RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 VCYO14598 125 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 Q0VG73 95 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 MRPL23Q16540 153 aaKnown RBP11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 HIST1H2BMQ99879 126 aa11.44□□□□□ -0.58
TTC28-202ENST00000431039 TRBV27A0A0K0K1C4 114 aa11.43□□□□□ -0.58
TTC28-202ENST00000431039 RAB5BP61020 215 aa11.43□□□□□ -0.58
TTC28-202ENST00000431039 SH2D6Q7Z4S9 175 aa11.43□□□□□ -0.58
TTC28-202ENST00000431039 DAZ4Q86SG3 579 aaKnown RBP11.43□□□□□ -0.58
TTC28-202ENST00000431039 SMIM2Q9BVW6 85 aa11.43□□□□□ -0.58
TTC28-202ENST00000431039 DAZ3Q9NR90 486 aaKnown RBP11.43□□□□□ -0.58
TTC28-202ENST00000431039 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
TTC28-202ENST00000431039 LRP1BQ9NZR2 4599 aa11.42□□□□□ -0.58
TTC28-202ENST00000431039 LOC389332A0A1B0GUA5 103 aa11.42□□□□□ -0.58
TTC28-202ENST00000431039 IQCJQ1A5X6 159 aa11.42□□□□□ -0.58
TTC28-202ENST00000431039 Q8N8P6 123 aa11.42□□□□□ -0.58
TTC28-202ENST00000431039 NXT2Q9NPJ8 142 aaKnown RBP11.42□□□□□ -0.58
TTC28-202ENST00000431039 A0A096LPF7 62 aa11.41□□□□□ -0.58
TTC28-202ENST00000431039 I3L3M4 83 aa11.41□□□□□ -0.58
TTC28-202ENST00000431039 PMCHP20382 165 aa11.41□□□□□ -0.58
TTC28-202ENST00000431039 C15orf53Q8NAA6 179 aa11.41□□□□□ -0.58
TTC28-202ENST00000431039 ATP6V0E2Q8NHE4 81 aa11.41□□□□□ -0.58
TTC28-202ENST00000431039 PRSS3P2Q8NHM4 247 aa11.41□□□□□ -0.58
TTC28-202ENST00000431039 KRTAP4-5Q9BYR2 181 aa11.41□□□□□ -0.58
TTC28-202ENST00000431039 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.58
TTC28-202ENST00000431039 C1orf134Q5TEV5 83 aa11.4□□□□□ -0.58
TTC28-202ENST00000431039 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
TTC28-202ENST00000431039 K7EMI3 77 aa11.39□□□□□ -0.59
TTC28-202ENST00000431039 TCAPO15273 167 aa11.39□□□□□ -0.59
TTC28-202ENST00000431039 NEGR1Q7Z3B1 354 aa11.39□□□□□ -0.59
TTC28-202ENST00000431039 NIT1Q86X76 327 aa11.39□□□□□ -0.59
TTC28-202ENST00000431039 BAGE3Q86Y29 109 aa11.39□□□□□ -0.59
TTC28-202ENST00000431039 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
TTC28-202ENST00000431039 IGHV3-38A0A0C4DH36 116 aa11.38□□□□□ -0.59
TTC28-202ENST00000431039 LINC00614P0C842 121 aa11.38□□□□□ -0.59
TTC28-202ENST00000431039 TMEM97Q5BJF2 176 aa11.38□□□□□ -0.59
TTC28-202ENST00000431039 COA6Q5JTJ3 125 aaKnown RBP11.38□□□□□ -0.59
TTC28-202ENST00000431039 FA2HQ7L5A8 372 aa11.38□□□□□ -0.59
TTC28-202ENST00000431039 NUDT3O95989 172 aa11.37□□□□□ -0.59
TTC28-202ENST00000431039 TSHBP01222 138 aa11.37□□□□□ -0.59
TTC28-202ENST00000431039 TIRAPP58753 221 aa11.37□□□□□ -0.59
TTC28-202ENST00000431039 COTL1Q14019 142 aa11.37□□□□□ -0.59
TTC28-202ENST00000431039 CHCHD1Q96BP2 118 aaKnown RBP11.37□□□□□ -0.59
TTC28-202ENST00000431039 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
TTC28-202ENST00000431039 GTSF1LQ9H1H1 148 aa11.37□□□□□ -0.59
TTC28-202ENST00000431039 APOBP04114 4563 aaKnown RBP11.36□□□□□ -0.59
TTC28-202ENST00000431039 FCER1GP30273 86 aa11.35□□□□□ -0.59
TTC28-202ENST00000431039 NDUFA6P56556 154 aa11.35□□□□□ -0.59
TTC28-202ENST00000431039 TNP2Q05952 138 aa11.35□□□□□ -0.59
TTC28-202ENST00000431039 AP5S1Q9NUS5 200 aa11.35□□□□□ -0.59
TTC28-202ENST00000431039 SERF1AO75920 110 aa11.34□□□□□ -0.59
TTC28-202ENST00000431039 LINC00310P59036 64 aa11.34□□□□□ -0.59
TTC28-202ENST00000431039 LAGE3Q14657 143 aa11.34□□□□□ -0.59
TTC28-202ENST00000431039 ORMDL2Q53FV1 153 aa11.34□□□□□ -0.59
TTC28-202ENST00000431039 RNASEKQ6P5S7 137 aaKnown RBP11.34□□□□□ -0.59
TTC28-202ENST00000431039 LYPD5Q6UWN5 251 aa11.34□□□□□ -0.59
TTC28-202ENST00000431039 NTM-AS1Q6ZSK4 140 aa11.34□□□□□ -0.59
TTC28-202ENST00000431039 TRBV6-8A0A0A6YYG3 113 aa11.33□□□□□ -0.6
TTC28-202ENST00000431039 C16orf90A8MZG2 172 aa11.33□□□□□ -0.6
TTC28-202ENST00000431039 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
TTC28-202ENST00000431039 ESDP10768 282 aa11.32□□□□□ -0.6
TTC28-202ENST00000431039 AMTP48728 403 aa11.32□□□□□ -0.6
TTC28-202ENST00000431039 LELP1Q5T871 98 aa11.32□□□□□ -0.6
TTC28-202ENST00000431039 DEFB104AQ8WTQ1 72 aa11.32□□□□□ -0.6
TTC28-202ENST00000431039 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
TTC28-202ENST00000431039 TRBV25-1A0A075B6N4 114 aa11.31□□□□□ -0.6
TTC28-202ENST00000431039 NBDYA0A0U1RRE5 68 aa11.31□□□□□ -0.6
TTC28-202ENST00000431039 NUPR1O60356 82 aa11.31□□□□□ -0.6
TTC28-202ENST00000431039 S100A6P06703 90 aa11.31□□□□□ -0.6
TTC28-202ENST00000431039 G0S2P27469 103 aa11.31□□□□□ -0.6
TTC28-202ENST00000431039 CHCHD7Q9BUK0 85 aa11.31□□□□□ -0.6
TTC28-202ENST00000431039 HSBP1O75506 76 aa11.3□□□□□ -0.6
TTC28-202ENST00000431039 ESRGQ1W209 222 aa11.3□□□□□ -0.6
TTC28-202ENST00000431039 C6orf223Q8N319 242 aa11.3□□□□□ -0.6
TTC28-202ENST00000431039 TMEM243Q9BU79 118 aa11.3□□□□□ -0.6
TTC28-202ENST00000431039 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
TTC28-202ENST00000431039 TMA7Q9Y2S6 64 aaKnown RBP11.29□□□□□ -0.6
TTC28-202ENST00000431039 LINC01549A6NIU2 74 aa11.28□□□□□ -0.6
TTC28-202ENST00000431039 H7C423 109 aa11.28□□□□□ -0.6
TTC28-202ENST00000431039 MAPKAPK5-AS1Q8N8E1 139 aa11.28□□□□□ -0.6
TTC28-202ENST00000431039 TMEM18Q96B42 140 aa11.28□□□□□ -0.6
TTC28-202ENST00000431039 A0A096LNJ9 63 aa11.27□□□□□ -0.61
TTC28-202ENST00000431039 HBDP02042 147 aa11.27□□□□□ -0.61
TTC28-202ENST00000431039 CCL18P55774 89 aa11.27□□□□□ -0.61
TTC28-202ENST00000431039 CYSLTR1Q9Y271 337 aa11.27□□□□□ -0.61
TTC28-202ENST00000431039 LINC00588Q9Y4M8 146 aa11.27□□□□□ -0.61
TTC28-202ENST00000431039 TRAV8-6A0A0B4J262 113 aa11.26□□□□□ -0.61
TTC28-202ENST00000431039 C5orf52A6NGY3 159 aa11.26□□□□□ -0.61
TTC28-202ENST00000431039 CDK2AP2O75956 126 aa11.26□□□□□ -0.61
TTC28-202ENST00000431039 BTF3P20290 206 aaKnown RBP11.26□□□□□ -0.61
TTC28-202ENST00000431039 C2orf66Q6UXQ4 117 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms