RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 GAGE6Q13070 117 aa10.77□□□□□ -0.69
USP39-205ENST00000442708 C10orf126Q8N4M7 172 aa10.77□□□□□ -0.69
USP39-205ENST00000442708 FAT2Q9NYQ8 4349 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 TRBV24-1A0A075B6N3 115 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 TRBV27A0A0K0K1C4 114 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 TMEM262E9PQX1 116 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 I3L3M4 83 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 TNFRSF6BO95407 300 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 PMCHP20382 165 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 S100PP25815 95 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 AMTP48728 403 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 SUMO2P61956 95 aaKnown RBP10.76□□□□□ -0.69
USP39-205ENST00000442708 TNP2Q05952 138 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 Q8N976 141 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 TMEM243Q9BU79 118 aa10.76□□□□□ -0.69
USP39-205ENST00000442708 A0A087WX48 190 aa10.75□□□□□ -0.69
USP39-205ENST00000442708 PRSS29PA6NIE9 313 aa10.75□□□□□ -0.69
USP39-205ENST00000442708 BTF3P20290 206 aaKnown RBP10.75□□□□□ -0.69
USP39-205ENST00000442708 LINC00336Q6ZUF6 198 aa10.75□□□□□ -0.69
USP39-205ENST00000442708 CHCHD7Q9BUK0 85 aa10.75□□□□□ -0.69
USP39-205ENST00000442708 KLK12Q9UKR0 248 aa10.75□□□□□ -0.69
USP39-205ENST00000442708 PPP1R17O96001 155 aa10.74□□□□□ -0.69
USP39-205ENST00000442708 RBX1P62877 108 aa10.74□□□□□ -0.69
USP39-205ENST00000442708 ORMDL3Q8N138 153 aa10.74□□□□□ -0.69
USP39-205ENST00000442708 Q9HAA7 133 aa10.74□□□□□ -0.69
USP39-205ENST00000442708 TGIF2-C20orf24A0A0A6YYL0 155 aa10.73□□□□□ -0.69
USP39-205ENST00000442708 A0A1B0GVY2 172 aa10.73□□□□□ -0.69
USP39-205ENST00000442708 VCYO14598 125 aa10.73□□□□□ -0.69
USP39-205ENST00000442708 PPBPP02775 128 aa10.73□□□□□ -0.69
USP39-205ENST00000442708 PRELID3AQ96N28 172 aa10.73□□□□□ -0.69
USP39-205ENST00000442708 C20orf78Q9BR46 151 aa10.73□□□□□ -0.69
USP39-205ENST00000442708 IGLV4-60A0A075B6I1 120 aa10.72□□□□□ -0.69
USP39-205ENST00000442708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.72□□□□□ -0.69
USP39-205ENST00000442708 IGKV2-29A2NJV5 120 aaPredicted RBP10.72□□□□□ -0.69
USP39-205ENST00000442708 APCSP02743 223 aa10.72□□□□□ -0.69
USP39-205ENST00000442708 ESDP10768 282 aa10.72□□□□□ -0.69
USP39-205ENST00000442708 LAGE3Q14657 143 aa10.72□□□□□ -0.69
USP39-205ENST00000442708 ELOBQ15370 118 aa10.72□□□□□ -0.69
USP39-205ENST00000442708 KIAA1644Q3SXP7 199 aa10.72□□□□□ -0.69
USP39-205ENST00000442708 YPEL4Q96NS1 127 aa10.72□□□□□ -0.69
USP39-205ENST00000442708 PKD1P98161 4303 aa10.72□□□□□ -0.69
USP39-205ENST00000442708 PHOX2AO14813 284 aa10.71□□□□□ -0.69
USP39-205ENST00000442708 ANGP03950 147 aaKnown RBP10.71□□□□□ -0.69
USP39-205ENST00000442708 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
USP39-205ENST00000442708 ENHOQ6UWT2 76 aa10.71□□□□□ -0.69
USP39-205ENST00000442708 C20orf203Q8NBC4 194 aa10.71□□□□□ -0.69
USP39-205ENST00000442708 SMIM2Q9BVW6 85 aa10.71□□□□□ -0.69
USP39-205ENST00000442708 PKIAP61925 76 aa10.7□□□□□ -0.7
USP39-205ENST00000442708 NFE4Q86UQ8 179 aa10.7□□□□□ -0.7
USP39-205ENST00000442708 GNB1LQ9BYB4 327 aa10.7□□□□□ -0.7
USP39-205ENST00000442708 HECTD4Q9Y4D8 3996 aa10.7□□□□□ -0.7
USP39-205ENST00000442708 A0A1B0GUV1 79 aa10.69□□□□□ -0.7
USP39-205ENST00000442708 HLA-DQA1P01909 254 aa10.69□□□□□ -0.7
USP39-205ENST00000442708 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
USP39-205ENST00000442708 PRSS47A8MTI9 375 aa10.68□□□□□ -0.7
USP39-205ENST00000442708 UBE2L6O14933 153 aa10.68□□□□□ -0.7
USP39-205ENST00000442708 CLPSL2Q6UWE3 100 aa10.68□□□□□ -0.7
USP39-205ENST00000442708 CBLN2Q8IUK8 224 aa10.68□□□□□ -0.7
USP39-205ENST00000442708 LINC00269Q8N2A0 174 aa10.68□□□□□ -0.7
USP39-205ENST00000442708 KIR2DL4Q99706 377 aa10.68□□□□□ -0.7
USP39-205ENST00000442708 PRR34Q9NV39 138 aa10.68□□□□□ -0.7
USP39-205ENST00000442708 DNAH11Q96DT5 4516 aa10.67□□□□□ -0.7
USP39-205ENST00000442708 TRAV8-3A0A0A6YYJ7 113 aa10.67□□□□□ -0.7
USP39-205ENST00000442708 TCAPO15273 167 aa10.67□□□□□ -0.7
USP39-205ENST00000442708 FGF6P10767 208 aa10.67□□□□□ -0.7
USP39-205ENST00000442708 FCER1GP30273 86 aa10.67□□□□□ -0.7
USP39-205ENST00000442708 MAPKAPK5-AS1Q8N8E1 139 aa10.67□□□□□ -0.7
USP39-205ENST00000442708 MRPL18Q9H0U6 180 aaKnown RBP10.67□□□□□ -0.7
USP39-205ENST00000442708 LAMTOR2Q9Y2Q5 125 aa10.67□□□□□ -0.7
USP39-205ENST00000442708 LOC389332A0A1B0GUA5 103 aa10.66□□□□□ -0.7
USP39-205ENST00000442708 H7C423 109 aa10.66□□□□□ -0.7
USP39-205ENST00000442708 COX19Q49B96 90 aa10.66□□□□□ -0.7
USP39-205ENST00000442708 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.7
USP39-205ENST00000442708 ALKBH7Q9BT30 221 aaPredicted RBP10.65□□□□□ -0.7
USP39-205ENST00000442708 MAP1LC3AQ9H492 121 aa10.65□□□□□ -0.7
USP39-205ENST00000442708 MT-ND6P03923 174 aa10.64□□□□□ -0.71
USP39-205ENST00000442708 FABP9Q0Z7S8 132 aa10.64□□□□□ -0.71
USP39-205ENST00000442708 WFDC2Q14508 124 aa10.64□□□□□ -0.71
USP39-205ENST00000442708 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
USP39-205ENST00000442708 RNASEKQ6P5S7 137 aaKnown RBP10.64□□□□□ -0.71
USP39-205ENST00000442708 MRPL52Q86TS9 123 aaKnown RBP10.64□□□□□ -0.71
USP39-205ENST00000442708 IGKV2D-24A0A075B6R9 120 aa10.63□□□□□ -0.71
USP39-205ENST00000442708 A0A087WTM6 91 aa10.63□□□□□ -0.71
USP39-205ENST00000442708 CRPP02741 224 aa10.63□□□□□ -0.71
USP39-205ENST00000442708 RPL39P62891 51 aaKnown RBP10.63□□□□□ -0.71
USP39-205ENST00000442708 REG3AQ06141 175 aa10.63□□□□□ -0.71
USP39-205ENST00000442708 Q0VG73 95 aa10.63□□□□□ -0.71
USP39-205ENST00000442708 KRTAP26-1Q6PEX3 210 aa10.63□□□□□ -0.71
USP39-205ENST00000442708 Q8N8P6 123 aa10.63□□□□□ -0.71
USP39-205ENST00000442708 SMCO4Q9NRQ5 59 aa10.63□□□□□ -0.71
USP39-205ENST00000442708 PSCAO43653 123 aa10.62□□□□□ -0.71
USP39-205ENST00000442708 IFI27P40305 119 aaPredicted RBP10.62□□□□□ -0.71
USP39-205ENST00000442708 KRTAP10-2P60368 255 aa10.62□□□□□ -0.71
USP39-205ENST00000442708 TM2D2Q9BX73 214 aa10.62□□□□□ -0.71
USP39-205ENST00000442708 UBE2D4Q9Y2X8 147 aa10.62□□□□□ -0.71
USP39-205ENST00000442708 TRAPPC1Q9Y5R8 145 aa10.62□□□□□ -0.71
USP39-205ENST00000442708 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
USP39-205ENST00000442708 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP39-205ENST00000442708 MIAQ16674 131 aa10.61□□□□□ -0.71
USP39-205ENST00000442708 FAM104AQ969W3 186 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms