RNA–Protein interactions for RNA: ENST00000437169.5

NCSTN-207, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 448 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-207ENST00000437169 KANTRA0A1W2PQU2 76 aa11.8□□□□□ -0.52
NCSTN-207ENST00000437169 LYZL1Q6UWQ5 148 aa11.8□□□□□ -0.52
NCSTN-207ENST00000437169 SMIM12Q96EX1 92 aa11.8□□□□□ -0.52
NCSTN-207ENST00000437169 DPH3P1Q9H4G8 78 aa11.8□□□□□ -0.52
NCSTN-207ENST00000437169 F2Z2F3 143 aa11.79□□□□□ -0.52
NCSTN-207ENST00000437169 AP5S1Q9NUS5 200 aa11.79□□□□□ -0.52
NCSTN-207ENST00000437169 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.78□□□□□ -0.52
NCSTN-207ENST00000437169 NTF3P20783 257 aa11.78□□□□□ -0.52
NCSTN-207ENST00000437169 CTRLP40313 264 aa11.78□□□□□ -0.52
NCSTN-207ENST00000437169 C9orf62Q8N4C0 152 aa11.78□□□□□ -0.52
NCSTN-207ENST00000437169 CNFNQ9BYD5 112 aa11.78□□□□□ -0.52
NCSTN-207ENST00000437169 RNF213Q63HN8 5207 aa11.77□□□□□ -0.52
NCSTN-207ENST00000437169 PHOX2AO14813 284 aa11.77□□□□□ -0.53
NCSTN-207ENST00000437169 TRGC1P0CF51 173 aa11.77□□□□□ -0.53
NCSTN-207ENST00000437169 WDR73Q6P4I2 378 aa11.77□□□□□ -0.53
NCSTN-207ENST00000437169 GAGE12HA6NDE8 117 aa11.76□□□□□ -0.53
NCSTN-207ENST00000437169 AMTP48728 403 aa11.76□□□□□ -0.53
NCSTN-207ENST00000437169 GNG4P50150 75 aa11.76□□□□□ -0.53
NCSTN-207ENST00000437169 EIF5AP63241 154 aaKnown RBP11.76□□□□□ -0.53
NCSTN-207ENST00000437169 COTL1Q14019 142 aa11.76□□□□□ -0.53
NCSTN-207ENST00000437169 GATD1Q8NB37 220 aa11.76□□□□□ -0.53
NCSTN-207ENST00000437169 IFNA1P01562 189 aa11.75□□□□□ -0.53
NCSTN-207ENST00000437169 MEF2BQ02080 365 aaPredicted RBP11.75□□□□□ -0.53
NCSTN-207ENST00000437169 COX6A2Q02221 97 aa11.75□□□□□ -0.53
NCSTN-207ENST00000437169 XKRY2A2RUG3 117 aa11.74□□□□□ -0.53
NCSTN-207ENST00000437169 UBE2L6O14933 153 aa11.74□□□□□ -0.53
NCSTN-207ENST00000437169 NUDT10Q8NFP7 164 aa11.74□□□□□ -0.53
NCSTN-207ENST00000437169 PRSS3P2Q8NHM4 247 aa11.74□□□□□ -0.53
NCSTN-207ENST00000437169 NUDT11Q96G61 164 aa11.74□□□□□ -0.53
NCSTN-207ENST00000437169 RPS10P46783 165 aaKnown RBP11.73□□□□□ -0.53
NCSTN-207ENST00000437169 SULT1A2P50226 295 aa11.73□□□□□ -0.53
NCSTN-207ENST00000437169 Q6ZNX1 250 aa11.73□□□□□ -0.53
NCSTN-207ENST00000437169 DPH3Q96FX2 82 aa11.73□□□□□ -0.53
NCSTN-207ENST00000437169 TRAV26-2A0A0B4J265 109 aa11.72□□□□□ -0.53
NCSTN-207ENST00000437169 PDE6DO43924 150 aa11.72□□□□□ -0.53
NCSTN-207ENST00000437169 HIGD2BQ4VC39 106 aa11.72□□□□□ -0.53
NCSTN-207ENST00000437169 CFAP161Q6P656 301 aa11.72□□□□□ -0.53
NCSTN-207ENST00000437169 GVQW2A0A096LPI5 108 aaPredicted RBP11.71□□□□□ -0.53
NCSTN-207ENST00000437169 NDUFS6O75380 124 aaKnown RBP11.71□□□□□ -0.53
NCSTN-207ENST00000437169 PRR3P79522 188 aaKnown RBP11.71□□□□□ -0.53
NCSTN-207ENST00000437169 CHCHD10Q8WYQ3 142 aaPredicted RBP11.71□□□□□ -0.53
NCSTN-207ENST00000437169 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
NCSTN-207ENST00000437169 LINC01600Q96MT4 127 aa11.71□□□□□ -0.53
NCSTN-207ENST00000437169 MED9Q9NWA0 146 aa11.71□□□□□ -0.53
NCSTN-207ENST00000437169 K7EN84 100 aa11.7□□□□□ -0.54
NCSTN-207ENST00000437169 FOXI1Q12951 378 aa11.7□□□□□ -0.54
NCSTN-207ENST00000437169 BIN3Q9NQY0 253 aa11.7□□□□□ -0.54
NCSTN-207ENST00000437169 IGKV3OR2-268A0A0C4DH90 116 aa11.69□□□□□ -0.54
NCSTN-207ENST00000437169 NCR2O95944 276 aa11.69□□□□□ -0.54
NCSTN-207ENST00000437169 BCL2P10415 239 aa11.69□□□□□ -0.54
NCSTN-207ENST00000437169 FOXA3P55318 350 aaPredicted RBP11.69□□□□□ -0.54
NCSTN-207ENST00000437169 ODF1Q14990 250 aa11.69□□□□□ -0.54
NCSTN-207ENST00000437169 TWIST1Q15672 202 aa11.69□□□□□ -0.54
NCSTN-207ENST00000437169 MAJINQ3KP22 176 aa11.69□□□□□ -0.54
NCSTN-207ENST00000437169 C7orf33Q8WU49 177 aa11.69□□□□□ -0.54
NCSTN-207ENST00000437169 GTSF1Q8WW33 167 aa11.69□□□□□ -0.54
NCSTN-207ENST00000437169 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.68□□□□□ -0.54
NCSTN-207ENST00000437169 A0A096LNI7 61 aa11.68□□□□□ -0.54
NCSTN-207ENST00000437169 IGKV2-29A2NJV5 120 aaPredicted RBP11.68□□□□□ -0.54
NCSTN-207ENST00000437169 H7C423 109 aa11.68□□□□□ -0.54
NCSTN-207ENST00000437169 RNASE7Q9H1E1 156 aaKnown RBP11.68□□□□□ -0.54
NCSTN-207ENST00000437169 RPP21Q9H633 154 aaKnown RBP11.68□□□□□ -0.54
NCSTN-207ENST00000437169 IGKV2-24A0A0C4DH68 120 aa11.67□□□□□ -0.54
NCSTN-207ENST00000437169 FAM231BA6NCW3 169 aa11.67□□□□□ -0.54
NCSTN-207ENST00000437169 FGF6P10767 208 aa11.67□□□□□ -0.54
NCSTN-207ENST00000437169 STPG4Q8N801 248 aa11.67□□□□□ -0.54
NCSTN-207ENST00000437169 TEX46H3BTG2 121 aa11.66□□□□□ -0.54
NCSTN-207ENST00000437169 OCC1Q8TAD7 63 aa11.66□□□□□ -0.54
NCSTN-207ENST00000437169 KRTAP10-8P60410 259 aa11.65□□□□□ -0.54
NCSTN-207ENST00000437169 SDHAF1A6NFY7 115 aa11.64□□□□□ -0.55
NCSTN-207ENST00000437169 APCSP02743 223 aa11.64□□□□□ -0.55
NCSTN-207ENST00000437169 ESDP10768 282 aa11.64□□□□□ -0.55
NCSTN-207ENST00000437169 AMMECR1LQ6DCA0 310 aa11.64□□□□□ -0.55
NCSTN-207ENST00000437169 EIF5AL1Q6IS14 154 aaKnown RBP11.64□□□□□ -0.55
NCSTN-207ENST00000437169 RNASEKQ6P5S7 137 aaKnown RBP11.64□□□□□ -0.55
NCSTN-207ENST00000437169 OR5A1Q8NGJ0 315 aa11.64□□□□□ -0.55
NCSTN-207ENST00000437169 A0A0J9YXV3 536 aa11.63□□□□□ -0.55
NCSTN-207ENST00000437169 TRBV6-5A0A0K0K1A5 114 aa11.63□□□□□ -0.55
NCSTN-207ENST00000437169 GAS8-AS1O95177 125 aa11.63□□□□□ -0.55
NCSTN-207ENST00000437169 LYPD6BQ8NI32 183 aa11.63□□□□□ -0.55
NCSTN-207ENST00000437169 LINC00959A0A1B0GUT2 108 aa11.62□□□□□ -0.55
NCSTN-207ENST00000437169 ZNF25P17030 456 aaPredicted RBP11.62□□□□□ -0.55
NCSTN-207ENST00000437169 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.55
NCSTN-207ENST00000437169 LINC00526Q96FQ7 95 aa11.62□□□□□ -0.55
NCSTN-207ENST00000437169 TEX261Q6UWH6 196 aa11.61□□□□□ -0.55
NCSTN-207ENST00000437169 I3L3M4 83 aa11.6□□□□□ -0.55
NCSTN-207ENST00000437169 CCL25O15444 150 aa11.6□□□□□ -0.55
NCSTN-207ENST00000437169 TSHBP01222 138 aa11.6□□□□□ -0.55
NCSTN-207ENST00000437169 XCL1P47992 114 aa11.6□□□□□ -0.55
NCSTN-207ENST00000437169 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
NCSTN-207ENST00000437169 TAGLN2P37802 199 aaKnown RBP11.59□□□□□ -0.55
NCSTN-207ENST00000437169 SPINK6Q6UWN8 80 aa11.59□□□□□ -0.55
NCSTN-207ENST00000437169 FAM231DQ6ZW35 169 aa11.59□□□□□ -0.55
NCSTN-207ENST00000437169 SLC51BQ86UW2 128 aa11.58□□□□□ -0.56
NCSTN-207ENST00000437169 CDC42SE2Q9NRR3 84 aa11.58□□□□□ -0.56
NCSTN-207ENST00000437169 LINC00474Q9P2X8 69 aa11.58□□□□□ -0.56
NCSTN-207ENST00000437169 PMCHP20382 165 aa11.57□□□□□ -0.56
NCSTN-207ENST00000437169 POLR2KP53803 58 aaKnown RBP11.57□□□□□ -0.56
NCSTN-207ENST00000437169 SMIM15Q7Z3B0 74 aa11.57□□□□□ -0.56
NCSTN-207ENST00000437169 MRPL52Q86TS9 123 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms