RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 MIAQ16674 131 aa6.48□□□□□ -1.37
HDAC6-207ENST00000430858 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
HDAC6-207ENST00000430858 Q8N1X5 172 aa6.48□□□□□ -1.37
HDAC6-207ENST00000430858 TMEM191AQ9H0A3 160 aa6.48□□□□□ -1.37
HDAC6-207ENST00000430858 DNAH5Q8TE73 4624 aa6.48□□□□□ -1.37
HDAC6-207ENST00000430858 HSPG2P98160 4391 aa6.48□□□□□ -1.37
HDAC6-207ENST00000430858 UBE2L6O14933 153 aa6.47□□□□□ -1.37
HDAC6-207ENST00000430858 NCR2O95944 276 aa6.47□□□□□ -1.37
HDAC6-207ENST00000430858 AMTP48728 403 aa6.47□□□□□ -1.37
HDAC6-207ENST00000430858 XGP55808 180 aa6.47□□□□□ -1.37
HDAC6-207ENST00000430858 LINC00269Q8N2A0 174 aa6.47□□□□□ -1.37
HDAC6-207ENST00000430858 NUP35Q8NFH5 326 aa6.47□□□□□ -1.37
HDAC6-207ENST00000430858 RPL39LQ96EH5 51 aaKnown RBP6.47□□□□□ -1.37
HDAC6-207ENST00000430858 TMEM70Q9BUB7 260 aa6.47□□□□□ -1.37
HDAC6-207ENST00000430858 NAT8BQ9UHF3 227 aa6.47□□□□□ -1.37
HDAC6-207ENST00000430858 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-207ENST00000430858 TRBV6-5A0A0K0K1A5 114 aa6.46□□□□□ -1.38
HDAC6-207ENST00000430858 SDHAF1A6NFY7 115 aa6.46□□□□□ -1.38
HDAC6-207ENST00000430858 RAB14P61106 215 aa6.46□□□□□ -1.38
HDAC6-207ENST00000430858 REG3AQ06141 175 aa6.46□□□□□ -1.38
HDAC6-207ENST00000430858 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
HDAC6-207ENST00000430858 C20orf203Q8NBC4 194 aa6.46□□□□□ -1.38
HDAC6-207ENST00000430858 DEFB104AQ8WTQ1 72 aa6.46□□□□□ -1.38
HDAC6-207ENST00000430858 MRAP2Q96G30 205 aa6.46□□□□□ -1.38
HDAC6-207ENST00000430858 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
HDAC6-207ENST00000430858 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
HDAC6-207ENST00000430858 IGLV4-60A0A075B6I1 120 aa6.45□□□□□ -1.38
HDAC6-207ENST00000430858 TRAV8-4A0A0B4J246 113 aa6.45□□□□□ -1.38
HDAC6-207ENST00000430858 SMIM27A0A1W2PRY6 76 aa6.45□□□□□ -1.38
HDAC6-207ENST00000430858 H7C423 109 aa6.45□□□□□ -1.38
HDAC6-207ENST00000430858 RAB4AP20338 218 aa6.45□□□□□ -1.38
HDAC6-207ENST00000430858 CLPSL2Q6UWE3 100 aa6.45□□□□□ -1.38
HDAC6-207ENST00000430858 AMN1Q8IY45 258 aa6.45□□□□□ -1.38
HDAC6-207ENST00000430858 RNF185Q96GF1 192 aa6.45□□□□□ -1.38
HDAC6-207ENST00000430858 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
HDAC6-207ENST00000430858 A0A1B0GW15 77 aa6.44□□□□□ -1.38
HDAC6-207ENST00000430858 I3L3M4 83 aa6.44□□□□□ -1.38
HDAC6-207ENST00000430858 PPP1R17O96001 155 aa6.44□□□□□ -1.38
HDAC6-207ENST00000430858 HLA-DQA1P01909 254 aa6.44□□□□□ -1.38
HDAC6-207ENST00000430858 APCSP02743 223 aa6.44□□□□□ -1.38
HDAC6-207ENST00000430858 PMCHP20382 165 aa6.44□□□□□ -1.38
HDAC6-207ENST00000430858 ST20Q9HBF5 79 aa6.44□□□□□ -1.38
HDAC6-207ENST00000430858 USP17L23D6RBM5 183 aa6.43□□□□□ -1.38
HDAC6-207ENST00000430858 GAS8-AS1O95177 125 aa6.43□□□□□ -1.38
HDAC6-207ENST00000430858 AMMECR1LQ6DCA0 310 aa6.43□□□□□ -1.38
HDAC6-207ENST00000430858 KRTAP26-1Q6PEX3 210 aa6.43□□□□□ -1.38
HDAC6-207ENST00000430858 IGLV10-54A0A075B6I4 117 aa6.42□□□□□ -1.38
HDAC6-207ENST00000430858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-207ENST00000430858 TRBV27A0A0K0K1C4 114 aa6.42□□□□□ -1.38
HDAC6-207ENST00000430858 IGKV2-29A2NJV5 120 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-207ENST00000430858 EPM2AB3EWF7 344 aa6.42□□□□□ -1.38
HDAC6-207ENST00000430858 PPP1R2P9O14990 202 aa6.42□□□□□ -1.38
HDAC6-207ENST00000430858 RPS10P46783 165 aaKnown RBP6.42□□□□□ -1.38
HDAC6-207ENST00000430858 POLR2KP53803 58 aaKnown RBP6.42□□□□□ -1.38
HDAC6-207ENST00000430858 PNRC1Q12796 327 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-207ENST00000430858 FAM104BQ5XKR9 115 aa6.42□□□□□ -1.38
HDAC6-207ENST00000430858 Q6ZSA8 131 aa6.42□□□□□ -1.38
HDAC6-207ENST00000430858 FAM30AQ9NZY2 134 aa6.42□□□□□ -1.38
HDAC6-207ENST00000430858 PCLOQ9Y6V0 5065 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 LINC00862A6NCI5 91 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 VCYO14598 125 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 TSHBP01222 138 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 S100A8P05109 93 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 FGF6P10767 208 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 ESDP10768 282 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 ZNF25P17030 456 aaPredicted RBP6.41□□□□□ -1.38
HDAC6-207ENST00000430858 CAMPP49913 170 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 CLLU1Q5K131 121 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 RNASEKQ6P5S7 137 aaKnown RBP6.41□□□□□ -1.38
HDAC6-207ENST00000430858 TMEM242Q9NWH2 141 aa6.41□□□□□ -1.38
HDAC6-207ENST00000430858 F8W036 122 aa6.4□□□□□ -1.38
HDAC6-207ENST00000430858 SMKR1H3BMG3 65 aa6.4□□□□□ -1.38
HDAC6-207ENST00000430858 SUMO2P61956 95 aaKnown RBP6.4□□□□□ -1.38
HDAC6-207ENST00000430858 HBBP68871 147 aa6.4□□□□□ -1.38
HDAC6-207ENST00000430858 MRPL51Q4U2R6 128 aaKnown RBP6.4□□□□□ -1.38
HDAC6-207ENST00000430858 DGAT2L7PQ6IED9 249 aa6.4□□□□□ -1.38
HDAC6-207ENST00000430858 NRACQ8N912 160 aa6.4□□□□□ -1.38
HDAC6-207ENST00000430858 CLRN3Q8NCR9 226 aa6.4□□□□□ -1.38
HDAC6-207ENST00000430858 TMEM101Q96IK0 257 aa6.4□□□□□ -1.38
HDAC6-207ENST00000430858 BTF3L4Q96K17 158 aa6.4□□□□□ -1.38
HDAC6-207ENST00000430858 A0A1B0GXF2 115 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 C7orf77A4D0Y5 90 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 PRSS1P07477 247 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 FCER1GP30273 86 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 HAMPP81172 84 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 LINC01620Q4KN68 170 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 MRPL54Q6P161 138 aaKnown RBP6.39□□□□□ -1.39
HDAC6-207ENST00000430858 ATP5L2Q7Z4Y8 100 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 ANAPC16Q96DE5 110 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 KIR2DL4Q99706 377 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
HDAC6-207ENST00000430858 TRBV24-1A0A075B6N3 115 aa6.38□□□□□ -1.39
HDAC6-207ENST00000430858 IGKV3OR2-268A0A0C4DH90 116 aa6.38□□□□□ -1.39
HDAC6-207ENST00000430858 FAM229AH3BQW9 127 aa6.38□□□□□ -1.39
HDAC6-207ENST00000430858 SMR3BP02814 79 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-207ENST00000430858 MT-ND4LP03901 98 aa6.38□□□□□ -1.39
HDAC6-207ENST00000430858 CKS2P33552 79 aa6.38□□□□□ -1.39
HDAC6-207ENST00000430858 Q5VSD8 79 aa6.38□□□□□ -1.39
HDAC6-207ENST00000430858 MRPL52Q86TS9 123 aaKnown RBP6.38□□□□□ -1.39
HDAC6-207ENST00000430858 OR5A1Q8NGJ0 315 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms