RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 C20orf78Q9BR46 151 aa9.86□□□□□ -0.83
RTN1-204ENST00000432103 EDA2RQ9HAV5 297 aa9.86□□□□□ -0.83
RTN1-204ENST00000432103 NXT2Q9NPJ8 142 aaKnown RBP9.86□□□□□ -0.83
RTN1-204ENST00000432103 MUC4Q99102 2169 aa9.86□□□□□ -0.83
RTN1-204ENST00000432103 FCER1GP30273 86 aa9.86□□□□□ -0.83
RTN1-204ENST00000432103 LINC00315P59091 139 aa9.86□□□□□ -0.83
RTN1-204ENST00000432103 DEFB121Q5J5C9 76 aa9.86□□□□□ -0.83
RTN1-204ENST00000432103 Q6ZTI0 123 aa9.86□□□□□ -0.83
RTN1-204ENST00000432103 PCP2Q8IVA1 136 aa9.86□□□□□ -0.83
RTN1-204ENST00000432103 C18orf15Q96N68 181 aa9.86□□□□□ -0.83
RTN1-204ENST00000432103 IGHV4-28A0A0C4DH34 117 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 NPYP01303 97 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 SUMO4Q6EEV6 95 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 TM2D2Q9BX73 214 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 TRAV26-2A0A0B4J265 109 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 PRSS47A8MTI9 375 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 SMKR1H3BMG3 65 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 K7EIL1 84 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 ATP5LO75964 103 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 GAGE7O76087 117 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 GAGE12FP0CL80 117 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 GAGE12GP0CL81 117 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 GAGE12IP0CL82 117 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 NMUP48645 174 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 TAL2Q16559 108 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 HHLA3Q9XRX5 114 aa9.85□□□□□ -0.83
RTN1-204ENST00000432103 ODF1Q14990 250 aa9.84□□□□□ -0.83
RTN1-204ENST00000432103 Q8NAQ8 132 aa9.84□□□□□ -0.83
RTN1-204ENST00000432103 SPATA25Q9BR10 227 aa9.84□□□□□ -0.83
RTN1-204ENST00000432103 DKK2Q9UBU2 259 aa9.84□□□□□ -0.83
RTN1-204ENST00000432103 SPART-AS1P0CW21 52 aa9.83□□□□□ -0.84
RTN1-204ENST00000432103 LINC00612Q8N6U2 182 aa9.83□□□□□ -0.84
RTN1-204ENST00000432103 NRACQ8N912 160 aa9.83□□□□□ -0.84
RTN1-204ENST00000432103 PHLDA1Q8WV24 401 aaPredicted RBP9.83□□□□□ -0.84
RTN1-204ENST00000432103 RAB37Q96AX2 223 aa9.83□□□□□ -0.84
RTN1-204ENST00000432103 IGHV3-53P01767 116 aa9.83□□□□□ -0.84
RTN1-204ENST00000432103 SUMO2P61956 95 aaKnown RBP9.83□□□□□ -0.84
RTN1-204ENST00000432103 F8W1H4 67 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 K7EMI3 77 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 M0QY20 66 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 FAM222AQ5U5X8 452 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 DNAJC30Q96LL9 226 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 CHAC1Q9BUX1 264 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 PKD1L1Q8TDX9 2849 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 IGHV3-73A0A0B4J1V6 119 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 TRBV6-5A0A0K0K1A5 114 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 IGKCP01834 107 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 PRB2P02812 416 aaPredicted RBP9.82□□□□□ -0.84
RTN1-204ENST00000432103 RPL32P62910 135 aaKnown RBP9.82□□□□□ -0.84
RTN1-204ENST00000432103 Q8N8P6 123 aa9.82□□□□□ -0.84
RTN1-204ENST00000432103 E9PLD3 99 aa9.81□□□□□ -0.84
RTN1-204ENST00000432103 J3QR89 54 aa9.81□□□□□ -0.84
RTN1-204ENST00000432103 DPM2O94777 84 aa9.81□□□□□ -0.84
RTN1-204ENST00000432103 DEFB130BP0DP73 79 aa9.81□□□□□ -0.84
RTN1-204ENST00000432103 DEFB130AP0DP74 79 aa9.81□□□□□ -0.84
RTN1-204ENST00000432103 CEND1Q8N111 149 aa9.81□□□□□ -0.84
RTN1-204ENST00000432103 NAA38Q9BRA0 125 aaKnown RBP9.81□□□□□ -0.84
RTN1-204ENST00000432103 C11orf68Q9H3H3 251 aaKnown RBP9.81□□□□□ -0.84
RTN1-204ENST00000432103 TRGV4A0A0C4DH28 118 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 TRBV10-1A0A0K0K1A3 114 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 GATA1P15976 413 aaPredicted RBP9.8□□□□□ -0.84
RTN1-204ENST00000432103 GCSHP23434 173 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 FXYD2P54710 66 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 ZNF479Q96JC4 524 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 TNFRSF18Q9Y5U5 241 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 TRBV25-1A0A075B6N4 114 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 VCYO14598 125 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 DAD1P61803 113 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 SBSPONQ8IVN8 264 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 SMIM2Q9BVW6 85 aa9.8□□□□□ -0.84
RTN1-204ENST00000432103 IGKV2D-26A0A0A0MRZ7 120 aa9.79□□□□□ -0.84
RTN1-204ENST00000432103 TRBV6-4A0A1B0GX49 114 aa9.79□□□□□ -0.84
RTN1-204ENST00000432103 GAS8-AS1O95177 125 aa9.79□□□□□ -0.84
RTN1-204ENST00000432103 MRAPQ8TCY5 172 aa9.79□□□□□ -0.84
RTN1-204ENST00000432103 RPL39LQ96EH5 51 aaKnown RBP9.79□□□□□ -0.84
RTN1-204ENST00000432103 KIR2DL4Q99706 377 aa9.79□□□□□ -0.84
RTN1-204ENST00000432103 SIGMAR1Q99720 223 aa9.79□□□□□ -0.84
RTN1-204ENST00000432103 TM2D3Q9BRN9 247 aa9.79□□□□□ -0.84
RTN1-204ENST00000432103 K7EQD1 137 aa9.78□□□□□ -0.84
RTN1-204ENST00000432103 PRSS1P07477 247 aa9.78□□□□□ -0.84
RTN1-204ENST00000432103 RPL24P83731 157 aaKnown RBP9.78□□□□□ -0.84
RTN1-204ENST00000432103 ORMDL2Q53FV1 153 aa9.78□□□□□ -0.84
RTN1-204ENST00000432103 PRADC1Q9BSG0 188 aa9.78□□□□□ -0.84
RTN1-204ENST00000432103 IGLV2-18A0A075B6J9 118 aa9.77□□□□□ -0.84
RTN1-204ENST00000432103 SDHAF1A6NFY7 115 aa9.77□□□□□ -0.84
RTN1-204ENST00000432103 DEFB4AO15263 64 aa9.77□□□□□ -0.84
RTN1-204ENST00000432103 RPL36AP83881 106 aaKnown RBP9.77□□□□□ -0.84
RTN1-204ENST00000432103 RHOHQ15669 191 aa9.77□□□□□ -0.84
RTN1-204ENST00000432103 RPL36ALQ969Q0 106 aaKnown RBP9.77□□□□□ -0.84
RTN1-204ENST00000432103 IGLL5B9A064 214 aa9.77□□□□□ -0.85
RTN1-204ENST00000432103 ATP5G1P05496 136 aa9.77□□□□□ -0.85
RTN1-204ENST00000432103 LAGE3Q14657 143 aa9.77□□□□□ -0.85
RTN1-204ENST00000432103 RETNQ9HD89 108 aa9.77□□□□□ -0.85
RTN1-204ENST00000432103 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
RTN1-204ENST00000432103 TRBV27A0A0K0K1C4 114 aa9.76□□□□□ -0.85
RTN1-204ENST00000432103 LINC01549A6NIU2 74 aa9.76□□□□□ -0.85
RTN1-204ENST00000432103 POLR2KP53803 58 aaKnown RBP9.76□□□□□ -0.85
RTN1-204ENST00000432103 A0A1B0GWB2 263 aa9.76□□□□□ -0.85
RTN1-204ENST00000432103 I3L3M4 83 aa9.76□□□□□ -0.85
RTN1-204ENST00000432103 ZC2HC1BQ5TFG8 222 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms