RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 MAP1LC3CQ9BXW4 147 aa13.49□□□□□ -0.25
SNX17-203ENST00000440760 K7EMI3 77 aa13.48□□□□□ -0.25
SNX17-203ENST00000440760 C2orf66Q6UXQ4 117 aa13.48□□□□□ -0.25
SNX17-203ENST00000440760 MRAPQ8TCY5 172 aa13.48□□□□□ -0.25
SNX17-203ENST00000440760 DAD1P61803 113 aa13.47□□□□□ -0.25
SNX17-203ENST00000440760 RPL39P62891 51 aaKnown RBP13.47□□□□□ -0.25
SNX17-203ENST00000440760 IFI27L1Q96BM0 104 aa13.47□□□□□ -0.25
SNX17-203ENST00000440760 DNAJC30Q96LL9 226 aa13.47□□□□□ -0.25
SNX17-203ENST00000440760 PMCHL2Q9BQD1 86 aa13.47□□□□□ -0.25
SNX17-203ENST00000440760 HUWE1Q7Z6Z7 4374 aaKnown RBP13.46□□□□□ -0.25
SNX17-203ENST00000440760 TRBV7-3A0A075B6L6 115 aa13.46□□□□□ -0.25
SNX17-203ENST00000440760 ATOH7Q8N100 152 aa13.46□□□□□ -0.25
SNX17-203ENST00000440760 TOMM6Q96B49 74 aa13.46□□□□□ -0.25
SNX17-203ENST00000440760 TRBV10-1A0A0K0K1A3 114 aa13.45□□□□□ -0.26
SNX17-203ENST00000440760 TRBV6-4A0A1B0GX49 114 aa13.45□□□□□ -0.26
SNX17-203ENST00000440760 RPL36AP83881 106 aaKnown RBP13.45□□□□□ -0.26
SNX17-203ENST00000440760 RPL36ALQ969Q0 106 aaKnown RBP13.45□□□□□ -0.26
SNX17-203ENST00000440760 CIDEAO60543 219 aa13.45□□□□□ -0.26
SNX17-203ENST00000440760 SPART-AS1P0CW21 52 aa13.45□□□□□ -0.26
SNX17-203ENST00000440760 RHOHQ15669 191 aa13.45□□□□□ -0.26
SNX17-203ENST00000440760 VAMP8Q9BV40 100 aa13.44□□□□□ -0.26
SNX17-203ENST00000440760 HHLA3Q9XRX5 114 aa13.43□□□□□ -0.26
SNX17-203ENST00000440760 CYSLTR1Q9Y271 337 aa13.43□□□□□ -0.26
SNX17-203ENST00000440760 ZNF25P17030 456 aaPredicted RBP13.43□□□□□ -0.26
SNX17-203ENST00000440760 UBE2D3P61077 147 aa13.43□□□□□ -0.26
SNX17-203ENST00000440760 UBE2D2P62837 147 aa13.43□□□□□ -0.26
SNX17-203ENST00000440760 SCGB3A1Q96QR1 104 aa13.43□□□□□ -0.26
SNX17-203ENST00000440760 PET117Q6UWS5 81 aa13.42□□□□□ -0.26
SNX17-203ENST00000440760 DLEU1O43261 78 aa13.41□□□□□ -0.26
SNX17-203ENST00000440760 HTN3P15516 51 aa13.41□□□□□ -0.26
SNX17-203ENST00000440760 PRADC1Q9BSG0 188 aa13.41□□□□□ -0.26
SNX17-203ENST00000440760 A0A0J9YWU9 116 aa13.41□□□□□ -0.26
SNX17-203ENST00000440760 G0S2P27469 103 aa13.41□□□□□ -0.26
SNX17-203ENST00000440760 CRYBA4P53673 196 aa13.41□□□□□ -0.26
SNX17-203ENST00000440760 COTL1Q14019 142 aa13.41□□□□□ -0.26
SNX17-203ENST00000440760 C20orf203Q8NBC4 194 aa13.41□□□□□ -0.26
SNX17-203ENST00000440760 ATP5LO75964 103 aa13.4□□□□□ -0.26
SNX17-203ENST00000440760 LINC01545Q5VT33 79 aa13.4□□□□□ -0.26
SNX17-203ENST00000440760 CHCHD7Q9BUK0 85 aa13.4□□□□□ -0.26
SNX17-203ENST00000440760 A0A0J9YY99 117 aa13.4□□□□□ -0.27
SNX17-203ENST00000440760 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.4□□□□□ -0.27
SNX17-203ENST00000440760 ATP5G1P05496 136 aa13.4□□□□□ -0.27
SNX17-203ENST00000440760 PRSS1P07477 247 aa13.4□□□□□ -0.27
SNX17-203ENST00000440760 MAJINQ3KP22 176 aa13.4□□□□□ -0.27
SNX17-203ENST00000440760 C11orf68Q9H3H3 251 aaKnown RBP13.4□□□□□ -0.27
SNX17-203ENST00000440760 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.39□□□□□ -0.27
SNX17-203ENST00000440760 C20orf202A1L168 122 aa13.39□□□□□ -0.27
SNX17-203ENST00000440760 IGKV2-29A2NJV5 120 aaPredicted RBP13.39□□□□□ -0.27
SNX17-203ENST00000440760 GYPEP15421 78 aa13.39□□□□□ -0.27
SNX17-203ENST00000440760 C12orf74Q32Q52 190 aa13.39□□□□□ -0.27
SNX17-203ENST00000440760 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
SNX17-203ENST00000440760 TM2D3Q9BRN9 247 aa13.39□□□□□ -0.27
SNX17-203ENST00000440760 PRO0255Q9UI72 69 aa13.39□□□□□ -0.27
SNX17-203ENST00000440760 PAM16Q9Y3D7 125 aa13.39□□□□□ -0.27
SNX17-203ENST00000440760 LINC00694P0DN24 101 aa13.38□□□□□ -0.27
SNX17-203ENST00000440760 ERASQ7Z444 233 aa13.38□□□□□ -0.27
SNX17-203ENST00000440760 DNAH9Q9NYC9 4486 aa13.38□□□□□ -0.27
SNX17-203ENST00000440760 F5H768 121 aa13.38□□□□□ -0.27
SNX17-203ENST00000440760 NTM-AS1Q6ZSK4 140 aa13.38□□□□□ -0.27
SNX17-203ENST00000440760 DAZ4Q86SG3 579 aaKnown RBP13.38□□□□□ -0.27
SNX17-203ENST00000440760 DAZ3Q9NR90 486 aaKnown RBP13.38□□□□□ -0.27
SNX17-203ENST00000440760 IGIPA6NJ69 53 aa13.37□□□□□ -0.27
SNX17-203ENST00000440760 ZC2HC1BQ5TFG8 222 aa13.37□□□□□ -0.27
SNX17-203ENST00000440760 Q6ZN92 141 aa13.37□□□□□ -0.27
SNX17-203ENST00000440760 BAALCQ8WXS3 180 aa13.37□□□□□ -0.27
SNX17-203ENST00000440760 VSIG2Q96IQ7 327 aa13.37□□□□□ -0.27
SNX17-203ENST00000440760 OPRPNQ99935 248 aaPredicted RBP13.37□□□□□ -0.27
SNX17-203ENST00000440760 PAX4O43316 350 aa13.36□□□□□ -0.27
SNX17-203ENST00000440760 ODF1Q14990 250 aa13.36□□□□□ -0.27
SNX17-203ENST00000440760 CEMP1Q6PRD7 247 aaPredicted RBP13.36□□□□□ -0.27
SNX17-203ENST00000440760 A0A096LPF7 62 aa13.36□□□□□ -0.27
SNX17-203ENST00000440760 TEX48A0A1B0GUV7 120 aa13.36□□□□□ -0.27
SNX17-203ENST00000440760 COL5A1-AS1Q5SY13 56 aa13.36□□□□□ -0.27
SNX17-203ENST00000440760 LGALS9CQ6DKI2 356 aa13.36□□□□□ -0.27
SNX17-203ENST00000440760 TRAV26-1A0A087WT03 109 aa13.35□□□□□ -0.27
SNX17-203ENST00000440760 ZMAT4Q9H898 229 aa13.35□□□□□ -0.27
SNX17-203ENST00000440760 Q6ZTC4 211 aa13.34□□□□□ -0.27
SNX17-203ENST00000440760 UQCR10Q9UDW1 63 aa13.34□□□□□ -0.27
SNX17-203ENST00000440760 TIMM17AQ99595 171 aa13.34□□□□□ -0.27
SNX17-203ENST00000440760 hDV102S1A0JD36 115 aa13.33□□□□□ -0.28
SNX17-203ENST00000440760 NANOS2P60321 138 aaKnown RBP13.33□□□□□ -0.28
SNX17-203ENST00000440760 SPATA45Q537H7 98 aa13.32□□□□□ -0.28
SNX17-203ENST00000440760 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
SNX17-203ENST00000440760 LINC01549A6NIU2 74 aa13.31□□□□□ -0.28
SNX17-203ENST00000440760 RNASE13Q5GAN3 156 aaKnown RBP13.31□□□□□ -0.28
SNX17-203ENST00000440760 TMEM141Q96I45 108 aa13.31□□□□□ -0.28
SNX17-203ENST00000440760 UBE2D4Q9Y2X8 147 aa13.31□□□□□ -0.28
SNX17-203ENST00000440760 IGLV4-3A0A075B6K6 122 aa13.31□□□□□ -0.28
SNX17-203ENST00000440760 A0A087WX48 190 aa13.31□□□□□ -0.28
SNX17-203ENST00000440760 IGLC3P0DOY3 106 aa13.31□□□□□ -0.28
SNX17-203ENST00000440760 ATP6V0E2Q8NHE4 81 aa13.31□□□□□ -0.28
SNX17-203ENST00000440760 FAM104AQ969W3 186 aa13.31□□□□□ -0.28
SNX17-203ENST00000440760 COL7A1Q02388 2944 aa13.3□□□□□ -0.28
SNX17-203ENST00000440760 PRSS29PA6NIE9 313 aa13.3□□□□□ -0.28
SNX17-203ENST00000440760 TCTAP57738 103 aa13.3□□□□□ -0.28
SNX17-203ENST00000440760 C11orf45Q8TAV5 145 aa13.3□□□□□ -0.28
SNX17-203ENST00000440760 TRAV9-2A0A087WT02 112 aa13.29□□□□□ -0.28
SNX17-203ENST00000440760 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
SNX17-203ENST00000440760 NPSP0C0P6 89 aa13.29□□□□□ -0.28
SNX17-203ENST00000440760 KRTAP21-3Q3LHN1 58 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms