RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 TWIST1Q15672 202 aa9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 NUDT10Q8NFP7 164 aa9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 NUDT11Q96G61 164 aa9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 DPH3P1Q9H4G8 78 aa9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 NIT2Q9NQR4 276 aa9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 MEF2BQ02080 365 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 RPL39LQ96EH5 51 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-205ENST00000431889 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-205ENST00000431889 A0A087WYN8 130 aa9.06□□□□□ -0.96
SMARCE1-205ENST00000431889 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-205ENST00000431889 EIF5AP63241 154 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-205ENST00000431889 ODF1Q14990 250 aa9.06□□□□□ -0.96
SMARCE1-205ENST00000431889 GATD1Q8NB37 220 aa9.06□□□□□ -0.96
SMARCE1-205ENST00000431889 CLRN3Q8NCR9 226 aa9.06□□□□□ -0.96
SMARCE1-205ENST00000431889 IGHV3-64A0A075B6Q5 118 aa9.05□□□□□ -0.96
SMARCE1-205ENST00000431889 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
SMARCE1-205ENST00000431889 K7EN84 100 aa9.05□□□□□ -0.96
SMARCE1-205ENST00000431889 TRGC1P0CF51 173 aa9.05□□□□□ -0.96
SMARCE1-205ENST00000431889 COTL1Q14019 142 aa9.05□□□□□ -0.96
SMARCE1-205ENST00000431889 Q6ZNX1 250 aa9.05□□□□□ -0.96
SMARCE1-205ENST00000431889 C15orf56Q8N910 161 aa9.05□□□□□ -0.96
SMARCE1-205ENST00000431889 AP5S1Q9NUS5 200 aa9.05□□□□□ -0.96
SMARCE1-205ENST00000431889 F2Z2F3 143 aa9.04□□□□□ -0.96
SMARCE1-205ENST00000431889 MT1HL1P0DM35 61 aa9.04□□□□□ -0.96
SMARCE1-205ENST00000431889 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-205ENST00000431889 COX6A2Q02221 97 aa9.04□□□□□ -0.96
SMARCE1-205ENST00000431889 TRAV8-4A0A0B4J246 113 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 IGKV2-24A0A0C4DH68 120 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 A0A1B0GUV1 79 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 XKRY2A2RUG3 117 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 PHOX2AO14813 284 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 BCL2P10415 239 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 PDE6DO43924 150 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 CTRLP40313 264 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 WDR73Q6P4I2 378 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 RNASEKQ6P5S7 137 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 C9orf62Q8N4C0 152 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 LYPD6BQ8NI32 183 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 OCC1Q8TAD7 63 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 SPACA4Q8TDM5 124 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 LINC00526Q96FQ7 95 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 PGLYRP4Q96LB8 373 aa9.03□□□□□ -0.96
SMARCE1-205ENST00000431889 TEX46H3BTG2 121 aa9.02□□□□□ -0.97
SMARCE1-205ENST00000431889 GAS8-AS1O95177 125 aa9.02□□□□□ -0.97
SMARCE1-205ENST00000431889 CIRBPQ14011 172 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-205ENST00000431889 PRSS3P2Q8NHM4 247 aa9.02□□□□□ -0.97
SMARCE1-205ENST00000431889 GTSF1Q8WW33 167 aa9.02□□□□□ -0.97
SMARCE1-205ENST00000431889 RPP21Q9H633 154 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-205ENST00000431889 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-205ENST00000431889 MAJINQ3KP22 176 aa9.01□□□□□ -0.97
SMARCE1-205ENST00000431889 AMMECR1LQ6DCA0 310 aa9.01□□□□□ -0.97
SMARCE1-205ENST00000431889 CHCHD10Q8WYQ3 142 aaPredicted RBP9.01□□□□□ -0.97
SMARCE1-205ENST00000431889 TNXBP22105 4242 aa9.01□□□□□ -0.97
SMARCE1-205ENST00000431889 CEBPGP53567 150 aa9□□□□□ -0.97
SMARCE1-205ENST00000431889 EIF5AL1Q6IS14 154 aaKnown RBP8.99□□□□□ -0.97
SMARCE1-205ENST00000431889 SMIM12Q96EX1 92 aa8.99□□□□□ -0.97
SMARCE1-205ENST00000431889 APCSP02743 223 aa8.98□□□□□ -0.97
SMARCE1-205ENST00000431889 FGF6P10767 208 aa8.98□□□□□ -0.97
SMARCE1-205ENST00000431889 RPS10P46783 165 aaKnown RBP8.98□□□□□ -0.97
SMARCE1-205ENST00000431889 XCL1P47992 114 aa8.98□□□□□ -0.97
SMARCE1-205ENST00000431889 A0A096LNI7 61 aa8.97□□□□□ -0.97
SMARCE1-205ENST00000431889 SDHAF1A6NFY7 115 aa8.97□□□□□ -0.97
SMARCE1-205ENST00000431889 Q6ZRU5 148 aa8.97□□□□□ -0.97
SMARCE1-205ENST00000431889 STPG4Q8N801 248 aa8.97□□□□□ -0.97
SMARCE1-205ENST00000431889 CNFNQ9BYD5 112 aa8.97□□□□□ -0.97
SMARCE1-205ENST00000431889 BIN3Q9NQY0 253 aa8.97□□□□□ -0.97
SMARCE1-205ENST00000431889 PMCHP20382 165 aa8.96□□□□□ -0.97
SMARCE1-205ENST00000431889 FOXI1Q12951 378 aa8.96□□□□□ -0.97
SMARCE1-205ENST00000431889 PLAC8Q9NZF1 115 aa8.96□□□□□ -0.97
SMARCE1-205ENST00000431889 FAM231BA6NCW3 169 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 GATCO43716 136 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 NDUFS6O75380 124 aaKnown RBP8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 CFAP161Q6P656 301 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 ALKAL2Q6UX46 152 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 SLC51BQ86UW2 128 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 TMEM242Q9NWH2 141 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 LOC100996750A0A140TA64 210 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 CCL25O15444 150 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 SMIM15Q7Z3B0 74 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 KRTAP4-6Q9BYQ5 205 aa8.95□□□□□ -0.98
SMARCE1-205ENST00000431889 RNF185Q96GF1 192 aa8.94□□□□□ -0.98
SMARCE1-205ENST00000431889 hCG_2014768A0A024R1R8 64 aa8.93□□□□□ -0.98
SMARCE1-205ENST00000431889 SMKR1H3BMG3 65 aa8.93□□□□□ -0.98
SMARCE1-205ENST00000431889 TSHBP01222 138 aa8.93□□□□□ -0.98
SMARCE1-205ENST00000431889 RNASE13Q5GAN3 156 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-205ENST00000431889 TCTE3Q8IZS6 198 aa8.93□□□□□ -0.98
SMARCE1-205ENST00000431889 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-205ENST00000431889 LINC00959A0A1B0GUT2 108 aa8.92□□□□□ -0.98
SMARCE1-205ENST00000431889 I3L3M4 83 aa8.92□□□□□ -0.98
SMARCE1-205ENST00000431889 PRR3P79522 188 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-205ENST00000431889 OR5A1Q8NGJ0 315 aa8.92□□□□□ -0.98
SMARCE1-205ENST00000431889 NCR2O95944 276 aa8.91□□□□□ -0.98
SMARCE1-205ENST00000431889 BTF3L4Q96K17 158 aa8.91□□□□□ -0.98
SMARCE1-205ENST00000431889 LRP2P98164 4655 aa8.91□□□□□ -0.98
SMARCE1-205ENST00000431889 TMEM101Q96IK0 257 aa8.9□□□□□ -0.98
SMARCE1-205ENST00000431889 A8MWL6 223 aa8.9□□□□□ -0.99
SMARCE1-205ENST00000431889 AMN1Q8IY45 258 aa8.9□□□□□ -0.99
SMARCE1-205ENST00000431889 ST20Q9HBF5 79 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms