RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 TMEM262E9PQX1 116 aa12.46□□□□□ -0.41
RFTN1-202ENST00000431547 VCYO14598 125 aa12.46□□□□□ -0.41
RFTN1-202ENST00000431547 COX19Q49B96 90 aa12.46□□□□□ -0.41
RFTN1-202ENST00000431547 ATRAIDQ6UW56 229 aa12.46□□□□□ -0.41
RFTN1-202ENST00000431547 DEFB104AQ8WTQ1 72 aa12.46□□□□□ -0.41
RFTN1-202ENST00000431547 TMEM243Q9BU79 118 aa12.46□□□□□ -0.41
RFTN1-202ENST00000431547 GNB1LQ9BYB4 327 aa12.46□□□□□ -0.41
RFTN1-202ENST00000431547 A0A087WX48 190 aa12.45□□□□□ -0.42
RFTN1-202ENST00000431547 IBA57-AS1B1ANH7 110 aa12.45□□□□□ -0.42
RFTN1-202ENST00000431547 AMTP48728 403 aa12.45□□□□□ -0.42
RFTN1-202ENST00000431547 RPL32P62910 135 aaKnown RBP12.45□□□□□ -0.42
RFTN1-202ENST00000431547 Q8N3U1 123 aa12.45□□□□□ -0.42
RFTN1-202ENST00000431547 RTL8CO15255 209 aa12.44□□□□□ -0.42
RFTN1-202ENST00000431547 HLA-DQA1P01909 254 aa12.44□□□□□ -0.42
RFTN1-202ENST00000431547 ELOBQ15370 118 aa12.44□□□□□ -0.42
RFTN1-202ENST00000431547 PRELID3AQ96N28 172 aa12.44□□□□□ -0.42
RFTN1-202ENST00000431547 LAMTOR2Q9Y2Q5 125 aa12.44□□□□□ -0.42
RFTN1-202ENST00000431547 TSHBP01222 138 aa12.43□□□□□ -0.42
RFTN1-202ENST00000431547 NPYP01303 97 aa12.43□□□□□ -0.42
RFTN1-202ENST00000431547 TGIF2-C20orf24A0A0A6YYL0 155 aa12.42□□□□□ -0.42
RFTN1-202ENST00000431547 APCSP02743 223 aa12.42□□□□□ -0.42
RFTN1-202ENST00000431547 GAGE6Q13070 117 aa12.42□□□□□ -0.42
RFTN1-202ENST00000431547 LAGE3Q14657 143 aa12.42□□□□□ -0.42
RFTN1-202ENST00000431547 NFE4Q86UQ8 179 aa12.42□□□□□ -0.42
RFTN1-202ENST00000431547 PRSS47A8MTI9 375 aa12.41□□□□□ -0.42
RFTN1-202ENST00000431547 MT-ND6P03923 174 aa12.41□□□□□ -0.42
RFTN1-202ENST00000431547 MPV17L2Q567V2 206 aa12.41□□□□□ -0.42
RFTN1-202ENST00000431547 LINC00336Q6ZUF6 198 aa12.41□□□□□ -0.42
RFTN1-202ENST00000431547 KIR2DL4Q99706 377 aa12.41□□□□□ -0.42
RFTN1-202ENST00000431547 A0A1B0GUV1 79 aa12.4□□□□□ -0.42
RFTN1-202ENST00000431547 H7C423 109 aa12.4□□□□□ -0.42
RFTN1-202ENST00000431547 UBE2L6O14933 153 aa12.4□□□□□ -0.42
RFTN1-202ENST00000431547 ESDP10768 282 aa12.4□□□□□ -0.42
RFTN1-202ENST00000431547 RBX1P62877 108 aa12.4□□□□□ -0.42
RFTN1-202ENST00000431547 YPEL4Q96NS1 127 aa12.4□□□□□ -0.42
RFTN1-202ENST00000431547 SMIM2Q9BVW6 85 aa12.4□□□□□ -0.42
RFTN1-202ENST00000431547 SMCO4Q9NRQ5 59 aa12.4□□□□□ -0.42
RFTN1-202ENST00000431547 TCAPO15273 167 aa12.39□□□□□ -0.43
RFTN1-202ENST00000431547 FCER1GP30273 86 aa12.39□□□□□ -0.43
RFTN1-202ENST00000431547 Q6ZRN7 208 aaPredicted RBP12.39□□□□□ -0.43
RFTN1-202ENST00000431547 Q8N976 141 aa12.39□□□□□ -0.43
RFTN1-202ENST00000431547 KLK12Q9UKR0 248 aa12.39□□□□□ -0.43
RFTN1-202ENST00000431547 DNAH2Q9P225 4427 aa12.38□□□□□ -0.43
RFTN1-202ENST00000431547 TRAV8-3A0A0A6YYJ7 113 aa12.38□□□□□ -0.43
RFTN1-202ENST00000431547 KIAA1644Q3SXP7 199 aa12.37□□□□□ -0.43
RFTN1-202ENST00000431547 CBLN2Q8IUK8 224 aa12.37□□□□□ -0.43
RFTN1-202ENST00000431547 MRPL18Q9H0U6 180 aaKnown RBP12.37□□□□□ -0.43
RFTN1-202ENST00000431547 MAP1LC3AQ9H492 121 aa12.37□□□□□ -0.43
RFTN1-202ENST00000431547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.36□□□□□ -0.43
RFTN1-202ENST00000431547 IGKV2-29A2NJV5 120 aaPredicted RBP12.36□□□□□ -0.43
RFTN1-202ENST00000431547 PRSS29PA6NIE9 313 aa12.36□□□□□ -0.43
RFTN1-202ENST00000431547 ANGP03950 147 aaKnown RBP12.36□□□□□ -0.43
RFTN1-202ENST00000431547 Q0VG73 95 aa12.35□□□□□ -0.43
RFTN1-202ENST00000431547 FABP9Q0Z7S8 132 aa12.35□□□□□ -0.43
RFTN1-202ENST00000431547 UBE2WQ96B02 151 aa12.35□□□□□ -0.43
RFTN1-202ENST00000431547 Q9HAA7 133 aa12.35□□□□□ -0.43
RFTN1-202ENST00000431547 DNAH10Q8IVF4 4471 aa12.35□□□□□ -0.43
RFTN1-202ENST00000431547 IGLV4-60A0A075B6I1 120 aa12.34□□□□□ -0.43
RFTN1-202ENST00000431547 LOC389332A0A1B0GUA5 103 aa12.34□□□□□ -0.43
RFTN1-202ENST00000431547 FGF6P10767 208 aa12.34□□□□□ -0.43
RFTN1-202ENST00000431547 AMMECR1LQ6DCA0 310 aa12.34□□□□□ -0.43
RFTN1-202ENST00000431547 ENHOQ6UWT2 76 aa12.34□□□□□ -0.43
RFTN1-202ENST00000431547 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
RFTN1-202ENST00000431547 ALKBH7Q9BT30 221 aaPredicted RBP12.34□□□□□ -0.43
RFTN1-202ENST00000431547 PRR34Q9NV39 138 aa12.34□□□□□ -0.43
RFTN1-202ENST00000431547 TRAPPC1Q9Y5R8 145 aa12.34□□□□□ -0.43
RFTN1-202ENST00000431547 ZNF25P17030 456 aaPredicted RBP12.33□□□□□ -0.44
RFTN1-202ENST00000431547 LINC00269Q8N2A0 174 aa12.33□□□□□ -0.44
RFTN1-202ENST00000431547 Q8N8P6 123 aa12.33□□□□□ -0.44
RFTN1-202ENST00000431547 TM2D2Q9BX73 214 aa12.33□□□□□ -0.44
RFTN1-202ENST00000431547 CRPP02741 224 aa12.32□□□□□ -0.44
RFTN1-202ENST00000431547 RAB5AP20339 215 aa12.32□□□□□ -0.44
RFTN1-202ENST00000431547 TNP2Q05952 138 aa12.32□□□□□ -0.44
RFTN1-202ENST00000431547 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
RFTN1-202ENST00000431547 MRPL52Q86TS9 123 aaKnown RBP12.32□□□□□ -0.44
RFTN1-202ENST00000431547 MIAQ16674 131 aa12.31□□□□□ -0.44
RFTN1-202ENST00000431547 TMEM18Q96B42 140 aa12.31□□□□□ -0.44
RFTN1-202ENST00000431547 RMI2Q96E14 147 aa12.31□□□□□ -0.44
RFTN1-202ENST00000431547 NXT2Q9NPJ8 142 aaKnown RBP12.31□□□□□ -0.44
RFTN1-202ENST00000431547 COX11Q9Y6N1 276 aa12.31□□□□□ -0.44
RFTN1-202ENST00000431547 K7EMI3 77 aa12.3□□□□□ -0.44
RFTN1-202ENST00000431547 REG3AQ06141 175 aa12.3□□□□□ -0.44
RFTN1-202ENST00000431547 SMAGPQ0VAQ4 97 aa12.3□□□□□ -0.44
RFTN1-202ENST00000431547 TMEM101Q96IK0 257 aa12.3□□□□□ -0.44
RFTN1-202ENST00000431547 IFI27P40305 119 aaPredicted RBP12.29□□□□□ -0.44
RFTN1-202ENST00000431547 CSDC2Q9Y534 153 aaKnown RBP12.29□□□□□ -0.44
RFTN1-202ENST00000431547 DNAH17Q9UFH2 4485 aa12.29□□□□□ -0.44
RFTN1-202ENST00000431547 PSCAO43653 123 aa12.28□□□□□ -0.44
RFTN1-202ENST00000431547 OR5A1Q8NGJ0 315 aa12.28□□□□□ -0.44
RFTN1-202ENST00000431547 TIMM21Q9BVV7 248 aa12.28□□□□□ -0.44
RFTN1-202ENST00000431547 UBE2D4Q9Y2X8 147 aa12.28□□□□□ -0.44
RFTN1-202ENST00000431547 IGKV2D-24A0A075B6R9 120 aa12.27□□□□□ -0.45
RFTN1-202ENST00000431547 A0A1B0GVY2 172 aa12.27□□□□□ -0.45
RFTN1-202ENST00000431547 ORMDL2Q53FV1 153 aa12.27□□□□□ -0.45
RFTN1-202ENST00000431547 DGAT2L7PQ6IED9 249 aa12.27□□□□□ -0.45
RFTN1-202ENST00000431547 CLPSL2Q6UWE3 100 aa12.27□□□□□ -0.45
RFTN1-202ENST00000431547 PRSS3P2Q8NHM4 247 aa12.27□□□□□ -0.45
RFTN1-202ENST00000431547 C1orf43Q9BWL3 253 aa12.27□□□□□ -0.45
RFTN1-202ENST00000431547 CDC42SE2Q9NRR3 84 aa12.27□□□□□ -0.45
RFTN1-202ENST00000431547 TRAV8-4A0A0B4J246 113 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms