RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SPXQ9BT56 116 aa12.08□□□□□ -0.48
SEMA3B-207ENST00000441915 BEX4Q9NWD9 120 aaPredicted RBP12.08□□□□□ -0.48
SEMA3B-207ENST00000441915 H3BMM0 161 aa12.07□□□□□ -0.48
SEMA3B-207ENST00000441915 NHLRC4P0CG21 123 aaPredicted RBP12.07□□□□□ -0.48
SEMA3B-207ENST00000441915 PIEZO1Q92508 2521 aa12.07□□□□□ -0.48
SEMA3B-207ENST00000441915 IGSF10Q6WRI0 2623 aa12.07□□□□□ -0.48
SEMA3B-207ENST00000441915 M0R2P5 195 aa12.07□□□□□ -0.48
SEMA3B-207ENST00000441915 MUSTN1Q8IVN3 82 aa12.06□□□□□ -0.48
SEMA3B-207ENST00000441915 RAX2Q96IS3 184 aa12.06□□□□□ -0.48
SEMA3B-207ENST00000441915 ACACBO00763 2458 aa12.06□□□□□ -0.48
SEMA3B-207ENST00000441915 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
SEMA3B-207ENST00000441915 MRPS36P82909 103 aaKnown RBP12.06□□□□□ -0.48
SEMA3B-207ENST00000441915 TIMM21Q9BVV7 248 aa12.06□□□□□ -0.48
SEMA3B-207ENST00000441915 A0A0B4J2C4 111 aa12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 A0A0J9YXY3 114 aa12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 A8MTW9 85 aa12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 FSHBP01225 129 aa12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 ZNF415Q09FC8 603 aa12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 C18orf65Q6ZTR6 163 aa12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 CITED1Q99966 193 aa12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 MXRA5Q9NR99 2828 aa12.05□□□□□ -0.48
SEMA3B-207ENST00000441915 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
SEMA3B-207ENST00000441915 PRM2P04554 102 aa12.04□□□□□ -0.48
SEMA3B-207ENST00000441915 PIK3CD-AS1Q5SR53 167 aa12.04□□□□□ -0.48
SEMA3B-207ENST00000441915 CEMP1Q6PRD7 247 aaPredicted RBP12.04□□□□□ -0.48
SEMA3B-207ENST00000441915 TMEM263Q8WUH6 116 aaKnown RBP12.04□□□□□ -0.48
SEMA3B-207ENST00000441915 POLQO75417 2590 aa12.04□□□□□ -0.48
SEMA3B-207ENST00000441915 SBSPONQ8IVN8 264 aa12.04□□□□□ -0.48
SEMA3B-207ENST00000441915 FAM104AQ969W3 186 aa12.04□□□□□ -0.48
SEMA3B-207ENST00000441915 PEMTQ9UBM1 199 aa12.04□□□□□ -0.48
SEMA3B-207ENST00000441915 RBMY1BA6NDE4 496 aaKnown RBP12.03□□□□□ -0.48
SEMA3B-207ENST00000441915 RBMY1EA6NEQ0 496 aaKnown RBP12.03□□□□□ -0.48
SEMA3B-207ENST00000441915 RBMY1DP0C7P1 496 aaKnown RBP12.03□□□□□ -0.48
SEMA3B-207ENST00000441915 TMEM61Q8N0U2 210 aa12.03□□□□□ -0.48
SEMA3B-207ENST00000441915 SMIM20Q8N5G0 67 aa12.03□□□□□ -0.48
SEMA3B-207ENST00000441915 CACNA1AO00555 2505 aa12.03□□□□□ -0.48
SEMA3B-207ENST00000441915 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 GAGE12JA6NER3 117 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 H7C2G1 150 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 GAGE7O76087 117 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 GAGE12FP0CL80 117 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 GAGE12GP0CL81 117 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 GAGE12IP0CL82 117 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 GAGE4Q13068 117 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 RNASE13Q5GAN3 156 aaKnown RBP12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 TRAV8-3A0A0A6YYJ7 113 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 IGHV4-31P0DP07 118 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 SPANXA1Q9NS26 97 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 Q9UF83 564 aa12.02□□□□□ -0.49
SEMA3B-207ENST00000441915 NACAE9PAV3 2078 aa12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 ADARB2-AS1A8MUL3 147 aa12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 LINC01587Q99440 93 aa12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 NDUFV3P56181 108 aaKnown RBP12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 Q1RN00 199 aa12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 Q6ZSN1 163 aa12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 UBE2D4Q9Y2X8 147 aa12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 FAM208BQ5VWN6 2430 aa12.01□□□□□ -0.49
SEMA3B-207ENST00000441915 TINCRA0A1B0GVN0 87 aa12□□□□□ -0.49
SEMA3B-207ENST00000441915 KHDC1LQ5JSQ8 128 aa12□□□□□ -0.49
SEMA3B-207ENST00000441915 FBN2P35556 2912 aa12□□□□□ -0.49
SEMA3B-207ENST00000441915 GAGE2BQ13066 116 aa12□□□□□ -0.49
SEMA3B-207ENST00000441915 GAGE2EQ4V326 116 aa12□□□□□ -0.49
SEMA3B-207ENST00000441915 DYNLRB2Q8TF09 96 aa12□□□□□ -0.49
SEMA3B-207ENST00000441915 MAP6D1Q9H9H5 199 aa12□□□□□ -0.49
SEMA3B-207ENST00000441915 GAGE2DQ9UEU5 116 aa12□□□□□ -0.49
SEMA3B-207ENST00000441915 CENPEQ02224 2701 aa11.99□□□□□ -0.49
SEMA3B-207ENST00000441915 CCDC179H3BU77 68 aa11.99□□□□□ -0.49
SEMA3B-207ENST00000441915 SLC25A20O43772 301 aa11.99□□□□□ -0.49
SEMA3B-207ENST00000441915 PRSS2P07478 247 aa11.99□□□□□ -0.49
SEMA3B-207ENST00000441915 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.99□□□□□ -0.49
SEMA3B-207ENST00000441915 IGKV2-29A2NJV5 120 aaPredicted RBP11.99□□□□□ -0.49
SEMA3B-207ENST00000441915 Q8N2B8 174 aa11.99□□□□□ -0.49
SEMA3B-207ENST00000441915 ANKRD29Q8N6D5 301 aa11.99□□□□□ -0.49
SEMA3B-207ENST00000441915 NDUFA12Q9UI09 145 aa11.99□□□□□ -0.49
SEMA3B-207ENST00000441915 C9JAW5 83 aa11.98□□□□□ -0.49
SEMA3B-207ENST00000441915 C4orf3Q8WVX3 66 aa11.98□□□□□ -0.49
SEMA3B-207ENST00000441915 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
SEMA3B-207ENST00000441915 DNAJC30Q96LL9 226 aa11.98□□□□□ -0.49
SEMA3B-207ENST00000441915 LITAFQ99732 161 aa11.98□□□□□ -0.49
SEMA3B-207ENST00000441915 IGHV3-53P01767 116 aa11.98□□□□□ -0.49
SEMA3B-207ENST00000441915 C11orf72Q8NBR9 251 aa11.98□□□□□ -0.49
SEMA3B-207ENST00000441915 MYO9AB2RTY4 2548 aa11.98□□□□□ -0.49
SEMA3B-207ENST00000441915 INSP01308 110 aa11.97□□□□□ -0.49
SEMA3B-207ENST00000441915 LINC00467Q9BRT7 94 aa11.97□□□□□ -0.49
SEMA3B-207ENST00000441915 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.49
SEMA3B-207ENST00000441915 SNCGO76070 127 aa11.96□□□□□ -0.49
SEMA3B-207ENST00000441915 TTC32Q5I0X7 151 aa11.96□□□□□ -0.49
SEMA3B-207ENST00000441915 ATXN8Q156A1 80 aa11.96□□□□□ -0.49
SEMA3B-207ENST00000441915 SPANXDQ9BXN6 97 aa11.96□□□□□ -0.49
SEMA3B-207ENST00000441915 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
SEMA3B-207ENST00000441915 M0QXV9 152 aa11.95□□□□□ -0.5
SEMA3B-207ENST00000441915 IFITM1P13164 125 aa11.95□□□□□ -0.5
SEMA3B-207ENST00000441915 CR1P17927 2039 aa11.95□□□□□ -0.5
SEMA3B-207ENST00000441915 DEFB114Q30KQ6 69 aa11.95□□□□□ -0.5
SEMA3B-207ENST00000441915 BEAN1Q3B7T3 259 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms