RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 D6R8Y8 96 aa12.34□□□□□ -0.43
PTX4-202ENST00000440447 POLR2KP53803 58 aaKnown RBP12.34□□□□□ -0.43
PTX4-202ENST00000440447 NFE4Q86UQ8 179 aa12.34□□□□□ -0.43
PTX4-202ENST00000440447 SUMO2P61956 95 aaKnown RBP12.33□□□□□ -0.44
PTX4-202ENST00000440447 GAGE6Q13070 117 aa12.33□□□□□ -0.44
PTX4-202ENST00000440447 ELOBQ15370 118 aa12.33□□□□□ -0.44
PTX4-202ENST00000440447 TMEM136Q6ZRR5 245 aa12.33□□□□□ -0.44
PTX4-202ENST00000440447 ORMDL3Q8N138 153 aa12.33□□□□□ -0.44
PTX4-202ENST00000440447 TRBV24-1A0A075B6N3 115 aa12.32□□□□□ -0.44
PTX4-202ENST00000440447 TRBV27A0A0K0K1C4 114 aa12.32□□□□□ -0.44
PTX4-202ENST00000440447 VCYO14598 125 aa12.32□□□□□ -0.44
PTX4-202ENST00000440447 UBE2L6O14933 153 aa12.32□□□□□ -0.44
PTX4-202ENST00000440447 TNFRSF6BO95407 300 aa12.32□□□□□ -0.44
PTX4-202ENST00000440447 APCSP02743 223 aa12.32□□□□□ -0.44
PTX4-202ENST00000440447 LAGE3Q14657 143 aa12.32□□□□□ -0.44
PTX4-202ENST00000440447 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
PTX4-202ENST00000440447 PRSS29PA6NIE9 313 aa12.31□□□□□ -0.44
PTX4-202ENST00000440447 MPV17L2Q567V2 206 aa12.31□□□□□ -0.44
PTX4-202ENST00000440447 ATRAIDQ6UW56 229 aa12.31□□□□□ -0.44
PTX4-202ENST00000440447 KLK12Q9UKR0 248 aa12.31□□□□□ -0.44
PTX4-202ENST00000440447 FRAS1Q86XX4 4008 aa12.3□□□□□ -0.44
PTX4-202ENST00000440447 DNAH17Q9UFH2 4485 aa12.3□□□□□ -0.44
PTX4-202ENST00000440447 PHOX2AO14813 284 aa12.3□□□□□ -0.44
PTX4-202ENST00000440447 PRELID3AQ96N28 172 aa12.3□□□□□ -0.44
PTX4-202ENST00000440447 Q9HAA7 133 aa12.3□□□□□ -0.44
PTX4-202ENST00000440447 TSHBP01222 138 aa12.29□□□□□ -0.44
PTX4-202ENST00000440447 NPYP01303 97 aa12.29□□□□□ -0.44
PTX4-202ENST00000440447 RBX1P62877 108 aa12.29□□□□□ -0.44
PTX4-202ENST00000440447 COX19Q49B96 90 aa12.29□□□□□ -0.44
PTX4-202ENST00000440447 KIR2DL4Q99706 377 aa12.29□□□□□ -0.44
PTX4-202ENST00000440447 TRAV8-3A0A0A6YYJ7 113 aa12.28□□□□□ -0.44
PTX4-202ENST00000440447 HLA-DQA1P01909 254 aa12.28□□□□□ -0.44
PTX4-202ENST00000440447 ANGP03950 147 aaKnown RBP12.28□□□□□ -0.44
PTX4-202ENST00000440447 FCER1GP30273 86 aa12.28□□□□□ -0.44
PTX4-202ENST00000440447 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
PTX4-202ENST00000440447 Q6ZRN7 208 aaPredicted RBP12.28□□□□□ -0.44
PTX4-202ENST00000440447 Q8N976 141 aa12.28□□□□□ -0.44
PTX4-202ENST00000440447 GNB1LQ9BYB4 327 aa12.28□□□□□ -0.44
PTX4-202ENST00000440447 LAMTOR2Q9Y2Q5 125 aa12.28□□□□□ -0.44
PTX4-202ENST00000440447 UBE2WQ96B02 151 aa12.27□□□□□ -0.45
PTX4-202ENST00000440447 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
PTX4-202ENST00000440447 A0A1B0GUV1 79 aa12.26□□□□□ -0.45
PTX4-202ENST00000440447 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
PTX4-202ENST00000440447 H7C423 109 aa12.26□□□□□ -0.45
PTX4-202ENST00000440447 TNP2Q05952 138 aa12.26□□□□□ -0.45
PTX4-202ENST00000440447 SMIM2Q9BVW6 85 aa12.26□□□□□ -0.45
PTX4-202ENST00000440447 FAT2Q9NYQ8 4349 aa12.25□□□□□ -0.45
PTX4-202ENST00000440447 TGIF2-C20orf24A0A0A6YYL0 155 aa12.25□□□□□ -0.45
PTX4-202ENST00000440447 TCAPO15273 167 aa12.25□□□□□ -0.45
PTX4-202ENST00000440447 CRPP02741 224 aa12.25□□□□□ -0.45
PTX4-202ENST00000440447 ESDP10768 282 aa12.25□□□□□ -0.45
PTX4-202ENST00000440447 Q0VG73 95 aa12.25□□□□□ -0.45
PTX4-202ENST00000440447 AMMECR1LQ6DCA0 310 aa12.25□□□□□ -0.45
PTX4-202ENST00000440447 RMI2Q96E14 147 aa12.25□□□□□ -0.45
PTX4-202ENST00000440447 TM2D2Q9BX73 214 aa12.25□□□□□ -0.45
PTX4-202ENST00000440447 PSCAO43653 123 aa12.24□□□□□ -0.45
PTX4-202ENST00000440447 MT-ND6P03923 174 aa12.24□□□□□ -0.45
PTX4-202ENST00000440447 MAP1LC3AQ9H492 121 aa12.24□□□□□ -0.45
PTX4-202ENST00000440447 KIAA1644Q3SXP7 199 aa12.23□□□□□ -0.45
PTX4-202ENST00000440447 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
PTX4-202ENST00000440447 LINC00269Q8N2A0 174 aa12.23□□□□□ -0.45
PTX4-202ENST00000440447 IGLV4-60A0A075B6I1 120 aa12.22□□□□□ -0.45
PTX4-202ENST00000440447 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
PTX4-202ENST00000440447 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
PTX4-202ENST00000440447 FGF6P10767 208 aa12.22□□□□□ -0.45
PTX4-202ENST00000440447 ENHOQ6UWT2 76 aa12.22□□□□□ -0.45
PTX4-202ENST00000440447 C20orf203Q8NBC4 194 aa12.22□□□□□ -0.45
PTX4-202ENST00000440447 MRPL18Q9H0U6 180 aaKnown RBP12.22□□□□□ -0.45
PTX4-202ENST00000440447 COX11Q9Y6N1 276 aa12.22□□□□□ -0.45
PTX4-202ENST00000440447 IGKV2D-24A0A075B6R9 120 aa12.21□□□□□ -0.45
PTX4-202ENST00000440447 ZNF25P17030 456 aaPredicted RBP12.21□□□□□ -0.45
PTX4-202ENST00000440447 RAB5AP20339 215 aa12.21□□□□□ -0.45
PTX4-202ENST00000440447 FABP9Q0Z7S8 132 aa12.21□□□□□ -0.45
PTX4-202ENST00000440447 TMEM101Q96IK0 257 aa12.21□□□□□ -0.45
PTX4-202ENST00000440447 SMCO4Q9NRQ5 59 aa12.21□□□□□ -0.45
PTX4-202ENST00000440447 PRR34Q9NV39 138 aa12.21□□□□□ -0.45
PTX4-202ENST00000440447 SMAGPQ0VAQ4 97 aa12.2□□□□□ -0.46
PTX4-202ENST00000440447 MIAQ16674 131 aa12.2□□□□□ -0.46
PTX4-202ENST00000440447 CLPSL2Q6UWE3 100 aa12.2□□□□□ -0.46
PTX4-202ENST00000440447 TMEM18Q96B42 140 aa12.2□□□□□ -0.46
PTX4-202ENST00000440447 A0A1B0GVY2 172 aa12.19□□□□□ -0.46
PTX4-202ENST00000440447 EREGO14944 169 aa12.19□□□□□ -0.46
PTX4-202ENST00000440447 REG3AQ06141 175 aa12.19□□□□□ -0.46
PTX4-202ENST00000440447 C1orf43Q9BWL3 253 aa12.19□□□□□ -0.46
PTX4-202ENST00000440447 TRAPPC1Q9Y5R8 145 aa12.19□□□□□ -0.46
PTX4-202ENST00000440447 MRPL52Q86TS9 123 aaKnown RBP12.18□□□□□ -0.46
PTX4-202ENST00000440447 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
PTX4-202ENST00000440447 Q8N8P6 123 aa12.18□□□□□ -0.46
PTX4-202ENST00000440447 OR5A1Q8NGJ0 315 aa12.18□□□□□ -0.46
PTX4-202ENST00000440447 YPEL4Q96NS1 127 aa12.18□□□□□ -0.46
PTX4-202ENST00000440447 DGAT2L7PQ6IED9 249 aa12.17□□□□□ -0.46
PTX4-202ENST00000440447 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
PTX4-202ENST00000440447 NXT2Q9NPJ8 142 aaKnown RBP12.17□□□□□ -0.46
PTX4-202ENST00000440447 EPPK1P58107 5090 aaKnown RBP12.17□□□□□ -0.46
PTX4-202ENST00000440447 A0A087WTM6 91 aa12.16□□□□□ -0.46
PTX4-202ENST00000440447 TRAV8-4A0A0B4J246 113 aa12.15□□□□□ -0.46
PTX4-202ENST00000440447 UBE2D4Q9Y2X8 147 aa12.15□□□□□ -0.46
PTX4-202ENST00000440447 HECTD4Q9Y4D8 3996 aa12.15□□□□□ -0.46
PTX4-202ENST00000440447 IGKV3OR2-268A0A0C4DH90 116 aa12.14□□□□□ -0.47
PTX4-202ENST00000440447 K7EMI3 77 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 238.1 ms