWQ5 148 aa10.51□□□□□ -0.73
CTDSP1-204ENST00000443891 SDIM1Q6ZPB5 146 aa10.51□□□□□ -0.73
CTDSP1-204ENST00000443891 C20orf203Q8NBC4 194 aa10.51□□□□□ -0.73
CTDSP1-204ENST00000443891 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.5□□□□□ -0.73
CTDSP1-204ENST00000443891 UBE2L6O14933 153 aa10.5□□□□□ -0.73
CTDSP1-204ENST00000443891 CTRLP40313 264 aa10.5□□□□□ -0.73
CTDSP1-204ENST00000443891 COTL1Q14019 142 aa10.5□□□□□ -0.73
CTDSP1-204ENST00000443891 CLPSL2Q6UWE3 100 aa10.5□□□□□ -0.73
CTDSP1-204ENST00000443891 SMIM15Q7Z3B0 74 aa10.5□□□□□ -0.73
CTDSP1-204ENST00000443891 AP5S1Q9NUS5 200 aa10.5□□□□□ -0.73
CTDSP1-204ENST00000443891 CIRBPQ14011 172 aaKnown RBP10.49□□□□□ -0.73
CTDSP1-204ENST00000443891 RNF185Q96GF1 192 aa10.49□□□□□ -0.73
CTDSP1-204ENST00000443891 RPP21Q9H633 154 aaKnown RBP10.49□□□□□ -0.73
CTDSP1-204ENST00000443891 TRBV20OR9-2A0A075B6H5 130 aa10.48□□□□□ -0.73
CTDSP1-204ENST00000443891 NUDT10Q8NFP7 164 aa10.48□□□□□ -0.73
CTDSP1-204ENST00000443891 BORCS7Q96B45 105 aa10.48□□□□□ -0.73
CTDSP1-204ENST00000443891 NUDT11Q96G61 164 aa10.48□□□□□ -0.73
CTDSP1-204ENST00000443891 IGLV4-60A0A075B6I1 120 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 IGHV3-64A0A075B6Q5 118 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 hDV102S1A0JD36 115 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 NCR2O95944 276 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 AMTP48728 403 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 TWIST1Q15672 202 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 CFAP161Q6P656 301 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 TEX261Q6UWH6 196 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 OCC1Q8TAD7 63 aa10.47□□□□□ -0.73
CTDSP1-204ENST00000443891 H7C423 109 aa10.46□□□□□ -0.73
CTDSP1-204ENST00000443891 GATCO43716 136 aaKnown RBP10.46□□□□□ -0.73
CTDSP1-204ENST00000443891 FAM210AQ96ND0 272 aa10.46□□□□□ -0.73
CTDSP1-204ENST00000443891 SMIM7Q9BQ49 75 aa10.46□□□□□ -0.73
CTDSP1-204ENST00000443891 RNASE7Q9H1E1 156 aaKnown RBP10.46□□□□□ -0.73
CTDSP1-204ENST00000443891 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.46□□□□□ -0.73
CTDSP1-204ENST00000443891 LYPD6BQ8NI32 183 aa10.45□□□□□ -0.74
CTDSP1-204ENST00000443891 ZNF727A8MUV8 499 aa10.44□□□□□ -0.74
CTDSP1-204ENST00000443891 A8MWL6 223 aa10.44□□□□□ -0.74
CTDSP1-204ENST00000443891 Q6ZRU5 148 aa10.43□□□□□ -0.74
CTDSP1-204ENST00000443891 GATD1Q8NB37 220 aa10.43□□□□□ -0.74
CTDSP1-204ENST00000443891 GFRA4Q9GZZ7 299 aa10.43□□□□□ -0.74
CTDSP1-204ENST00000443891 LRP1Q07954 4544 aaKnown RBP10.42□□□□□ -0.74
CTDSP1-204ENST00000443891 PANO1I0J062 215 aa10.41□□□□□ -0.74
CTDSP1-204ENST00000443891 K7EN84 100 aa10.41□□□□□ -0.74
CTDSP1-204ENST00000443891 NDUFS6O75380 124 aaKnown RBP10.41□□□□□ -0.74
CTDSP1-204ENST00000443891 PEA15Q15121 130 aa10.41□□□□□ -0.74
CTDSP1-204ENST00000443891 AMMECR1LQ6DCA0 310 aa10.41□□□□□ -0.74
CTDSP1-204ENST00000443891 FAM231DQ6ZW35 169 aa10.41□□□□□ -0.74
CTDSP1-204ENST00000443891 DPH3Q96FX2 82 aa10.41□□□□□ -0.74
CTDSP1-204ENST00000443891 SLPIP03973 132 aa10.4□□□□□ -0.74
CTDSP1-204ENST00000443891 ZNF25P17030 456 aaPredicted RBP10.4□□□□□ -0.74
CTDSP1-204ENST00000443891 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.74
CTDSP1-204ENST00000443891 FAM74A3Q4VXF1 159 aa10.4□□□□□ -0.74
CTDSP1-204ENST00000443891 CT83Q5H943 113 aa10.4□□□□□ -0.74
CTDSP1-204ENST00000443891 SPACA4Q8TDM5 124 aa10.4□□□□□ -0.74
CTDSP1-204ENST00000443891 GAGE12HA6NDE8 117 aa10.39□□□□□ -0.75
CTDSP1-204ENST00000443891 APCSP02743 223 aa10.39□□□□□ -0.75
CTDSP1-204ENST00000443891 RPS10P46783 165 aaKnown RBP10.39□□□□□ -0.75
CTDSP1-204ENST00000443891 PLAC8Q9NZF1 115 aa10.39□□□□□ -0.75
CTDSP1-204ENST00000443891 PKIGQ9Y2B9 76 aa10.39□□□□□ -0.75
CTDSP1-204ENST00000443891 A0A087WYN8 130 aa10.38□□□□□ -0.75
CTDSP1-204ENST00000443891 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
CTDSP1-204ENST00000443891 SDHAF1A6NFY7 115 aa10.38□□□□□ -0.75
CTDSP1-204ENST00000443891 SRP19P09132 144 aaKnown RBP10.38□□□□□ -0.75
CTDSP1-204ENST00000443891 HNRNPA3P51991 378 aaKnown RBP10.38□□□□□ -0.75
CTDSP1-204ENST00000443891 TMEM241Q24JQ0 296 aa10.38□□□□□ -0.75
CTDSP1-204ENST00000443891 C15orf56Q8N910 161 aa10.38□□□□□ -0.75
CTDSP1-204ENST00000443891 GTSF1Q8WW33 167 aa10.38□□□□□ -0.75
CTDSP1-204ENST00000443891 FAT3Q8TDW7 4589 aa10.38□□□□□ -0.75
CTDSP1-204ENST00000443891 TRAV26-2A0A0B4J265 109 aa10.37□□□□□ -0.75
CTDSP1-204ENST00000443891 I3L3M4 83 aa10.37□□□□□ -0.75
CTDSP1-204ENST00000443891 RAB14P61106 215 aa10.37□□□□□ -0.75
CTDSP1-204ENST00000443891 LINC01551Q86U37 167 aa10.37□□□□□ -0.75
CTDSP1-204ENST00000443891 CHCHD10Q8WYQ3 142 aaPredicted RBP10.37□□□□□ -0.75
CTDSP1-204ENST00000443891 PLA2G2DQ9UNK4 145 aa10.37□□□□□ -0.75
CTDSP1-204ENST00000443891 GVQW2A0A096LPI5 108 aaPredicted RBP10.36□□□□□ -0.75
CTDSP1-204ENST00000443891 FGF6P10767 208 aa10.36□□□□□ -0.75
CTDSP1-204ENST00000443891 RNASEKQ6P5S7 137 aaKnown RBP10.36□□□□□ -0.75
CTDSP1-204ENST00000443891 OR5A1Q8NGJ0 315 aa10.36□□□□□ -0.75
CTDSP1-204ENST00000443891 C7orf33Q8WU49 177 aa10.36□□□□□ -0.75
CTDSP1-204ENST00000443891 BTF3L4Q96K17 158 aa10.36□□□□□ -0.75
CTDSP1-204ENST00000443891 FAM231BA6NCW3 169 aa10.35□□□□□ -0.75
CTDSP1-204ENST00000443891 PMCHP20382 165 aa10.35□□□□□ -0.75
CTDSP1-204ENST00000443891 TSKUQ8WUA8 353 aa10.35□□□□□ -0.75
CTDSP1-204ENST00000443891 RPL39LQ96EH5 51 aaKnown RBP10.35□□□□□ -0.75
CTDSP1-204ENST00000443891 TMEM101Q96IK0 257 aa10.35□□□□□ -0.75
CTDSP1-204ENST00000443891 SMDT1Q9H4I9 107 aa10.35□□□□□ -0.75
CTDSP1-204ENST00000443891 OSTCQ9NRP0 149 aa10.35□□□□□ -0.75
CTDSP1-204ENST00000443891 LINC00474Q9P2X8 69 aa10.35□□□□□ -0.75
CTDSP1-204ENST00000443891 A0A1B0GUT8 65 aa10.34□□□□□ -0.75
CTDSP1-204ENST00000443891 HIGD1CA8MV81 97 aa10.34□□□□□ -0.75
CTDSP1-204ENST00000443891 ADIRFQ15847 76 aa10.34□□□□□ -0.75
CTDSP1-204ENST00000443891 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.33□□□□□ -0.76
CTDSP1-204ENST00000443891 IGKV3OR2-268A0A0C4DH90 116 aa10.33□□□□□ -0.76
CTDSP1-204ENST00000443891 IGKV2-29A2NJV5 120 aaPredicted RBP10.33□□□□□ -0.76
CTDSP1-204ENST00000443891 COX6A2Q02221 97 aa10.33□□□□□ -0.76
CTDSP1-204ENST00000443891 RIGQ13278 110 aa10.33□□□□□ -0.76
CTDSP1-204ENST00000443891 TMEM191AQ9H0A3 160 aa10.33□□□□□ -0.76
CTDSP1-204ENST00000443891 ST20Q9HBF5 79 aa10.33□□□□□ -0.76
CTDSP1-204ENST00000443891 NAT8Q9UHE5 227 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms