RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 GAGE13Q4V321 117 aa9.57□□□□□ -0.88
HLA-DPA1-243ENST00000437811 PHLDA1Q8WV24 401 aaPredicted RBP9.57□□□□□ -0.88
HLA-DPA1-243ENST00000437811 SPATA25Q9BR10 227 aa9.57□□□□□ -0.88
HLA-DPA1-243ENST00000437811 PRADC1Q9BSG0 188 aa9.57□□□□□ -0.88
HLA-DPA1-243ENST00000437811 CYSLTR1Q9Y271 337 aa9.57□□□□□ -0.88
HLA-DPA1-243ENST00000437811 PKD1L1Q8TDX9 2849 aa9.56□□□□□ -0.88
HLA-DPA1-243ENST00000437811 LOC100131303A0A0U1RQF7 123 aa9.56□□□□□ -0.88
HLA-DPA1-243ENST00000437811 C20orf202A1L168 122 aa9.56□□□□□ -0.88
HLA-DPA1-243ENST00000437811 LINC00694P0DN24 101 aa9.56□□□□□ -0.88
HLA-DPA1-243ENST00000437811 DEFB121Q5J5C9 76 aa9.56□□□□□ -0.88
HLA-DPA1-243ENST00000437811 TM2D3Q9BRN9 247 aa9.56□□□□□ -0.88
HLA-DPA1-243ENST00000437811 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
HLA-DPA1-243ENST00000437811 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
HLA-DPA1-243ENST00000437811 ATP5G1P05496 136 aa9.55□□□□□ -0.88
HLA-DPA1-243ENST00000437811 CRYBA4P53673 196 aa9.55□□□□□ -0.88
HLA-DPA1-243ENST00000437811 COTL1Q14019 142 aa9.55□□□□□ -0.88
HLA-DPA1-243ENST00000437811 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
HLA-DPA1-243ENST00000437811 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
HLA-DPA1-243ENST00000437811 SCGB3A1Q96QR1 104 aa9.55□□□□□ -0.88
HLA-DPA1-243ENST00000437811 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
HLA-DPA1-243ENST00000437811 PRO0255Q9UI72 69 aa9.55□□□□□ -0.88
HLA-DPA1-243ENST00000437811 H0Y8G0 127 aa9.54□□□□□ -0.88
HLA-DPA1-243ENST00000437811 RPL39P62891 51 aaKnown RBP9.54□□□□□ -0.88
HLA-DPA1-243ENST00000437811 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
HLA-DPA1-243ENST00000437811 TEX43Q6ZNM6 134 aa9.54□□□□□ -0.88
HLA-DPA1-243ENST00000437811 ERASQ7Z444 233 aa9.54□□□□□ -0.88
HLA-DPA1-243ENST00000437811 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.53□□□□□ -0.88
HLA-DPA1-243ENST00000437811 C12orf74Q32Q52 190 aa9.53□□□□□ -0.88
HLA-DPA1-243ENST00000437811 LCE2AQ5TA79 106 aaPredicted RBP9.53□□□□□ -0.88
HLA-DPA1-243ENST00000437811 LGALS9CQ6DKI2 356 aa9.53□□□□□ -0.88
HLA-DPA1-243ENST00000437811 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
HLA-DPA1-243ENST00000437811 IGIPA6NJ69 53 aa9.52□□□□□ -0.88
HLA-DPA1-243ENST00000437811 LCE2CQ5TA81 110 aa9.52□□□□□ -0.88
HLA-DPA1-243ENST00000437811 MRAPQ8TCY5 172 aa9.52□□□□□ -0.88
HLA-DPA1-243ENST00000437811 TIMM17AQ99595 171 aa9.52□□□□□ -0.88
HLA-DPA1-243ENST00000437811 ZMAT4Q9H898 229 aa9.52□□□□□ -0.88
HLA-DPA1-243ENST00000437811 A0A0J9YWU9 116 aa9.51□□□□□ -0.89
HLA-DPA1-243ENST00000437811 PAX4O43316 350 aa9.51□□□□□ -0.89
HLA-DPA1-243ENST00000437811 PRSS1P07477 247 aa9.51□□□□□ -0.89
HLA-DPA1-243ENST00000437811 GYPEP15421 78 aa9.51□□□□□ -0.89
HLA-DPA1-243ENST00000437811 S100A12P80511 92 aa9.51□□□□□ -0.89
HLA-DPA1-243ENST00000437811 Q6ZN92 141 aa9.51□□□□□ -0.89
HLA-DPA1-243ENST00000437811 TMEM141Q96I45 108 aa9.51□□□□□ -0.89
HLA-DPA1-243ENST00000437811 F5H768 121 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 ODF1Q14990 250 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 NTM-AS1Q6ZSK4 140 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 BAALCQ8WXS3 180 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 VSIG2Q96IQ7 327 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 PMCHL2Q9BQD1 86 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 GTSF1LQ9H1H1 148 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 TRAV12-1A0A0B4J245 112 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 HTN3P15516 51 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 ATOH7Q8N100 152 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 VAMP8Q9BV40 100 aa9.5□□□□□ -0.89
HLA-DPA1-243ENST00000437811 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.49□□□□□ -0.89
HLA-DPA1-243ENST00000437811 A0A087WX48 190 aa9.49□□□□□ -0.89
HLA-DPA1-243ENST00000437811 IGKV2-29A2NJV5 120 aaPredicted RBP9.49□□□□□ -0.89
HLA-DPA1-243ENST00000437811 TMEM97Q5BJF2 176 aa9.49□□□□□ -0.89
HLA-DPA1-243ENST00000437811 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
HLA-DPA1-243ENST00000437811 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
HLA-DPA1-243ENST00000437811 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
HLA-DPA1-243ENST00000437811 A0A0J9YY99 117 aa9.48□□□□□ -0.89
HLA-DPA1-243ENST00000437811 ATP6V0E2Q8NHE4 81 aa9.48□□□□□ -0.89
HLA-DPA1-243ENST00000437811 UBE2D4Q9Y2X8 147 aa9.48□□□□□ -0.89
HLA-DPA1-243ENST00000437811 IGLV4-3A0A075B6K6 122 aa9.47□□□□□ -0.89
HLA-DPA1-243ENST00000437811 TRAV9-2A0A087WT02 112 aa9.47□□□□□ -0.89
HLA-DPA1-243ENST00000437811 NPSP0C0P6 89 aa9.47□□□□□ -0.89
HLA-DPA1-243ENST00000437811 Q6ZTC4 211 aa9.47□□□□□ -0.89
HLA-DPA1-243ENST00000437811 C11orf45Q8TAV5 145 aa9.47□□□□□ -0.89
HLA-DPA1-243ENST00000437811 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
HLA-DPA1-243ENST00000437811 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
HLA-DPA1-243ENST00000437811 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
HLA-DPA1-243ENST00000437811 NOTCH1P46531 2555 aa9.46□□□□□ -0.89
HLA-DPA1-243ENST00000437811 NBEAL2Q6ZNJ1 2754 aa9.46□□□□□ -0.89
HLA-DPA1-243ENST00000437811 TRBV25-1A0A075B6N4 114 aa9.46□□□□□ -0.9
HLA-DPA1-243ENST00000437811 PRSS29PA6NIE9 313 aa9.46□□□□□ -0.9
HLA-DPA1-243ENST00000437811 NANOS2P60321 138 aaKnown RBP9.46□□□□□ -0.9
HLA-DPA1-243ENST00000437811 PMVKQ15126 192 aa9.46□□□□□ -0.9
HLA-DPA1-243ENST00000437811 ZNF664Q8N3J9 261 aa9.46□□□□□ -0.9
HLA-DPA1-243ENST00000437811 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.9
HLA-DPA1-243ENST00000437811 PAM16Q9Y3D7 125 aa9.46□□□□□ -0.9
HLA-DPA1-243ENST00000437811 CHTOPQ9Y3Y2 248 aaKnown RBP9.46□□□□□ -0.9
HLA-DPA1-243ENST00000437811 MGAM2Q2M2H8 2515 aa9.45□□□□□ -0.9
HLA-DPA1-243ENST00000437811 TRBV6-8A0A0A6YYG3 113 aa9.45□□□□□ -0.9
HLA-DPA1-243ENST00000437811 F8VRH5 84 aa9.45□□□□□ -0.9
HLA-DPA1-243ENST00000437811 DPM2O94777 84 aa9.45□□□□□ -0.9
HLA-DPA1-243ENST00000437811 MAJINQ3KP22 176 aa9.45□□□□□ -0.9
HLA-DPA1-243ENST00000437811 PAPPA-AS1Q5QFB9 102 aa9.45□□□□□ -0.9
HLA-DPA1-243ENST00000437811 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
HLA-DPA1-243ENST00000437811 OPRPNQ99935 248 aaPredicted RBP9.45□□□□□ -0.9
HLA-DPA1-243ENST00000437811 H7C423 109 aa9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 IGKCP01834 107 aa9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 PKIAP61925 76 aa9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 SMAGPQ0VAQ4 97 aa9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 MRPL23Q16540 153 aaKnown RBP9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 SPATA45Q537H7 98 aa9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 ZC2HC1BQ5TFG8 222 aa9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 MRPL52Q86TS9 123 aaKnown RBP9.44□□□□□ -0.9
HLA-DPA1-243ENST00000437811 PRO1933Q9H354 126 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms