RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 IGHV4-30-2A0A087WSY4 118 aa12.5□□□□□ -0.41
PMS1-213ENST00000441310 SUMO4Q6EEV6 95 aa12.5□□□□□ -0.41
PMS1-213ENST00000441310 SPXQ9BT56 116 aa12.5□□□□□ -0.41
PMS1-213ENST00000441310 ZFAND2AQ8N6M9 145 aa12.49□□□□□ -0.41
PMS1-213ENST00000441310 SMCR5Q8TEV8 140 aa12.49□□□□□ -0.41
PMS1-213ENST00000441310 DUX5Q96PT3 197 aa12.49□□□□□ -0.41
PMS1-213ENST00000441310 PRRC2AP48634 2157 aaKnown RBP12.49□□□□□ -0.41
PMS1-213ENST00000441310 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
PMS1-213ENST00000441310 I3L3M4 83 aa12.49□□□□□ -0.41
PMS1-213ENST00000441310 LST1O00453 97 aa12.49□□□□□ -0.41
PMS1-213ENST00000441310 RNASE3P12724 160 aaKnown RBP12.49□□□□□ -0.41
PMS1-213ENST00000441310 SONP18583 2426 aaKnown RBP12.48□□□□□ -0.41
PMS1-213ENST00000441310 IGHV4-38-2P0DP08 117 aa12.48□□□□□ -0.41
PMS1-213ENST00000441310 ADAMTSL4-AS1Q5T5F5 129 aa12.48□□□□□ -0.41
PMS1-213ENST00000441310 FAM74A4Q5TZK3 123 aa12.48□□□□□ -0.41
PMS1-213ENST00000441310 TRAV12-3A0A0B4J271 114 aa12.47□□□□□ -0.41
PMS1-213ENST00000441310 DEFB121Q5J5C9 76 aa12.47□□□□□ -0.41
PMS1-213ENST00000441310 MAPK1IP1LQ8NDC0 245 aa12.47□□□□□ -0.41
PMS1-213ENST00000441310 LINC00526Q96FQ7 95 aa12.47□□□□□ -0.41
PMS1-213ENST00000441310 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
PMS1-213ENST00000441310 LINC00315P59091 139 aa12.47□□□□□ -0.41
PMS1-213ENST00000441310 FBN2P35556 2912 aa12.46□□□□□ -0.41
PMS1-213ENST00000441310 F6UB75 175 aa12.46□□□□□ -0.41
PMS1-213ENST00000441310 LRRC75A-AS1Q8N1F1 130 aa12.46□□□□□ -0.41
PMS1-213ENST00000441310 BBC3Q96PG8 261 aaPredicted RBP12.46□□□□□ -0.41
PMS1-213ENST00000441310 IGHV3-30-3P0DP02 117 aa12.46□□□□□ -0.42
PMS1-213ENST00000441310 GAGE2AQ6NT46 116 aa12.46□□□□□ -0.42
PMS1-213ENST00000441310 MRPL53Q96EL3 112 aaKnown RBP12.46□□□□□ -0.42
PMS1-213ENST00000441310 IMUPQ9GZP8 106 aa12.45□□□□□ -0.42
PMS1-213ENST00000441310 MYO9AB2RTY4 2548 aa12.45□□□□□ -0.42
PMS1-213ENST00000441310 C10orf105Q8TEF2 133 aa12.45□□□□□ -0.42
PMS1-213ENST00000441310 LITAFQ99732 161 aa12.45□□□□□ -0.42
PMS1-213ENST00000441310 KIF25-AS1Q9Y6Z4 181 aa12.45□□□□□ -0.42
PMS1-213ENST00000441310 IGKV3-7A0A075B6H7 116 aa12.45□□□□□ -0.42
PMS1-213ENST00000441310 IGHV4OR15-8A0A075B7B6 117 aa12.44□□□□□ -0.42
PMS1-213ENST00000441310 A0A087WW49 117 aa12.44□□□□□ -0.42
PMS1-213ENST00000441310 A8MZ25 164 aa12.43□□□□□ -0.42
PMS1-213ENST00000441310 CCDC140Q96MF4 163 aa12.43□□□□□ -0.42
PMS1-213ENST00000441310 TIMM21Q9BVV7 248 aa12.43□□□□□ -0.42
PMS1-213ENST00000441310 IGHV1-69P01742 117 aa12.43□□□□□ -0.42
PMS1-213ENST00000441310 DAND5Q8N907 189 aa12.43□□□□□ -0.42
PMS1-213ENST00000441310 hADV29S1A0JD25 119 aa12.43□□□□□ -0.42
PMS1-213ENST00000441310 LINC00477Q96M19 166 aa12.43□□□□□ -0.42
PMS1-213ENST00000441310 LINC00643Q86TS7 51 aa12.42□□□□□ -0.42
PMS1-213ENST00000441310 C5orf56Q8N8D9 126 aa12.42□□□□□ -0.42
PMS1-213ENST00000441310 FAM110DQ8TAY7 271 aaPredicted RBP12.42□□□□□ -0.42
PMS1-213ENST00000441310 A0A0J9YX75 114 aa12.41□□□□□ -0.42
PMS1-213ENST00000441310 COX7CP15954 63 aa12.41□□□□□ -0.42
PMS1-213ENST00000441310 AVPP01185 164 aa12.41□□□□□ -0.42
PMS1-213ENST00000441310 OR13C6PQ8NH95 151 aa12.41□□□□□ -0.42
PMS1-213ENST00000441310 LENEPQ9Y5L5 61 aa12.41□□□□□ -0.42
PMS1-213ENST00000441310 H3BUX3 64 aa12.41□□□□□ -0.42
PMS1-213ENST00000441310 ACYP1P07311 99 aa12.41□□□□□ -0.42
PMS1-213ENST00000441310 RPL11P62913 178 aaKnown RBP12.41□□□□□ -0.42
PMS1-213ENST00000441310 RHOHQ15669 191 aa12.41□□□□□ -0.42
PMS1-213ENST00000441310 NDUFA12Q9UI09 145 aa12.41□□□□□ -0.42
PMS1-213ENST00000441310 SETD2Q9BYW2 2564 aaPredicted RBP12.4□□□□□ -0.42
PMS1-213ENST00000441310 TRBV27A0A0K0K1C4 114 aa12.4□□□□□ -0.42
PMS1-213ENST00000441310 PF4V1P10720 104 aa12.4□□□□□ -0.42
PMS1-213ENST00000441310 RNASE13Q5GAN3 156 aaKnown RBP12.4□□□□□ -0.42
PMS1-213ENST00000441310 TEX15Q9BXT5 2789 aa12.4□□□□□ -0.42
PMS1-213ENST00000441310 SORL1Q92673 2214 aa12.4□□□□□ -0.42
PMS1-213ENST00000441310 A0A1B0GX51 115 aa12.4□□□□□ -0.42
PMS1-213ENST00000441310 RS1O15537 224 aa12.4□□□□□ -0.42
PMS1-213ENST00000441310 C9orf139Q6ZV77 190 aa12.4□□□□□ -0.42
PMS1-213ENST00000441310 TMEM61Q8N0U2 210 aa12.4□□□□□ -0.42
PMS1-213ENST00000441310 BLCAPP62952 87 aa12.39□□□□□ -0.43
PMS1-213ENST00000441310 CYSTM1Q9H1C7 97 aa12.39□□□□□ -0.43
PMS1-213ENST00000441310 IGHV3-11P01762 117 aa12.39□□□□□ -0.43
PMS1-213ENST00000441310 MED14OSP0DP75 135 aa12.39□□□□□ -0.43
PMS1-213ENST00000441310 MIAQ16674 131 aa12.39□□□□□ -0.43
PMS1-213ENST00000441310 KIR2DL5BQ8NHK3 375 aa12.38□□□□□ -0.43
PMS1-213ENST00000441310 NACAE9PAV3 2078 aa12.38□□□□□ -0.43
PMS1-213ENST00000441310 IGLV4-3A0A075B6K6 122 aa12.38□□□□□ -0.43
PMS1-213ENST00000441310 TRAV25A0A0B4J276 109 aa12.38□□□□□ -0.43
PMS1-213ENST00000441310 MSMBP08118 114 aa12.37□□□□□ -0.43
PMS1-213ENST00000441310 DCANP1Q8TF63 244 aa12.37□□□□□ -0.43
PMS1-213ENST00000441310 MOB4Q9Y3A3 225 aa12.37□□□□□ -0.43
PMS1-213ENST00000441310 MXRA5Q9NR99 2828 aa12.37□□□□□ -0.43
PMS1-213ENST00000441310 TRBV12-3P01733 135 aa12.37□□□□□ -0.43
PMS1-213ENST00000441310 DAZ2Q13117 558 aaKnown RBP12.36□□□□□ -0.43
PMS1-213ENST00000441310 DAZ4Q86SG3 579 aaKnown RBP12.36□□□□□ -0.43
PMS1-213ENST00000441310 SPANXDQ9BXN6 97 aa12.36□□□□□ -0.43
PMS1-213ENST00000441310 DAZ1Q9NQZ3 744 aaKnown RBP12.36□□□□□ -0.43
PMS1-213ENST00000441310 DAZ3Q9NR90 486 aaKnown RBP12.36□□□□□ -0.43
PMS1-213ENST00000441310 SPANXCQ9NY87 97 aa12.36□□□□□ -0.43
PMS1-213ENST00000441310 C20orf203Q8NBC4 194 aa12.36□□□□□ -0.43
PMS1-213ENST00000441310 C2orf48Q96LS8 159 aa12.36□□□□□ -0.43
PMS1-213ENST00000441310 CHD6Q8TD26 2715 aa12.35□□□□□ -0.43
PMS1-213ENST00000441310 OVOL1O14753 267 aa12.35□□□□□ -0.43
PMS1-213ENST00000441310 NSUN5P1Q3KNT7 163 aa12.35□□□□□ -0.43
PMS1-213ENST00000441310 A0A0U1RRA0 63 aa12.35□□□□□ -0.43
PMS1-213ENST00000441310 CD28P10747 220 aa12.35□□□□□ -0.43
PMS1-213ENST00000441310 TRAV13-1A0A0B4J241 112 aa12.34□□□□□ -0.43
PMS1-213ENST00000441310 NXPH4O95158 308 aa12.34□□□□□ -0.43
PMS1-213ENST00000441310 U3KQE9 123 aa12.34□□□□□ -0.43
PMS1-213ENST00000441310 TRACP01848 142 aa12.34□□□□□ -0.43
PMS1-213ENST00000441310 ATP5G1P05496 136 aa12.34□□□□□ -0.43
PMS1-213ENST00000441310 CRYGAP11844 174 aa12.33□□□□□ -0.43
PMS1-213ENST00000441310 KRTAP10-9P60411 292 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms