RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 SMR3BP02814 79 aaPredicted RBP6.01□□□□□ -1.45
HDAC9-211ENST00000430454 CTRLP40313 264 aa6.01□□□□□ -1.45
HDAC9-211ENST00000430454 NKX2-5P52952 324 aaPredicted RBP6.01□□□□□ -1.45
HDAC9-211ENST00000430454 RBX1P62877 108 aa6.01□□□□□ -1.45
HDAC9-211ENST00000430454 GAGE6Q13070 117 aa6.01□□□□□ -1.45
HDAC9-211ENST00000430454 COTL1Q14019 142 aa6.01□□□□□ -1.45
HDAC9-211ENST00000430454 ENHOQ6UWT2 76 aa6.01□□□□□ -1.45
HDAC9-211ENST00000430454 PGLYRP4Q96LB8 373 aa6.01□□□□□ -1.45
HDAC9-211ENST00000430454 VPS13BQ7Z7G8 4022 aa6.01□□□□□ -1.45
HDAC9-211ENST00000430454 A0A1B0GUV1 79 aa6□□□□□ -1.45
HDAC9-211ENST00000430454 GATCO43716 136 aaKnown RBP6□□□□□ -1.45
HDAC9-211ENST00000430454 HLA-DQA1P01909 254 aa6□□□□□ -1.45
HDAC9-211ENST00000430454 WFDC2Q14508 124 aa6□□□□□ -1.45
HDAC9-211ENST00000430454 LINC00269Q8N2A0 174 aa6□□□□□ -1.45
HDAC9-211ENST00000430454 OCC1Q8TAD7 63 aa6□□□□□ -1.45
HDAC9-211ENST00000430454 CNFNQ9BYD5 112 aa6□□□□□ -1.45
HDAC9-211ENST00000430454 PRR34Q9NV39 138 aa6□□□□□ -1.45
HDAC9-211ENST00000430454 TRBV20OR9-2A0A075B6H5 130 aa5.99□□□□□ -1.45
HDAC9-211ENST00000430454 USP17L23D6RBM5 183 aa5.99□□□□□ -1.45
HDAC9-211ENST00000430454 NDUFS6O75380 124 aaKnown RBP5.99□□□□□ -1.45
HDAC9-211ENST00000430454 AMTP48728 403 aa5.99□□□□□ -1.45
HDAC9-211ENST00000430454 REG3AQ06141 175 aa5.99□□□□□ -1.45
HDAC9-211ENST00000430454 Q6ZSA8 131 aa5.99□□□□□ -1.45
HDAC9-211ENST00000430454 NTM-AS1Q6ZSK4 140 aa5.99□□□□□ -1.45
HDAC9-211ENST00000430454 FAM231DQ6ZW35 169 aa5.99□□□□□ -1.45
HDAC9-211ENST00000430454 EIF5A2Q9GZV4 153 aaKnown RBP5.99□□□□□ -1.45
HDAC9-211ENST00000430454 RNASE7Q9H1E1 156 aaKnown RBP5.99□□□□□ -1.45
HDAC9-211ENST00000430454 AP5S1Q9NUS5 200 aa5.99□□□□□ -1.45
HDAC9-211ENST00000430454 FAT1Q14517 4588 aa5.99□□□□□ -1.45
HDAC9-211ENST00000430454 HSBP1L1C9JCN9 74 aa5.98□□□□□ -1.45
HDAC9-211ENST00000430454 H0Y8G0 127 aa5.98□□□□□ -1.45
HDAC9-211ENST00000430454 NCR2O95944 276 aa5.98□□□□□ -1.45
HDAC9-211ENST00000430454 CEBPGP53567 150 aa5.98□□□□□ -1.45
HDAC9-211ENST00000430454 AMMECR1LQ6DCA0 310 aa5.98□□□□□ -1.45
HDAC9-211ENST00000430454 ALKAL2Q6UX46 152 aa5.98□□□□□ -1.45
HDAC9-211ENST00000430454 LINC00528Q8N1L1 170 aa5.98□□□□□ -1.45
HDAC9-211ENST00000430454 CHAC1Q9BUX1 264 aa5.98□□□□□ -1.45
HDAC9-211ENST00000430454 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.97□□□□□ -1.45
HDAC9-211ENST00000430454 F8WDY8 70 aa5.97□□□□□ -1.45
HDAC9-211ENST00000430454 H7C423 109 aa5.97□□□□□ -1.45
HDAC9-211ENST00000430454 DEFB104AQ8WTQ1 72 aa5.97□□□□□ -1.45
HDAC9-211ENST00000430454 SMIM7Q9BQ49 75 aa5.97□□□□□ -1.45
HDAC9-211ENST00000430454 GFRA4Q9GZZ7 299 aa5.97□□□□□ -1.45
HDAC9-211ENST00000430454 FAM30AQ9NZY2 134 aa5.97□□□□□ -1.45
HDAC9-211ENST00000430454 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
HDAC9-211ENST00000430454 FAM231BA6NCW3 169 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 K7EN84 100 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 APCSP02743 223 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 HAMPP81172 84 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 SMAGPQ0VAQ4 97 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 FAM74A3Q4VXF1 159 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 CLPSL2Q6UWE3 100 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 LYPD6BQ8NI32 183 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 BTF3L4Q96K17 158 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 HERC1Q15751 4861 aa5.96□□□□□ -1.46
HDAC9-211ENST00000430454 DMBT1Q9UGM3 2413 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-211ENST00000430454 A0A1B0GUT8 65 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 hDV102S1A0JD36 115 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 ZNF727A8MUV8 499 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 I3L3M4 83 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 J3QL48 77 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 PPP1R17O96001 155 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 PMCHP20382 165 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 FOXA3P55318 350 aaPredicted RBP5.95□□□□□ -1.46
HDAC9-211ENST00000430454 SCXQ7RTU7 201 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 GATD1Q8NB37 220 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 TSKUQ8WUA8 353 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 GTSF1Q8WW33 167 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 TMEM101Q96IK0 257 aa5.95□□□□□ -1.46
HDAC9-211ENST00000430454 IGLV10-54A0A075B6I4 117 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 PRSS1P07477 247 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 ZNF25P17030 456 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-211ENST00000430454 RIGQ13278 110 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 LINC01620Q4KN68 170 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 RNASEKQ6P5S7 137 aaKnown RBP5.94□□□□□ -1.46
HDAC9-211ENST00000430454 C9orf163Q8N9P6 203 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 C20orf203Q8NBC4 194 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 DPH3Q96FX2 82 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 ST20Q9HBF5 79 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 OSTCQ9NRP0 149 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 PKIGQ9Y2B9 76 aa5.94□□□□□ -1.46
HDAC9-211ENST00000430454 IGHV3-64A0A075B6Q5 118 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 TRAV26-2A0A0B4J265 109 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 TRBV6-5A0A0K0K1A5 114 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 SDHAF1A6NFY7 115 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 HIGD1CA8MV81 97 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 CNBPP62633 177 aaKnown RBP5.93□□□□□ -1.46
HDAC9-211ENST00000430454 TMEM241Q24JQ0 296 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 LINC01551Q86U37 167 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 CIRBP-AS1Q8TBR5 109 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 MRAP2Q96G30 205 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 TMEM191AQ9H0A3 160 aa5.93□□□□□ -1.46
HDAC9-211ENST00000430454 IGLV4-60A0A075B6I1 120 aa5.92□□□□□ -1.46
HDAC9-211ENST00000430454 PEA15Q15121 130 aa5.92□□□□□ -1.46
HDAC9-211ENST00000430454 OR5A1Q8NGJ0 315 aa5.92□□□□□ -1.46
HDAC9-211ENST00000430454 RNF185Q96GF1 192 aa5.92□□□□□ -1.46
HDAC9-211ENST00000430454 SMDT1Q9H4I9 107 aa5.92□□□□□ -1.46
HDAC9-211ENST00000430454 MYCBP2O75592 4640 aa5.92□□□□□ -1.46
HDAC9-211ENST00000430454 IGKV3OR2-268A0A0C4DH90 116 aa5.91□□□□□ -1.46
HDAC9-211ENST00000430454 A0A1B0GW15 77 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms