RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 SMIM12Q96EX1 92 aa6.92□□□□□ -1.3
SPTLC1P4-201ENST00000435997 TNXBP22105 4242 aa6.92□□□□□ -1.3
SPTLC1P4-201ENST00000435997 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
SPTLC1P4-201ENST00000435997 HMSDA8MTL9 139 aa6.91□□□□□ -1.3
SPTLC1P4-201ENST00000435997 BCL2L11O43521 198 aa6.91□□□□□ -1.3
SPTLC1P4-201ENST00000435997 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
SPTLC1P4-201ENST00000435997 CACNG7P62955 275 aa6.91□□□□□ -1.3
SPTLC1P4-201ENST00000435997 RASL11AQ6T310 242 aa6.91□□□□□ -1.3
SPTLC1P4-201ENST00000435997 CNFNQ9BYD5 112 aa6.91□□□□□ -1.3
SPTLC1P4-201ENST00000435997 MANBALQ9NQG1 85 aa6.91□□□□□ -1.3
SPTLC1P4-201ENST00000435997 TRAV1-1A0A0B4J248 108 aa6.9□□□□□ -1.3
SPTLC1P4-201ENST00000435997 CTRLP40313 264 aa6.9□□□□□ -1.3
SPTLC1P4-201ENST00000435997 RPS20P60866 119 aaKnown RBP6.9□□□□□ -1.3
SPTLC1P4-201ENST00000435997 OR2D3Q8NGH3 330 aa6.9□□□□□ -1.3
SPTLC1P4-201ENST00000435997 NIT2Q9NQR4 276 aa6.9□□□□□ -1.3
SPTLC1P4-201ENST00000435997 AP5S1Q9NUS5 200 aa6.9□□□□□ -1.3
SPTLC1P4-201ENST00000435997 TRBV20OR9-2A0A075B6H5 130 aa6.89□□□□□ -1.31
SPTLC1P4-201ENST00000435997 F2Z2F3 143 aa6.89□□□□□ -1.31
SPTLC1P4-201ENST00000435997 PHOX2AO14813 284 aa6.89□□□□□ -1.31
SPTLC1P4-201ENST00000435997 TRGC1P0CF51 173 aa6.89□□□□□ -1.31
SPTLC1P4-201ENST00000435997 CCL20P78556 96 aa6.89□□□□□ -1.31
SPTLC1P4-201ENST00000435997 RGS21Q2M5E4 152 aa6.89□□□□□ -1.31
SPTLC1P4-201ENST00000435997 TPPP3Q9BW30 176 aa6.89□□□□□ -1.31
SPTLC1P4-201ENST00000435997 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
SPTLC1P4-201ENST00000435997 LRP2P98164 4655 aa6.89□□□□□ -1.31
SPTLC1P4-201ENST00000435997 GVQW2A0A096LPI5 108 aaPredicted RBP6.88□□□□□ -1.31
SPTLC1P4-201ENST00000435997 PRR3P79522 188 aaKnown RBP6.88□□□□□ -1.31
SPTLC1P4-201ENST00000435997 WDR73Q6P4I2 378 aa6.88□□□□□ -1.31
SPTLC1P4-201ENST00000435997 C9orf62Q8N4C0 152 aa6.88□□□□□ -1.31
SPTLC1P4-201ENST00000435997 GNG13Q9P2W3 67 aa6.88□□□□□ -1.31
SPTLC1P4-201ENST00000435997 KANTRA0A1W2PQU2 76 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 XKRY2A2RUG3 117 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 UBE2L6O14933 153 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 NDUFS6O75380 124 aaKnown RBP6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 NTF3P20783 257 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 AMTP48728 403 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 GNG4P50150 75 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 SULT1A2P50226 295 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 RAB5CP51148 216 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 COX6A2Q02221 97 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 COTL1Q14019 142 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 LYZL1Q6UWQ5 148 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 C7orf33Q8WU49 177 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 LINC01600Q96MT4 127 aa6.87□□□□□ -1.31
SPTLC1P4-201ENST00000435997 RAB19A4D1S5 217 aa6.86□□□□□ -1.31
SPTLC1P4-201ENST00000435997 GAGE12HA6NDE8 117 aa6.86□□□□□ -1.31
SPTLC1P4-201ENST00000435997 RPS10P46783 165 aaKnown RBP6.86□□□□□ -1.31
SPTLC1P4-201ENST00000435997 EIF5AP63241 154 aaKnown RBP6.86□□□□□ -1.31
SPTLC1P4-201ENST00000435997 CFAP161Q6P656 301 aa6.86□□□□□ -1.31
SPTLC1P4-201ENST00000435997 Q6ZNX1 250 aa6.86□□□□□ -1.31
SPTLC1P4-201ENST00000435997 PRSS3P2Q8NHM4 247 aa6.86□□□□□ -1.31
SPTLC1P4-201ENST00000435997 PDE6DO43924 150 aa6.85□□□□□ -1.31
SPTLC1P4-201ENST00000435997 IFNA1P01562 189 aa6.85□□□□□ -1.31
SPTLC1P4-201ENST00000435997 MEF2BQ02080 365 aaPredicted RBP6.85□□□□□ -1.31
SPTLC1P4-201ENST00000435997 HIGD2BQ4VC39 106 aa6.85□□□□□ -1.31
SPTLC1P4-201ENST00000435997 GATD1Q8NB37 220 aa6.85□□□□□ -1.31
SPTLC1P4-201ENST00000435997 CHCHD10Q8WYQ3 142 aaPredicted RBP6.85□□□□□ -1.31
SPTLC1P4-201ENST00000435997 A0A096LNI7 61 aa6.84□□□□□ -1.31
SPTLC1P4-201ENST00000435997 TRAV26-2A0A0B4J265 109 aa6.84□□□□□ -1.31
SPTLC1P4-201ENST00000435997 H7C423 109 aa6.84□□□□□ -1.31
SPTLC1P4-201ENST00000435997 NCR2O95944 276 aa6.84□□□□□ -1.31
SPTLC1P4-201ENST00000435997 FOXI1Q12951 378 aa6.84□□□□□ -1.31
SPTLC1P4-201ENST00000435997 IGKV2-24A0A0C4DH68 120 aa6.83□□□□□ -1.32
SPTLC1P4-201ENST00000435997 BCL2P10415 239 aa6.83□□□□□ -1.32
SPTLC1P4-201ENST00000435997 MAJINQ3KP22 176 aa6.83□□□□□ -1.32
SPTLC1P4-201ENST00000435997 NUDT10Q8NFP7 164 aa6.83□□□□□ -1.32
SPTLC1P4-201ENST00000435997 RPL39LQ96EH5 51 aaKnown RBP6.83□□□□□ -1.32
SPTLC1P4-201ENST00000435997 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
SPTLC1P4-201ENST00000435997 NUDT11Q96G61 164 aa6.83□□□□□ -1.32
SPTLC1P4-201ENST00000435997 BIN3Q9NQY0 253 aa6.83□□□□□ -1.32
SPTLC1P4-201ENST00000435997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 IGKV3OR2-268A0A0C4DH90 116 aa6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 A0A0J9YXV3 536 aa6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 IGKV2-29A2NJV5 120 aaPredicted RBP6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 K7EN84 100 aa6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 FGF6P10767 208 aa6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 ZNF25P17030 456 aaPredicted RBP6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 ODF1Q14990 250 aa6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 TWIST1Q15672 202 aa6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 STPG4Q8N801 248 aa6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 RPP21Q9H633 154 aaKnown RBP6.82□□□□□ -1.32
SPTLC1P4-201ENST00000435997 FAM231BA6NCW3 169 aa6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 SDHAF1A6NFY7 115 aa6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 TEX46H3BTG2 121 aa6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 APCSP02743 223 aa6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 KRTAP10-8P60410 259 aa6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 AMMECR1LQ6DCA0 310 aa6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 OR5A1Q8NGJ0 315 aa6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 RNASE7Q9H1E1 156 aaKnown RBP6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 MED9Q9NWA0 146 aa6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 LINC00474Q9P2X8 69 aa6.81□□□□□ -1.32
SPTLC1P4-201ENST00000435997 TRBV6-5A0A0K0K1A5 114 aa6.8□□□□□ -1.32
SPTLC1P4-201ENST00000435997 ESDP10768 282 aa6.8□□□□□ -1.32
SPTLC1P4-201ENST00000435997 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1P4-201ENST00000435997 SRSF9Q13242 221 aaKnown RBP eCLIP6.8□□□□□ -1.32
SPTLC1P4-201ENST00000435997 EIF5AL1Q6IS14 154 aaKnown RBP6.8□□□□□ -1.32
SPTLC1P4-201ENST00000435997 SPINK6Q6UWN8 80 aa6.8□□□□□ -1.32
SPTLC1P4-201ENST00000435997 XCL1P47992 114 aa6.79□□□□□ -1.32
SPTLC1P4-201ENST00000435997 RNASEKQ6P5S7 137 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms