RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 COL6A5A8TX70 2615 aa9.3□□□□□ -0.92
DDX56-204ENST00000431640 IGHV3-73A0A0B4J1V6 119 aa9.29□□□□□ -0.92
DDX56-204ENST00000431640 MAPKAPK5-AS1Q8N8E1 139 aa9.29□□□□□ -0.92
DDX56-204ENST00000431640 TM2D2Q9BX73 214 aa9.29□□□□□ -0.92
DDX56-204ENST00000431640 IGLV4-69A0A075B6H9 119 aa9.29□□□□□ -0.92
DDX56-204ENST00000431640 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
DDX56-204ENST00000431640 PRM2P04554 102 aa9.29□□□□□ -0.92
DDX56-204ENST00000431640 SMIM13P0DJ93 91 aa9.29□□□□□ -0.92
DDX56-204ENST00000431640 Q6ZVH6 145 aa9.29□□□□□ -0.92
DDX56-204ENST00000431640 MRPL16Q9NX20 251 aaKnown RBP9.29□□□□□ -0.92
DDX56-204ENST00000431640 C9orf118A6NHY6 69 aa9.28□□□□□ -0.92
DDX56-204ENST00000431640 AZU1P20160 251 aa9.28□□□□□ -0.92
DDX56-204ENST00000431640 NFE4Q86UQ8 179 aa9.28□□□□□ -0.92
DDX56-204ENST00000431640 CEND1Q8N111 149 aa9.28□□□□□ -0.92
DDX56-204ENST00000431640 IL17DQ8TAD2 202 aa9.28□□□□□ -0.92
DDX56-204ENST00000431640 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
DDX56-204ENST00000431640 PRADC1Q9BSG0 188 aa9.28□□□□□ -0.92
DDX56-204ENST00000431640 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
DDX56-204ENST00000431640 VCX2Q9H322 139 aa9.28□□□□□ -0.92
DDX56-204ENST00000431640 IGHV3OR16-12A0A075B7B8 117 aa9.27□□□□□ -0.93
DDX56-204ENST00000431640 CIDEAO60543 219 aa9.27□□□□□ -0.93
DDX56-204ENST00000431640 GCSHP23434 173 aa9.27□□□□□ -0.93
DDX56-204ENST00000431640 OR4C5Q8NGB2 326 aa9.27□□□□□ -0.93
DDX56-204ENST00000431640 DEFB104AQ8WTQ1 72 aa9.27□□□□□ -0.93
DDX56-204ENST00000431640 CCL25O15444 150 aa9.26□□□□□ -0.93
DDX56-204ENST00000431640 LINC00482Q8N8I6 264 aa9.26□□□□□ -0.93
DDX56-204ENST00000431640 RNASE8Q8TDE3 154 aaKnown RBP9.26□□□□□ -0.93
DDX56-204ENST00000431640 WNK1Q9H4A3 2382 aa9.26□□□□□ -0.93
DDX56-204ENST00000431640 DAZ2Q13117 558 aaKnown RBP9.25□□□□□ -0.93
DDX56-204ENST00000431640 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
DDX56-204ENST00000431640 Q6ZSN1 163 aa9.25□□□□□ -0.93
DDX56-204ENST00000431640 HIST1H4GQ99525 98 aa9.25□□□□□ -0.93
DDX56-204ENST00000431640 SPANXA1Q9NS26 97 aa9.25□□□□□ -0.93
DDX56-204ENST00000431640 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
DDX56-204ENST00000431640 CMYA5Q8N3K9 4069 aa9.25□□□□□ -0.93
DDX56-204ENST00000431640 IGLV4-3A0A075B6K6 122 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 TRGV1A0A0A0MS02 117 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 TRBV10-1A0A0K0K1A3 114 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 PF4P02776 101 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 COTL1Q14019 142 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 C16orf74Q96GX8 76 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 TRAV4A0A0B4J268 109 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 ZNF815PA8K554 130 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 GTF2H5Q6ZYL4 71 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 ZNRF2Q8NHG8 242 aa9.24□□□□□ -0.93
DDX56-204ENST00000431640 INSL3P51460 131 aa9.23□□□□□ -0.93
DDX56-204ENST00000431640 FXYD2P54710 66 aa9.23□□□□□ -0.93
DDX56-204ENST00000431640 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
DDX56-204ENST00000431640 C3orf56Q8N813 242 aa9.23□□□□□ -0.93
DDX56-204ENST00000431640 AMELXQ99217 191 aa9.23□□□□□ -0.93
DDX56-204ENST00000431640 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
DDX56-204ENST00000431640 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
DDX56-204ENST00000431640 EMP1P54849 157 aa9.22□□□□□ -0.93
DDX56-204ENST00000431640 OPRPNQ99935 248 aaPredicted RBP9.22□□□□□ -0.93
DDX56-204ENST00000431640 CHCHD7Q9BUK0 85 aa9.22□□□□□ -0.93
DDX56-204ENST00000431640 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.93
DDX56-204ENST00000431640 TMEM223A0PJW6 202 aa9.21□□□□□ -0.93
DDX56-204ENST00000431640 H3BUT2 72 aa9.21□□□□□ -0.93
DDX56-204ENST00000431640 LEPROTO15243 131 aa9.21□□□□□ -0.93
DDX56-204ENST00000431640 RPL35AP18077 110 aaKnown RBP9.21□□□□□ -0.93
DDX56-204ENST00000431640 RPL36AP83881 106 aaKnown RBP9.21□□□□□ -0.93
DDX56-204ENST00000431640 SMAGPQ0VAQ4 97 aa9.21□□□□□ -0.93
DDX56-204ENST00000431640 RRN3P1Q2M238 152 aa9.21□□□□□ -0.93
DDX56-204ENST00000431640 SHISA2Q6UWI4 295 aa9.21□□□□□ -0.93
DDX56-204ENST00000431640 RPL36ALQ969Q0 106 aaKnown RBP9.21□□□□□ -0.93
DDX56-204ENST00000431640 OVOL2Q9BRP0 275 aa9.21□□□□□ -0.93
DDX56-204ENST00000431640 TIMM21Q9BVV7 248 aa9.21□□□□□ -0.93
DDX56-204ENST00000431640 NACAE9PAV3 2078 aa9.21□□□□□ -0.94
DDX56-204ENST00000431640 LGALS3P17931 250 aaKnown RBP9.2□□□□□ -0.94
DDX56-204ENST00000431640 DAZ4Q86SG3 579 aaKnown RBP9.2□□□□□ -0.94
DDX56-204ENST00000431640 CSNK1G2-AS1Q8NCQ2 148 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 RAB37Q96AX2 223 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 PLEKHB2Q96CS7 222 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 DAZ3Q9NR90 486 aaKnown RBP9.2□□□□□ -0.94
DDX56-204ENST00000431640 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 PKD1L1Q8TDX9 2849 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 DNHD1Q96M86 4753 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 TMEM238LA0A1B0GVL6 79 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 A6NJY4 79 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 J3QQQ9 107 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 K7EQD1 137 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 MRPS36P82909 103 aaKnown RBP9.2□□□□□ -0.94
DDX56-204ENST00000431640 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.94
DDX56-204ENST00000431640 SAMD5Q5TGI4 173 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 Q6ZTI0 123 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 ZNF479Q96JC4 524 aa9.2□□□□□ -0.94
DDX56-204ENST00000431640 NOP10Q9NPE3 64 aaKnown RBP9.2□□□□□ -0.94
DDX56-204ENST00000431640 NHP2Q9NX24 153 aaKnown RBP9.2□□□□□ -0.94
DDX56-204ENST00000431640 A0A0J9YXV3 536 aa9.19□□□□□ -0.94
DDX56-204ENST00000431640 A0A1W2PPM0 123 aa9.19□□□□□ -0.94
DDX56-204ENST00000431640 FABP2P12104 132 aa9.19□□□□□ -0.94
DDX56-204ENST00000431640 ZNF22P17026 224 aaPredicted RBP9.19□□□□□ -0.94
DDX56-204ENST00000431640 C12orf74Q32Q52 190 aa9.19□□□□□ -0.94
DDX56-204ENST00000431640 C9orf66Q5T8R8 295 aa9.19□□□□□ -0.94
DDX56-204ENST00000431640 SPANXB1Q9NS25 103 aaPredicted RBP9.19□□□□□ -0.94
DDX56-204ENST00000431640 Q9UF83 564 aa9.19□□□□□ -0.94
DDX56-204ENST00000431640 TINCRA0A1B0GVN0 87 aa9.18□□□□□ -0.94
DDX56-204ENST00000431640 DGAT2L7PQ6IED9 249 aa9.18□□□□□ -0.94
DDX56-204ENST00000431640 PHLDA1Q8WV24 401 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms