RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 K7EP13 123 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 K7EQD1 137 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 TSHBP01222 138 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 IGKV3-20P01619 116 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 MGPP08493 103 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 SPART-AS1P0CW21 52 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 P0DMU3 169 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 FAM231AP0DMU4 169 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 FAM231CP0DMU5 169 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 LINC00694P0DN24 101 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 IGLL1P15814 213 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 NMUP48645 174 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 UBE2D3P61077 147 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 HERVK_113P61574 105 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 UBE2D2P62837 147 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 KRTAP21-3Q3LHN1 58 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 KRTAP24-1Q3LI83 254 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 KPRPQ5T749 579 aaPredicted RBP2.02□□□□□ -2.09
LINC00393-201ENST00000443621 SAMD5Q5TGI4 173 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 FAM74A4Q5TZK3 123 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 C11orf44Q8N8P7 122 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 MUC7Q8TAX7 377 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 BAALCQ8WXS3 180 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 RPL39LQ96EH5 51 aaKnown RBP2.02□□□□□ -2.09
LINC00393-201ENST00000443621 CST9LQ9H4G1 147 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 XCL2Q9UBD3 114 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 PRO0255Q9UI72 69 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 PAM16Q9Y3D7 125 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 X6R8D5 127 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 NOTCH2Q04721 2471 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 C2CD3Q4AC94 2353 aa2.02□□□□□ -2.09
LINC00393-201ENST00000443621 IGLV4-3A0A075B6K6 122 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 TRBV25-1A0A075B6N4 114 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 TRGV2A0A075B6R0 118 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 IGLV5-45A0A087WSX0 123 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 A0A087WWL8 130 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 TRGV1A0A0A0MS02 117 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 MUC21A0A0G2JKD1 596 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 A0A0J9YXY3 114 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 MUC21A0A140T8X8 626 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 TINCRA0A1B0GVN0 87 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 GAS8-AS1O95177 125 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 ATP5G1P05496 136 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 HNRNPA3P51991 378 aaKnown RBP2.01□□□□□ -2.09
LINC00393-201ENST00000443621 PTTG1IPP53801 180 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 HERVK_113P63121 156 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 FHL2Q14192 279 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 COL5A1-AS1Q5SY13 56 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 LCE2DQ5TA82 110 aaPredicted RBP2.01□□□□□ -2.09
LINC00393-201ENST00000443621 SBSPONQ8IVN8 264 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 SLC25A29Q8N8R3 303 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 OR11H2Q8NH07 326 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 COPS9Q8WXC6 57 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 PLEKHB2Q96CS7 222 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 C14orf144Q96I85 54 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 TM2D2Q9BX73 214 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 CDIP1Q9H305 208 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 GEMIN7Q9H840 131 aaKnown RBP2.01□□□□□ -2.09
LINC00393-201ENST00000443621 JPT2Q9H910 190 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 SPANXB1Q9NS25 103 aaPredicted RBP2.01□□□□□ -2.09
LINC00393-201ENST00000443621 DKK2Q9UBU2 259 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 TP73-AS1Q9UF72 201 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 UBE2D4Q9Y2X8 147 aa2.01□□□□□ -2.09
LINC00393-201ENST00000443621 TRBV6-8A0A0A6YYG3 113 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 TRGV4A0A0C4DH28 118 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 A6NDN8 102 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 PRSS29PA6NIE9 313 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 H3BRM9 83 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 TIMM17BO60830 172 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 IGHV4-30-4P0DP06 118 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 FGF6P10767 208 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 HTN1P15515 57 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 FXYD7P58549 80 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 HSD52Q0P140 79 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE1Q13065 139 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 MRPL23Q16540 153 aaKnown RBP2□□□□□ -2.09
LINC00393-201ENST00000443621 ZC2HC1BQ5TFG8 222 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 Q6ZTI0 123 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 LINC00173Q6ZV60 143 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 Q8NAQ8 132 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 ZNRF2Q8NHG8 242 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 SPATA3Q8NHX4 192 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 TMEM101Q96IK0 257 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 TMEM243Q9BU79 118 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 NOP10Q9NPE3 64 aaKnown RBP2□□□□□ -2.09
LINC00393-201ENST00000443621 CDC42SE2Q9NRR3 84 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 MRPL35Q9NZE8 188 aaKnown RBP2□□□□□ -2.09
LINC00393-201ENST00000443621 TENM1Q9UKZ4 2725 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 F8P00451 2351 aa2□□□□□ -2.09
LINC00393-201ENST00000443621 VWFP04275 2813 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 WNK1Q9H4A3 2382 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 IGLV4-69A0A075B6H9 119 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 TRAV8-4A0A0B4J246 113 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 IGHV1-58A0A0C4DH39 117 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 IGLV5-39A0A0G2JS06 123 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 MYMXA0A1B0GTQ4 84 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 TMEM223A0PJW6 202 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE12BA1L429 117 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 USP17L23D6RBM5 183 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 UBE2L6O14933 153 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms