RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SMKR1H3BMG3 65 aa12.07□□□□□ -0.48
CPSF4-205ENST00000440514 RPS10P46783 165 aaKnown RBP12.07□□□□□ -0.48
CPSF4-205ENST00000440514 FAM104BQ5XKR9 115 aa12.07□□□□□ -0.48
CPSF4-205ENST00000440514 ST20Q9HBF5 79 aa12.07□□□□□ -0.48
CPSF4-205ENST00000440514 TRAV8-3A0A0A6YYJ7 113 aa12.06□□□□□ -0.48
CPSF4-205ENST00000440514 PSCAO43653 123 aa12.06□□□□□ -0.48
CPSF4-205ENST00000440514 SPATA12Q7Z6I5 190 aa12.06□□□□□ -0.48
CPSF4-205ENST00000440514 Q8N976 141 aa12.06□□□□□ -0.48
CPSF4-205ENST00000440514 DYNC1H1Q14204 4646 aaKnown RBP12.05□□□□□ -0.48
CPSF4-205ENST00000440514 A0A1B0GXF2 115 aa12.05□□□□□ -0.48
CPSF4-205ENST00000440514 SDHAF1A6NFY7 115 aa12.05□□□□□ -0.48
CPSF4-205ENST00000440514 TCAPO15273 167 aa12.05□□□□□ -0.48
CPSF4-205ENST00000440514 ATRAIDQ6UW56 229 aa12.05□□□□□ -0.48
CPSF4-205ENST00000440514 SVBPQ8N300 66 aa12.05□□□□□ -0.48
CPSF4-205ENST00000440514 TMEM243Q9BU79 118 aa12.05□□□□□ -0.48
CPSF4-205ENST00000440514 COX11Q9Y6N1 276 aa12.05□□□□□ -0.48
CPSF4-205ENST00000440514 A0A087WTM6 91 aa12.04□□□□□ -0.48
CPSF4-205ENST00000440514 I3L3M4 83 aa12.04□□□□□ -0.48
CPSF4-205ENST00000440514 CKS2P33552 79 aa12.04□□□□□ -0.48
CPSF4-205ENST00000440514 AMTP48728 403 aa12.04□□□□□ -0.48
CPSF4-205ENST00000440514 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
CPSF4-205ENST00000440514 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
CPSF4-205ENST00000440514 RMI2Q96E14 147 aa12.04□□□□□ -0.48
CPSF4-205ENST00000440514 TM2D2Q9BX73 214 aa12.04□□□□□ -0.48
CPSF4-205ENST00000440514 H7C423 109 aa12.03□□□□□ -0.48
CPSF4-205ENST00000440514 VCYO14598 125 aa12.03□□□□□ -0.48
CPSF4-205ENST00000440514 PHOX2AO14813 284 aa12.03□□□□□ -0.48
CPSF4-205ENST00000440514 UBE2L6O14933 153 aa12.03□□□□□ -0.48
CPSF4-205ENST00000440514 SNAPINO95295 136 aa12.03□□□□□ -0.48
CPSF4-205ENST00000440514 ANGP03950 147 aaKnown RBP12.03□□□□□ -0.48
CPSF4-205ENST00000440514 PMCHP20382 165 aa12.03□□□□□ -0.48
CPSF4-205ENST00000440514 RBX1P62877 108 aa12.03□□□□□ -0.48
CPSF4-205ENST00000440514 COX19Q49B96 90 aa12.03□□□□□ -0.48
CPSF4-205ENST00000440514 MRPL51Q4U2R6 128 aaKnown RBP12.03□□□□□ -0.48
CPSF4-205ENST00000440514 C20orf78Q9BR46 151 aa12.03□□□□□ -0.48
CPSF4-205ENST00000440514 EREGO14944 169 aa12.02□□□□□ -0.49
CPSF4-205ENST00000440514 FUSP35637 526 aaKnown RBP eCLIP12.02□□□□□ -0.49
CPSF4-205ENST00000440514 SMAGPQ0VAQ4 97 aa12.02□□□□□ -0.49
CPSF4-205ENST00000440514 Q0VG73 95 aa12.02□□□□□ -0.49
CPSF4-205ENST00000440514 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.49
CPSF4-205ENST00000440514 TMEM70Q9BUB7 260 aa12.02□□□□□ -0.49
CPSF4-205ENST00000440514 C7orf77A4D0Y5 90 aa12.01□□□□□ -0.49
CPSF4-205ENST00000440514 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
CPSF4-205ENST00000440514 CLPSL2Q6UWE3 100 aa12.01□□□□□ -0.49
CPSF4-205ENST00000440514 NRACQ8N912 160 aa12.01□□□□□ -0.49
CPSF4-205ENST00000440514 KIR2DL4Q99706 377 aa12.01□□□□□ -0.49
CPSF4-205ENST00000440514 LAMTOR2Q9Y2Q5 125 aa12.01□□□□□ -0.49
CPSF4-205ENST00000440514 TRBV24-1A0A075B6N3 115 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 IGKV2D-24A0A075B6R9 120 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 TRBV27A0A0K0K1C4 114 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 LRCOL1A6NCL2 159 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 APOC3P02656 99 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 CRPP02741 224 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 APCSP02743 223 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 SUMO2P61956 95 aaKnown RBP12□□□□□ -0.49
CPSF4-205ENST00000440514 ENHOQ6UWT2 76 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 ORMDL3Q8N138 153 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 RPS10P5Q9NQ39 176 aa12□□□□□ -0.49
CPSF4-205ENST00000440514 A0A1B0GUV1 79 aa11.99□□□□□ -0.49
CPSF4-205ENST00000440514 TSHBP01222 138 aa11.99□□□□□ -0.49
CPSF4-205ENST00000440514 RPL32P62910 135 aaKnown RBP11.99□□□□□ -0.49
CPSF4-205ENST00000440514 IGLV4-60A0A075B6I1 120 aa11.98□□□□□ -0.49
CPSF4-205ENST00000440514 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-205ENST00000440514 IGKV2-29A2NJV5 120 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-205ENST00000440514 POLR2KP53803 58 aaKnown RBP11.98□□□□□ -0.49
CPSF4-205ENST00000440514 WFDC2Q14508 124 aa11.98□□□□□ -0.49
CPSF4-205ENST00000440514 MAPKAPK5-AS1Q8N8E1 139 aa11.98□□□□□ -0.49
CPSF4-205ENST00000440514 C20orf203Q8NBC4 194 aa11.98□□□□□ -0.49
CPSF4-205ENST00000440514 D6R8Y8 96 aa11.97□□□□□ -0.49
CPSF4-205ENST00000440514 LECT2O14960 151 aa11.97□□□□□ -0.49
CPSF4-205ENST00000440514 FCER1GP30273 86 aa11.97□□□□□ -0.49
CPSF4-205ENST00000440514 LINC00269Q8N2A0 174 aa11.97□□□□□ -0.49
CPSF4-205ENST00000440514 TMEM18Q96B42 140 aa11.97□□□□□ -0.49
CPSF4-205ENST00000440514 TMEM136Q6ZRR5 245 aa11.96□□□□□ -0.49
CPSF4-205ENST00000440514 PRR34Q9NV39 138 aa11.96□□□□□ -0.49
CPSF4-205ENST00000440514 TNFRSF6BO95407 300 aa11.95□□□□□ -0.5
CPSF4-205ENST00000440514 HLA-DQA1P01909 254 aa11.95□□□□□ -0.5
CPSF4-205ENST00000440514 MT-ND6P03923 174 aa11.95□□□□□ -0.5
CPSF4-205ENST00000440514 ZNF25P17030 456 aaPredicted RBP11.95□□□□□ -0.5
CPSF4-205ENST00000440514 MIAQ16674 131 aa11.95□□□□□ -0.5
CPSF4-205ENST00000440514 AMMECR1LQ6DCA0 310 aa11.95□□□□□ -0.5
CPSF4-205ENST00000440514 C1orf43Q9BWL3 253 aa11.95□□□□□ -0.5
CPSF4-205ENST00000440514 DNAH5Q8TE73 4624 aa11.95□□□□□ -0.5
CPSF4-205ENST00000440514 NPYP01303 97 aa11.94□□□□□ -0.5
CPSF4-205ENST00000440514 REG3AQ06141 175 aa11.94□□□□□ -0.5
CPSF4-205ENST00000440514 BAALCQ8WXS3 180 aa11.94□□□□□ -0.5
CPSF4-205ENST00000440514 TMEM101Q96IK0 257 aa11.94□□□□□ -0.5
CPSF4-205ENST00000440514 PRELID3AQ96N28 172 aa11.94□□□□□ -0.5
CPSF4-205ENST00000440514 GNB1LQ9BYB4 327 aa11.94□□□□□ -0.5
CPSF4-205ENST00000440514 FGF6P10767 208 aa11.93□□□□□ -0.5
CPSF4-205ENST00000440514 ESDP10768 282 aa11.93□□□□□ -0.5
CPSF4-205ENST00000440514 Q8N814 137 aa11.93□□□□□ -0.5
CPSF4-205ENST00000440514 KIAA1109Q2LD37 5005 aa11.93□□□□□ -0.5
CPSF4-205ENST00000440514 TRAV8-4A0A0B4J246 113 aa11.92□□□□□ -0.5
CPSF4-205ENST00000440514 K7EMI3 77 aa11.92□□□□□ -0.5
CPSF4-205ENST00000440514 RAB5AP20339 215 aa11.92□□□□□ -0.5
CPSF4-205ENST00000440514 RNASEKQ6P5S7 137 aaKnown RBP11.92□□□□□ -0.5
CPSF4-205ENST00000440514 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
CPSF4-205ENST00000440514 G0S2P27469 103 aa11.91□□□□□ -0.5
CPSF4-205ENST00000440514 CDPF1Q6NVV7 123 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms