RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 IFT172Q9UG01 1749 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 KDM3BQ7LBC6 1761 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 TRAV13-2A0A0B4J235 113 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 PPP1R17O96001 155 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 TPPP2P59282 170 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 ARPC4P59998 168 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 DPH3Q96FX2 82 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 SNRNP25Q9BV90 132 aaKnown RBP-0.13□□□□□ -2.43
CDC40-204ENST00000431461 RERGLQ9H628 205 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 CASKIN1Q8WXD9 1431 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 DOPEY2Q9Y3R5 2298 aa-0.13□□□□□ -2.43
CDC40-204ENST00000431461 MYH9P35579 1960 aaKnown RBP-0.14□□□□□ -2.43
CDC40-204ENST00000431461 CFTRP13569 1480 aa-0.14□□□□□ -2.43
CDC40-204ENST00000431461 MACF1Q9UPN3 7388 aaKnown RBP-0.14□□□□□ -2.43
CDC40-204ENST00000431461 M0R129 80 aa-0.14□□□□□ -2.43
CDC40-204ENST00000431461 APOC3P02656 99 aa-0.14□□□□□ -2.43
CDC40-204ENST00000431461 SPAG11BQ08648 103 aa-0.14□□□□□ -2.43
CDC40-204ENST00000431461 SPAG11AQ6PDA7 123 aa-0.14□□□□□ -2.43
CDC40-204ENST00000431461 NAA60Q9H7X0 242 aa-0.14□□□□□ -2.43
CDC40-204ENST00000431461 FAM208BQ5VWN6 2430 aa-0.14□□□□□ -2.43
CDC40-204ENST00000431461 PPIP5K1Q6PFW1 1433 aa-0.14□□□□□ -2.43
CDC40-204ENST00000431461 WNK2Q9Y3S1 2297 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 LOC285095A0A1B0GVY8 99 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 HCG22E2RYF7 251 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 M0R135 149 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 UQCR11O14957 56 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 BTG2P78543 158 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 PIGYQ3MUY2 71 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 S100A7L2Q5SY68 101 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 C10orf128Q5T292 105 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 PPP3R2Q96LZ3 170 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 AMELXQ99217 191 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 PDCD10Q9BUL8 212 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 AGPAT4-IT1Q9H0P7 198 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 TP53AIP1Q9HCN2 124 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 SERP1Q9Y6X1 66 aa-0.15□□□□□ -2.43
CDC40-204ENST00000431461 SHANK2Q9UPX8 1470 aa-0.16□□□□□ -2.43
CDC40-204ENST00000431461 PTPN13Q12923 2485 aa-0.16□□□□□ -2.43
CDC40-204ENST00000431461 CTXND1A0A1B0GTU2 59 aa-0.16□□□□□ -2.44
CDC40-204ENST00000431461 Q6AWC8 147 aa-0.16□□□□□ -2.44
CDC40-204ENST00000431461 C1orf54Q8WWF1 131 aa-0.16□□□□□ -2.44
CDC40-204ENST00000431461 ARL11Q969Q4 196 aa-0.16□□□□□ -2.44
CDC40-204ENST00000431461 V9GYH0 126 aa-0.16□□□□□ -2.44
CDC40-204ENST00000431461 UBR5O95071 2799 aaPredicted RBP-0.16□□□□□ -2.44
CDC40-204ENST00000431461 SPTBN2O15020 2390 aa-0.16□□□□□ -2.44
CDC40-204ENST00000431461 MYH8P13535 1937 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 SPEF2Q9C093 1822 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 S100A12P80511 92 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 HAMPP81172 84 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 CCDC58Q4VC31 144 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 TMEM170BQ5T4T1 132 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 ERCC6L2Q5T890 1561 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 C8orf59Q8N0T1 100 aaPredicted RBP-0.17□□□□□ -2.44
CDC40-204ENST00000431461 TTC9CQ8N5M4 171 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 MGST2Q99735 147 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 MRC1P22897 1456 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 PKDREJQ9NTG1 2253 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 PLXNB2O15031 1838 aa-0.17□□□□□ -2.44
CDC40-204ENST00000431461 PPRC1Q5VV67 1664 aaKnown RBP-0.18□□□□□ -2.44
CDC40-204ENST00000431461 PRDM2Q13029 1718 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 CHD9Q3L8U1 2897 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 FLNCQ14315 2725 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 LOC105371267A0A1B0GV96 52 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 FAM25AB3EWG3 89 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 FAM25CB3EWG5 89 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 FAM25GB3EWG6 89 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 SSSCA1O60232 199 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 FGF7P21781 194 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 SPRR2DP22532 72 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 SPRR1AP35321 89 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 Q56UQ5 140 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 BAGE2Q86Y30 109 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 SPANXDQ9BXN6 97 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 DYNLRB1Q9NP97 96 aa-0.18□□□□□ -2.44
CDC40-204ENST00000431461 NSD1Q96L73 2696 aaPredicted RBP-0.18□□□□□ -2.44
CDC40-204ENST00000431461 ANK2Q01484 3957 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 CELSR1Q9NYQ6 3014 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 TRBV6-1A0A0K0K1D8 114 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 F8VRH5 84 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 IFNGP01579 166 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 APOC2P02655 101 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 HIST1H1DP16402 221 aaKnown RBP-0.19□□□□□ -2.44
CDC40-204ENST00000431461 WHAMMP3Q1A5X7 153 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 Q8N8P6 123 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 LINC00470Q9BZP3 86 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 CACNA1AO00555 2505 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 PI4KAP42356 2102 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 NCOR1O75376 2440 aa-0.19□□□□□ -2.44
CDC40-204ENST00000431461 DOCK2Q92608 1830 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 LRP6O75581 1613 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 C10orf71Q711Q0 1435 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 AKAP6Q13023 2319 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 BCL9LQ86UU0 1499 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 BCE1O60756 84 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 RBM3P98179 157 aaKnown RBP-0.2□□□□□ -2.44
CDC40-204ENST00000431461 KRTAP6-1Q3LI64 71 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 SBF2Q86WG5 1849 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 PATJQ8NI35 1801 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 RAPGEF6Q8TEU7 1601 aa-0.2□□□□□ -2.44
CDC40-204ENST00000431461 C2CD3Q4AC94 2353 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms