RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 A0A087WYN8 130 aa8.85□□□□□ -0.99
SEC13-211ENST00000431352 A0A1B0GUV1 79 aa8.85□□□□□ -0.99
SEC13-211ENST00000431352 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
SEC13-211ENST00000431352 CIRBPQ14011 172 aaKnown RBP8.85□□□□□ -0.99
SEC13-211ENST00000431352 COTL1Q14019 142 aa8.85□□□□□ -0.99
SEC13-211ENST00000431352 NIT2Q9NQR4 276 aa8.85□□□□□ -0.99
SEC13-211ENST00000431352 MED9Q9NWA0 146 aa8.85□□□□□ -0.99
SEC13-211ENST00000431352 TRBV20OR9-2A0A075B6H5 130 aa8.84□□□□□ -0.99
SEC13-211ENST00000431352 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
SEC13-211ENST00000431352 F2Z2F3 143 aa8.84□□□□□ -0.99
SEC13-211ENST00000431352 NTF3P20783 257 aa8.84□□□□□ -0.99
SEC13-211ENST00000431352 MEF2BQ02080 365 aaPredicted RBP8.84□□□□□ -0.99
SEC13-211ENST00000431352 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
SEC13-211ENST00000431352 SPACA4Q8TDM5 124 aa8.84□□□□□ -0.99
SEC13-211ENST00000431352 PGLYRP4Q96LB8 373 aa8.84□□□□□ -0.99
SEC13-211ENST00000431352 TRAV1-1A0A0B4J248 108 aa8.83□□□□□ -1
SEC13-211ENST00000431352 TEX46H3BTG2 121 aa8.83□□□□□ -1
SEC13-211ENST00000431352 MT1HL1P0DM35 61 aa8.83□□□□□ -1
SEC13-211ENST00000431352 CTRLP40313 264 aa8.83□□□□□ -1
SEC13-211ENST00000431352 TWIST1Q15672 202 aa8.83□□□□□ -1
SEC13-211ENST00000431352 C15orf56Q8N910 161 aa8.83□□□□□ -1
SEC13-211ENST00000431352 SMIM12Q96EX1 92 aa8.83□□□□□ -1
SEC13-211ENST00000431352 PHOX2AO14813 284 aa8.82□□□□□ -1
SEC13-211ENST00000431352 PDE6DO43924 150 aa8.82□□□□□ -1
SEC13-211ENST00000431352 AMMECR1LQ6DCA0 310 aa8.82□□□□□ -1
SEC13-211ENST00000431352 Q6ZRU5 148 aa8.82□□□□□ -1
SEC13-211ENST00000431352 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.81□□□□□ -1
SEC13-211ENST00000431352 IGKV2-24A0A0C4DH68 120 aa8.81□□□□□ -1
SEC13-211ENST00000431352 IGKV2-29A2NJV5 120 aaPredicted RBP8.81□□□□□ -1
SEC13-211ENST00000431352 BCL2P10415 239 aa8.81□□□□□ -1
SEC13-211ENST00000431352 COX6A2Q02221 97 aa8.81□□□□□ -1
SEC13-211ENST00000431352 EIF5AL1Q6IS14 154 aaKnown RBP8.81□□□□□ -1
SEC13-211ENST00000431352 RNASEKQ6P5S7 137 aaKnown RBP8.81□□□□□ -1
SEC13-211ENST00000431352 Q6ZNX1 250 aa8.81□□□□□ -1
SEC13-211ENST00000431352 GATD1Q8NB37 220 aa8.81□□□□□ -1
SEC13-211ENST00000431352 NUDT10Q8NFP7 164 aa8.81□□□□□ -1
SEC13-211ENST00000431352 RPL39LQ96EH5 51 aaKnown RBP8.81□□□□□ -1
SEC13-211ENST00000431352 NUDT11Q96G61 164 aa8.81□□□□□ -1
SEC13-211ENST00000431352 RNF185Q96GF1 192 aa8.81□□□□□ -1
SEC13-211ENST00000431352 BIN3Q9NQY0 253 aa8.81□□□□□ -1
SEC13-211ENST00000431352 MAJINQ3KP22 176 aa8.8□□□□□ -1
SEC13-211ENST00000431352 CFAP161Q6P656 301 aa8.8□□□□□ -1
SEC13-211ENST00000431352 C9orf62Q8N4C0 152 aa8.8□□□□□ -1
SEC13-211ENST00000431352 C7orf33Q8WU49 177 aa8.8□□□□□ -1
SEC13-211ENST00000431352 RNASE7Q9H1E1 156 aaKnown RBP8.8□□□□□ -1
SEC13-211ENST00000431352 RPP21Q9H633 154 aaKnown RBP8.8□□□□□ -1
SEC13-211ENST00000431352 RPS10P46783 165 aaKnown RBP8.79□□□□□ -1
SEC13-211ENST00000431352 GTSF1Q8WW33 167 aa8.79□□□□□ -1
SEC13-211ENST00000431352 CHCHD10Q8WYQ3 142 aaPredicted RBP8.79□□□□□ -1
SEC13-211ENST00000431352 PLAC8Q9NZF1 115 aa8.79□□□□□ -1
SEC13-211ENST00000431352 APCSP02743 223 aa8.78□□□□□ -1
SEC13-211ENST00000431352 FOXA3P55318 350 aaPredicted RBP8.78□□□□□ -1
SEC13-211ENST00000431352 PRSS3P2Q8NHM4 247 aa8.78□□□□□ -1
SEC13-211ENST00000431352 LYPD6BQ8NI32 183 aa8.78□□□□□ -1
SEC13-211ENST00000431352 K7EN84 100 aa8.77□□□□□ -1.01
SEC13-211ENST00000431352 NDUFS6O75380 124 aaKnown RBP8.77□□□□□ -1.01
SEC13-211ENST00000431352 FGF6P10767 208 aa8.77□□□□□ -1.01
SEC13-211ENST00000431352 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
SEC13-211ENST00000431352 CNFNQ9BYD5 112 aa8.77□□□□□ -1.01
SEC13-211ENST00000431352 XCL1P47992 114 aa8.76□□□□□ -1.01
SEC13-211ENST00000431352 STPG4Q8N801 248 aa8.76□□□□□ -1.01
SEC13-211ENST00000431352 A0A096LNI7 61 aa8.75□□□□□ -1.01
SEC13-211ENST00000431352 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
SEC13-211ENST00000431352 SDHAF1A6NFY7 115 aa8.75□□□□□ -1.01
SEC13-211ENST00000431352 NCR2O95944 276 aa8.75□□□□□ -1.01
SEC13-211ENST00000431352 PRR3P79522 188 aaKnown RBP8.75□□□□□ -1.01
SEC13-211ENST00000431352 OCC1Q8TAD7 63 aa8.75□□□□□ -1.01
SEC13-211ENST00000431352 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
SEC13-211ENST00000431352 FOXI1Q12951 378 aa8.74□□□□□ -1.01
SEC13-211ENST00000431352 LINC00526Q96FQ7 95 aa8.74□□□□□ -1.01
SEC13-211ENST00000431352 PMCHP20382 165 aa8.73□□□□□ -1.01
SEC13-211ENST00000431352 ODF1Q14990 250 aa8.73□□□□□ -1.01
SEC13-211ENST00000431352 BTF3L4Q96K17 158 aa8.73□□□□□ -1.01
SEC13-211ENST00000431352 TMEM242Q9NWH2 141 aa8.73□□□□□ -1.01
SEC13-211ENST00000431352 H7C423 109 aa8.72□□□□□ -1.01
SEC13-211ENST00000431352 CCL25O15444 150 aa8.72□□□□□ -1.01
SEC13-211ENST00000431352 GATCO43716 136 aaKnown RBP8.72□□□□□ -1.01
SEC13-211ENST00000431352 GAS8-AS1O95177 125 aa8.72□□□□□ -1.01
SEC13-211ENST00000431352 TAGLN2P37802 199 aaKnown RBP8.72□□□□□ -1.01
SEC13-211ENST00000431352 CEBPGP53567 150 aa8.72□□□□□ -1.01
SEC13-211ENST00000431352 SLC51BQ86UW2 128 aa8.72□□□□□ -1.01
SEC13-211ENST00000431352 OR5A1Q8NGJ0 315 aa8.72□□□□□ -1.01
SEC13-211ENST00000431352 TMEM101Q96IK0 257 aa8.72□□□□□ -1.01
SEC13-211ENST00000431352 I3L3M4 83 aa8.71□□□□□ -1.02
SEC13-211ENST00000431352 ZNF25P17030 456 aaPredicted RBP8.71□□□□□ -1.02
SEC13-211ENST00000431352 TEX261Q6UWH6 196 aa8.71□□□□□ -1.02
SEC13-211ENST00000431352 CARD19Q96LW7 228 aa8.71□□□□□ -1.02
SEC13-211ENST00000431352 LINC00959A0A1B0GUT2 108 aa8.7□□□□□ -1.02
SEC13-211ENST00000431352 FAM231BA6NCW3 169 aa8.7□□□□□ -1.02
SEC13-211ENST00000431352 TSHBP01222 138 aa8.7□□□□□ -1.02
SEC13-211ENST00000431352 BORCS7Q96B45 105 aa8.7□□□□□ -1.02
SEC13-211ENST00000431352 MRAP2Q96G30 205 aa8.7□□□□□ -1.02
SEC13-211ENST00000431352 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
SEC13-211ENST00000431352 TCTE3Q8IZS6 198 aa8.69□□□□□ -1.02
SEC13-211ENST00000431352 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
SEC13-211ENST00000431352 TRBV6-5A0A0K0K1A5 114 aa8.68□□□□□ -1.02
SEC13-211ENST00000431352 A8MWL6 223 aa8.68□□□□□ -1.02
SEC13-211ENST00000431352 SS18Q15532 418 aa8.68□□□□□ -1.02
SEC13-211ENST00000431352 LINC01600Q96MT4 127 aa8.68□□□□□ -1.02
SEC13-211ENST00000431352 ZNF561-AS1K7EIQ3 104 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms