RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 HIGD1BQ9P298 99 aa9.43□□□□□ -0.9
CPSF4-206ENST00000441580 IGLV4-3A0A075B6K6 122 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 TRBV6-4A0A1B0GX49 114 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 GAGE12BA1L429 117 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 E9PLD3 99 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 GAGE7O76087 117 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 GAGE12FP0CL80 117 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 GAGE12GP0CL81 117 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 GAGE12IP0CL82 117 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 NFE4Q86UQ8 179 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 LURAP1LQ8IV03 231 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 LINC00612Q8N6U2 182 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 SPATA3Q8NHX4 192 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 CHCHD7Q9BUK0 85 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 CUBNO60494 3623 aa9.42□□□□□ -0.9
CPSF4-206ENST00000441580 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
CPSF4-206ENST00000441580 C11orf86A6NJI1 115 aa9.41□□□□□ -0.9
CPSF4-206ENST00000441580 KRTAP24-1Q3LI83 254 aa9.41□□□□□ -0.9
CPSF4-206ENST00000441580 BVES-AS1Q5T3Y7 98 aa9.41□□□□□ -0.9
CPSF4-206ENST00000441580 PCP2Q8IVA1 136 aa9.41□□□□□ -0.9
CPSF4-206ENST00000441580 CHAC1Q9BUX1 264 aa9.41□□□□□ -0.9
CPSF4-206ENST00000441580 TIMM21Q9BVV7 248 aa9.41□□□□□ -0.9
CPSF4-206ENST00000441580 HIVEP1P15822 2718 aa9.41□□□□□ -0.9
CPSF4-206ENST00000441580 TRGV4A0A0C4DH28 118 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 TCTAP57738 103 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 UBE2D3P61077 147 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 UBE2D2P62837 147 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 SEC11AP67812 179 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 MPV17L2Q567V2 206 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 SHISA2Q6UWI4 295 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 ZNRF2Q8NHG8 242 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 PRADC1Q9BSG0 188 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 VCX2Q9H322 139 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 X6R8D5 127 aa9.4□□□□□ -0.9
CPSF4-206ENST00000441580 LYRM9A8MSI8 78 aa9.39□□□□□ -0.91
CPSF4-206ENST00000441580 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
CPSF4-206ENST00000441580 SLC25A29Q8N8R3 303 aa9.39□□□□□ -0.91
CPSF4-206ENST00000441580 DEFB104AQ8WTQ1 72 aa9.39□□□□□ -0.91
CPSF4-206ENST00000441580 PHLDA1Q8WV24 401 aaPredicted RBP9.39□□□□□ -0.91
CPSF4-206ENST00000441580 AMELXQ99217 191 aa9.39□□□□□ -0.91
CPSF4-206ENST00000441580 ZMAT5Q9UDW3 170 aaKnown RBP9.39□□□□□ -0.91
CPSF4-206ENST00000441580 UBE2D4Q9Y2X8 147 aa9.39□□□□□ -0.91
CPSF4-206ENST00000441580 F8P00451 2351 aa9.39□□□□□ -0.91
CPSF4-206ENST00000441580 NF1P21359 2839 aa9.38□□□□□ -0.91
CPSF4-206ENST00000441580 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-206ENST00000441580 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 IGHV3-38A0A0C4DH36 116 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 A6NDN8 102 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 GAGE12JA6NER3 117 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 GAGE1Q13065 139 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 GAGE4Q13068 117 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 GAGE5Q13069 117 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 TAL2Q16559 108 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 GAGE13Q4V321 117 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 TMEM170BQ5T4T1 132 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 C3orf56Q8N813 242 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 GTSF1LQ9H1H1 148 aa9.37□□□□□ -0.91
CPSF4-206ENST00000441580 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
CPSF4-206ENST00000441580 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-206ENST00000441580 MYMXA0A1B0GTQ4 84 aa9.36□□□□□ -0.91
CPSF4-206ENST00000441580 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-206ENST00000441580 H7C423 109 aa9.36□□□□□ -0.91
CPSF4-206ENST00000441580 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
CPSF4-206ENST00000441580 MIFP14174 115 aa9.36□□□□□ -0.91
CPSF4-206ENST00000441580 DEFB135Q30KP9 77 aa9.36□□□□□ -0.91
CPSF4-206ENST00000441580 Q9UF83 564 aa9.36□□□□□ -0.91
CPSF4-206ENST00000441580 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-206ENST00000441580 EMP1P54849 157 aa9.35□□□□□ -0.91
CPSF4-206ENST00000441580 FHL2Q14192 279 aa9.35□□□□□ -0.91
CPSF4-206ENST00000441580 Q6ZUT4 128 aa9.35□□□□□ -0.91
CPSF4-206ENST00000441580 ORAOV1Q8WV07 137 aa9.35□□□□□ -0.91
CPSF4-206ENST00000441580 CSDC2Q9Y534 153 aaKnown RBP9.35□□□□□ -0.91
CPSF4-206ENST00000441580 TEX48A0A1B0GUV7 120 aa9.34□□□□□ -0.91
CPSF4-206ENST00000441580 ZNF815PA8K554 130 aa9.34□□□□□ -0.91
CPSF4-206ENST00000441580 DGAT2L7PQ6IED9 249 aa9.34□□□□□ -0.91
CPSF4-206ENST00000441580 OPRPNQ99935 248 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-206ENST00000441580 TMEM243Q9BU79 118 aa9.34□□□□□ -0.91
CPSF4-206ENST00000441580 TINCRA0A1B0GVN0 87 aa9.33□□□□□ -0.92
CPSF4-206ENST00000441580 TMEM223A0PJW6 202 aa9.33□□□□□ -0.92
CPSF4-206ENST00000441580 UBE2L6O14933 153 aa9.33□□□□□ -0.92
CPSF4-206ENST00000441580 IGHV4-30-4P0DP06 118 aa9.33□□□□□ -0.92
CPSF4-206ENST00000441580 DEFB130BP0DP73 79 aa9.33□□□□□ -0.92
CPSF4-206ENST00000441580 DEFB130AP0DP74 79 aa9.33□□□□□ -0.92
CPSF4-206ENST00000441580 ZNF25P17030 456 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-206ENST00000441580 SBSPONQ8IVN8 264 aa9.33□□□□□ -0.92
CPSF4-206ENST00000441580 PLEKHB2Q96CS7 222 aa9.33□□□□□ -0.92
CPSF4-206ENST00000441580 TTTY13Q9BZ97 58 aa9.33□□□□□ -0.92
CPSF4-206ENST00000441580 IGHV4-28A0A0C4DH34 117 aa9.32□□□□□ -0.92
CPSF4-206ENST00000441580 A0A0J9YXV3 536 aa9.32□□□□□ -0.92
CPSF4-206ENST00000441580 LEPROTO15243 131 aa9.32□□□□□ -0.92
CPSF4-206ENST00000441580 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
CPSF4-206ENST00000441580 EGFEM1PQ0D2K5 195 aa9.32□□□□□ -0.92
CPSF4-206ENST00000441580 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
CPSF4-206ENST00000441580 COX11Q9Y6N1 276 aa9.32□□□□□ -0.92
CPSF4-206ENST00000441580 JMJD1CQ15652 2540 aa9.31□□□□□ -0.92
CPSF4-206ENST00000441580 A8MZ25 164 aa9.31□□□□□ -0.92
CPSF4-206ENST00000441580 AMMECR1LQ6DCA0 310 aa9.31□□□□□ -0.92
CPSF4-206ENST00000441580 MAPKAPK5-AS1Q8N8E1 139 aa9.31□□□□□ -0.92
CPSF4-206ENST00000441580 Q8NAQ8 132 aa9.31□□□□□ -0.92
CPSF4-206ENST00000441580 OR5A1Q8NGJ0 315 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms