RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 HIST1H2BBP33778 126 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST1H2BDP58876 126 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST1H2BCP62807 126 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 Q0VG73 95 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST2H2BEQ16778 126 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 NTM-AS1Q6ZSK4 140 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST1H2BHQ93079 126 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST1H2BNQ99877 126 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 HIST1H2BMQ99879 126 aa15.99■□□□□ 0.15
SMARCAL1-208ENST00000434435 K7EMI3 77 aa15.98■□□□□ 0.15
SMARCAL1-208ENST00000434435 RAB5BP61020 215 aa15.98■□□□□ 0.15
SMARCAL1-208ENST00000434435 BAGE3Q86Y29 109 aa15.98■□□□□ 0.15
SMARCAL1-208ENST00000434435 TENM2Q9NT68 2774 aa15.98■□□□□ 0.15
SMARCAL1-208ENST00000434435 UBE2DNLQ8IWF7 75 aa15.96■□□□□ 0.15
SMARCAL1-208ENST00000434435 TMEM243Q9BU79 118 aa15.96■□□□□ 0.15
SMARCAL1-208ENST00000434435 MRPS16Q9Y3D3 137 aaKnown RBP15.96■□□□□ 0.15
SMARCAL1-208ENST00000434435 LINC00588Q9Y4M8 146 aa15.96■□□□□ 0.15
SMARCAL1-208ENST00000434435 TRAV8-6A0A0B4J262 113 aa15.95■□□□□ 0.14
SMARCAL1-208ENST00000434435 LINC01546A6NGU7 62 aa15.95■□□□□ 0.14
SMARCAL1-208ENST00000434435 LAGE3Q14657 143 aa15.95■□□□□ 0.14
SMARCAL1-208ENST00000434435 ORMDL2Q53FV1 153 aa15.95■□□□□ 0.14
SMARCAL1-208ENST00000434435 RNASEKQ6P5S7 137 aaKnown RBP15.95■□□□□ 0.14
SMARCAL1-208ENST00000434435 NIT1Q86X76 327 aa15.95■□□□□ 0.14
SMARCAL1-208ENST00000434435 AP5S1Q9NUS5 200 aa15.95■□□□□ 0.14
SMARCAL1-208ENST00000434435 LINC00614P0C842 121 aa15.94■□□□□ 0.14
SMARCAL1-208ENST00000434435 URB1-AS1Q96HZ7 61 aa15.94■□□□□ 0.14
SMARCAL1-208ENST00000434435 CHCHD7Q9BUK0 85 aa15.94■□□□□ 0.14
SMARCAL1-208ENST00000434435 PLECQ15149 4684 aaKnown RBP15.94■□□□□ 0.14
SMARCAL1-208ENST00000434435 ESDP10768 282 aa15.93■□□□□ 0.14
SMARCAL1-208ENST00000434435 CHCHD5Q9BSY4 110 aa15.93■□□□□ 0.14
SMARCAL1-208ENST00000434435 UBE2L6O14933 153 aa15.92■□□□□ 0.14
SMARCAL1-208ENST00000434435 CHCHD1Q96BP2 118 aaKnown RBP15.92■□□□□ 0.14
SMARCAL1-208ENST00000434435 TMEM18Q96B42 140 aa15.91■□□□□ 0.14
SMARCAL1-208ENST00000434435 UPK3BQ9BT76 320 aa15.91■□□□□ 0.14
SMARCAL1-208ENST00000434435 SERF1AO75920 110 aa15.9■□□□□ 0.14
SMARCAL1-208ENST00000434435 PKIAP61925 76 aa15.9■□□□□ 0.14
SMARCAL1-208ENST00000434435 WFDC10BQ8IUB3 73 aa15.9■□□□□ 0.14
SMARCAL1-208ENST00000434435 C20orf203Q8NBC4 194 aa15.9■□□□□ 0.14
SMARCAL1-208ENST00000434435 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.89■□□□□ 0.13
SMARCAL1-208ENST00000434435 IGKV2-29A2NJV5 120 aaPredicted RBP15.89■□□□□ 0.13
SMARCAL1-208ENST00000434435 H7C423 109 aa15.89■□□□□ 0.13
SMARCAL1-208ENST00000434435 G0S2P27469 103 aa15.89■□□□□ 0.13
SMARCAL1-208ENST00000434435 BTF3P20290 206 aaKnown RBP15.88■□□□□ 0.13
SMARCAL1-208ENST00000434435 GAGE6Q13070 117 aa15.88■□□□□ 0.13
SMARCAL1-208ENST00000434435 HSBP1O75506 76 aa15.87■□□□□ 0.13
SMARCAL1-208ENST00000434435 NDUFA6P56556 154 aa15.87■□□□□ 0.13
SMARCAL1-208ENST00000434435 LINC00310P59036 64 aa15.87■□□□□ 0.13
SMARCAL1-208ENST00000434435 LGALS9CQ6DKI2 356 aa15.87■□□□□ 0.13
SMARCAL1-208ENST00000434435 CYSLTR1Q9Y271 337 aa15.87■□□□□ 0.13
SMARCAL1-208ENST00000434435 TMEM262E9PQX1 116 aa15.86■□□□□ 0.13
SMARCAL1-208ENST00000434435 SMAGPQ0VAQ4 97 aa15.86■□□□□ 0.13
SMARCAL1-208ENST00000434435 SIVA1O15304 175 aa15.85■□□□□ 0.13
SMARCAL1-208ENST00000434435 RPL39P62891 51 aaKnown RBP15.85■□□□□ 0.13
SMARCAL1-208ENST00000434435 COA6Q5JTJ3 125 aaKnown RBP15.85■□□□□ 0.13
SMARCAL1-208ENST00000434435 AMMECR1LQ6DCA0 310 aa15.85■□□□□ 0.13
SMARCAL1-208ENST00000434435 C2orf66Q6UXQ4 117 aa15.85■□□□□ 0.13
SMARCAL1-208ENST00000434435 A0A087WX48 190 aa15.84■□□□□ 0.13
SMARCAL1-208ENST00000434435 HBDP02042 147 aa15.84■□□□□ 0.13
SMARCAL1-208ENST00000434435 LINC01549A6NIU2 74 aa15.83■□□□□ 0.12
SMARCAL1-208ENST00000434435 FGF6P10767 208 aa15.83■□□□□ 0.12
SMARCAL1-208ENST00000434435 PMCHL1Q16048 86 aa15.83■□□□□ 0.12
SMARCAL1-208ENST00000434435 MPV17L2Q567V2 206 aa15.83■□□□□ 0.12
SMARCAL1-208ENST00000434435 DNAH10OSP0CZ25 163 aa15.82■□□□□ 0.12
SMARCAL1-208ENST00000434435 ZNF25P17030 456 aaPredicted RBP15.82■□□□□ 0.12
SMARCAL1-208ENST00000434435 LINC01556Q5JQF7 62 aa15.82■□□□□ 0.12
SMARCAL1-208ENST00000434435 MRPL52Q86TS9 123 aaKnown RBP15.82■□□□□ 0.12
SMARCAL1-208ENST00000434435 LINC00476Q8WZB0 136 aa15.82■□□□□ 0.12
SMARCAL1-208ENST00000434435 TOMM6Q96B49 74 aa15.82■□□□□ 0.12
SMARCAL1-208ENST00000434435 TIMM21Q9BVV7 248 aa15.82■□□□□ 0.12
SMARCAL1-208ENST00000434435 A0A096LNJ9 63 aa15.81■□□□□ 0.12
SMARCAL1-208ENST00000434435 NUPR1O60356 82 aa15.81■□□□□ 0.12
SMARCAL1-208ENST00000434435 S100A6P06703 90 aa15.81■□□□□ 0.12
SMARCAL1-208ENST00000434435 Q9H8V8 135 aa15.81■□□□□ 0.12
SMARCAL1-208ENST00000434435 SPANXA1Q9NS26 97 aa15.81■□□□□ 0.12
SMARCAL1-208ENST00000434435 UBE2D4Q9Y2X8 147 aa15.81■□□□□ 0.12
SMARCAL1-208ENST00000434435 A0A1B0GUV1 79 aa15.8■□□□□ 0.12
SMARCAL1-208ENST00000434435 LY6G6CO95867 125 aa15.8■□□□□ 0.12
SMARCAL1-208ENST00000434435 IGHV3-30P01768 117 aa15.8■□□□□ 0.12
SMARCAL1-208ENST00000434435 IGHV3-33P01772 117 aa15.8■□□□□ 0.12
SMARCAL1-208ENST00000434435 IGHV3-30-3P0DP02 117 aa15.8■□□□□ 0.12
SMARCAL1-208ENST00000434435 IGHV3-30-5P0DP03 117 aa15.8■□□□□ 0.12
SMARCAL1-208ENST00000434435 RBX1P62877 108 aa15.8■□□□□ 0.12
SMARCAL1-208ENST00000434435 TMEM101Q96IK0 257 aa15.8■□□□□ 0.12
SMARCAL1-208ENST00000434435 LYSTQ99698 3801 aa15.8■□□□□ 0.12
SMARCAL1-208ENST00000434435 ALMS1Q8TCU4 4167 aa15.79■□□□□ 0.12
SMARCAL1-208ENST00000434435 DGAT2L7PQ6IED9 249 aa15.79■□□□□ 0.12
SMARCAL1-208ENST00000434435 FAM19A2Q8N3H0 131 aa15.79■□□□□ 0.12
SMARCAL1-208ENST00000434435 Q8N3U1 123 aa15.79■□□□□ 0.12
SMARCAL1-208ENST00000434435 OR5A1Q8NGJ0 315 aa15.79■□□□□ 0.12
SMARCAL1-208ENST00000434435 Q8N976 141 aa15.78■□□□□ 0.12
SMARCAL1-208ENST00000434435 PYGO1Q9Y3Y4 419 aa15.78■□□□□ 0.12
SMARCAL1-208ENST00000434435 CSDC2Q9Y534 153 aaKnown RBP15.78■□□□□ 0.12
SMARCAL1-208ENST00000434435 SCGB3A1Q96QR1 104 aa15.77■□□□□ 0.12
SMARCAL1-208ENST00000434435 IGLV4-60A0A075B6I1 120 aa15.76■□□□□ 0.11
SMARCAL1-208ENST00000434435 TIMM17AQ99595 171 aa15.76■□□□□ 0.11
SMARCAL1-208ENST00000434435 TMA7Q9Y2S6 64 aaKnown RBP15.76■□□□□ 0.11
SMARCAL1-208ENST00000434435 VPS13DQ5THJ4 4388 aa15.76■□□□□ 0.11
SMARCAL1-208ENST00000434435 ANGP03950 147 aaKnown RBP15.75■□□□□ 0.11
SMARCAL1-208ENST00000434435 PDZD11Q5EBL8 140 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms