RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 NIT1Q86X76 327 aa8.4□□□□□ -1.06
USP40-205ENST00000430158 YPEL4Q96NS1 127 aa8.4□□□□□ -1.06
USP40-205ENST00000430158 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
USP40-205ENST00000430158 TMEM70Q9BUB7 260 aa8.39□□□□□ -1.07
USP40-205ENST00000430158 TRBV27A0A0K0K1C4 114 aa8.38□□□□□ -1.07
USP40-205ENST00000430158 K7EP13 123 aa8.38□□□□□ -1.07
USP40-205ENST00000430158 TMEM97Q5BJF2 176 aa8.38□□□□□ -1.07
USP40-205ENST00000430158 TTC32Q5I0X7 151 aa8.38□□□□□ -1.07
USP40-205ENST00000430158 KCNIP4Q6PIL6 250 aa8.38□□□□□ -1.07
USP40-205ENST00000430158 URGCP-MRPS24S4R325 110 aa8.38□□□□□ -1.07
USP40-205ENST00000430158 D6R8Y8 96 aa8.37□□□□□ -1.07
USP40-205ENST00000430158 BTF3P20290 206 aaKnown RBP8.37□□□□□ -1.07
USP40-205ENST00000430158 RPL32P62910 135 aaKnown RBP8.37□□□□□ -1.07
USP40-205ENST00000430158 Q6ZRN7 208 aaPredicted RBP8.37□□□□□ -1.07
USP40-205ENST00000430158 DEFB104AQ8WTQ1 72 aa8.37□□□□□ -1.07
USP40-205ENST00000430158 ST20Q9HBF5 79 aa8.37□□□□□ -1.07
USP40-205ENST00000430158 DNAH11Q96DT5 4516 aa8.37□□□□□ -1.07
USP40-205ENST00000430158 TNFRSF6BO95407 300 aa8.36□□□□□ -1.07
USP40-205ENST00000430158 PPP1R17O96001 155 aa8.36□□□□□ -1.07
USP40-205ENST00000430158 TSHBP01222 138 aa8.36□□□□□ -1.07
USP40-205ENST00000430158 NPYP01303 97 aa8.36□□□□□ -1.07
USP40-205ENST00000430158 PPBPP02775 128 aa8.36□□□□□ -1.07
USP40-205ENST00000430158 CKS2P33552 79 aa8.36□□□□□ -1.07
USP40-205ENST00000430158 ELOBQ15370 118 aa8.36□□□□□ -1.07
USP40-205ENST00000430158 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
USP40-205ENST00000430158 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 PRSS47A8MTI9 375 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 IBA57-AS1B1ANH7 110 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 I3L3M4 83 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 PHOX2AO14813 284 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 IGHV3-30P01768 117 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 IGHV3-33P01772 117 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 IGHV3-30-3P0DP02 117 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 IGHV3-30-5P0DP03 117 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 ESDP10768 282 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 S100PP25815 95 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 SUMO2P61956 95 aaKnown RBP8.35□□□□□ -1.07
USP40-205ENST00000430158 COTL1Q14019 142 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 C1orf134Q5TEV5 83 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 C6orf223Q8N319 242 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.35□□□□□ -1.07
USP40-205ENST00000430158 CHCHD7Q9BUK0 85 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 GNB1LQ9BYB4 327 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 HECTD4Q9Y4D8 3996 aa8.35□□□□□ -1.07
USP40-205ENST00000430158 TRBV25-1A0A075B6N4 114 aa8.34□□□□□ -1.07
USP40-205ENST00000430158 VCYO14598 125 aa8.34□□□□□ -1.07
USP40-205ENST00000430158 MPV17L2Q567V2 206 aa8.34□□□□□ -1.07
USP40-205ENST00000430158 ORMDL3Q8N138 153 aa8.34□□□□□ -1.07
USP40-205ENST00000430158 C10orf126Q8N4M7 172 aa8.34□□□□□ -1.07
USP40-205ENST00000430158 PKD1P98161 4303 aa8.34□□□□□ -1.07
USP40-205ENST00000430158 EPPK1P58107 5090 aaKnown RBP8.34□□□□□ -1.08
USP40-205ENST00000430158 TRAV9-2A0A087WT02 112 aa8.33□□□□□ -1.08
USP40-205ENST00000430158 PMCHP20382 165 aa8.33□□□□□ -1.08
USP40-205ENST00000430158 PRELID3AQ96N28 172 aa8.33□□□□□ -1.08
USP40-205ENST00000430158 CHCHD5Q9BSY4 110 aa8.33□□□□□ -1.08
USP40-205ENST00000430158 TMEM243Q9BU79 118 aa8.33□□□□□ -1.08
USP40-205ENST00000430158 KRTAP4-9Q9BYQ8 210 aa8.33□□□□□ -1.08
USP40-205ENST00000430158 A0A1B0GUV1 79 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 HLA-DQA1P01909 254 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 AMTP48728 403 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 RBX1P62877 108 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 GAGE6Q13070 117 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 LAGE3Q14657 143 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 COX19Q49B96 90 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 CBLN2Q8IUK8 224 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 LAMTOR2Q9Y2Q5 125 aa8.32□□□□□ -1.08
USP40-205ENST00000430158 PKHD1P08F94 4074 aa8.31□□□□□ -1.08
USP40-205ENST00000430158 APCSP02743 223 aa8.31□□□□□ -1.08
USP40-205ENST00000430158 KIAA1644Q3SXP7 199 aa8.31□□□□□ -1.08
USP40-205ENST00000430158 Q8N976 141 aa8.31□□□□□ -1.08
USP40-205ENST00000430158 C20orf203Q8NBC4 194 aa8.31□□□□□ -1.08
USP40-205ENST00000430158 IGLV4-60A0A075B6I1 120 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 A0A1B0GVY2 172 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 TMEM262E9PQX1 116 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 H7C423 109 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 PKIAP61925 76 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 LINC00336Q6ZUF6 198 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 SMCO4Q9NRQ5 59 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 PRR34Q9NV39 138 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 KLK12Q9UKR0 248 aa8.3□□□□□ -1.08
USP40-205ENST00000430158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.29□□□□□ -1.08
USP40-205ENST00000430158 A0A087WX48 190 aa8.29□□□□□ -1.08
USP40-205ENST00000430158 IGKV2-29A2NJV5 120 aaPredicted RBP8.29□□□□□ -1.08
USP40-205ENST00000430158 MT-ND6P03923 174 aa8.29□□□□□ -1.08
USP40-205ENST00000430158 ALKBH7Q9BT30 221 aaPredicted RBP8.29□□□□□ -1.08
USP40-205ENST00000430158 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
USP40-205ENST00000430158 MRPL52Q86TS9 123 aaKnown RBP8.28□□□□□ -1.08
USP40-205ENST00000430158 NFE4Q86UQ8 179 aa8.28□□□□□ -1.08
USP40-205ENST00000430158 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
USP40-205ENST00000430158 PRSS29PA6NIE9 313 aa8.27□□□□□ -1.09
USP40-205ENST00000430158 TCAPO15273 167 aa8.27□□□□□ -1.09
USP40-205ENST00000430158 FGF6P10767 208 aa8.27□□□□□ -1.09
USP40-205ENST00000430158 KRTAP26-1Q6PEX3 210 aa8.27□□□□□ -1.09
USP40-205ENST00000430158 MAPKAPK5-AS1Q8N8E1 139 aa8.27□□□□□ -1.09
USP40-205ENST00000430158 Q8N8P6 123 aa8.27□□□□□ -1.09
USP40-205ENST00000430158 KIR2DL4Q99706 377 aa8.27□□□□□ -1.09
USP40-205ENST00000430158 DYNC1H1Q14204 4646 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms