RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	CLPSL2	Q6UWE3	100 aa		11.5	□□□□□ -0.57
MRPL28-203	ENST00000429738	C20orf203	Q8NBC4	194 aa		11.5	□□□□□ -0.57
MRPL28-203	ENST00000429738	OXT	P01178	125 aa		11.49	□□□□□ -0.57
MRPL28-203	ENST00000429738	BLOC1S1	P78537	153 aa		11.49	□□□□□ -0.57
MRPL28-203	ENST00000429738	ALKAL2	Q6UX46	152 aa		11.49	□□□□□ -0.57
MRPL28-203	ENST00000429738	PRSS1	P07477	247 aa		11.48	□□□□□ -0.57
MRPL28-203	ENST00000429738	REG3A	Q06141	175 aa		11.48	□□□□□ -0.57
MRPL28-203	ENST00000429738	TWIST1	Q15672	202 aa		11.48	□□□□□ -0.57
MRPL28-203	ENST00000429738	CIRBP-AS1	Q8TBR5	109 aa		11.48	□□□□□ -0.57
MRPL28-203	ENST00000429738	GTSF1	Q8WW33	167 aa		11.48	□□□□□ -0.57
MRPL28-203	ENST00000429738	TMEM243	Q9BU79	118 aa		11.48	□□□□□ -0.57
MRPL28-203	ENST00000429738	IGLV4-60	A0A075B6I1	120 aa		11.47	□□□□□ -0.57
MRPL28-203	ENST00000429738	GATD1	Q8NB37	220 aa		11.47	□□□□□ -0.57
MRPL28-203	ENST00000429738	PLA2G2D	Q9UNK4	145 aa		11.47	□□□□□ -0.57
MRPL28-203	ENST00000429738	KRTAP10-4	P60372	401 aa	Predicted RBP	11.46	□□□□□ -0.57
MRPL28-203	ENST00000429738	DGAT2L7P	Q6IED9	249 aa		11.46	□□□□□ -0.57
MRPL28-203	ENST00000429738	FAM231D	Q6ZW35	169 aa		11.46	□□□□□ -0.57
MRPL28-203	ENST00000429738	GFRA4	Q9GZZ7	299 aa		11.46	□□□□□ -0.57
MRPL28-203	ENST00000429738	TRAV8-4	A0A0B4J246	113 aa		11.45	□□□□□ -0.58
MRPL28-203	ENST00000429738	C9orf163	Q8N9P6	203 aa		11.45	□□□□□ -0.58
MRPL28-203	ENST00000429738	TRAV26-2	A0A0B4J265	109 aa		11.44	□□□□□ -0.58
MRPL28-203	ENST00000429738	COTL1	Q14019	142 aa		11.44	□□□□□ -0.58
MRPL28-203	ENST00000429738	IGLV10-54	A0A075B6I4	117 aa		11.43	□□□□□ -0.58
MRPL28-203	ENST00000429738	GATC	O43716	136 aa	Known RBP	11.43	□□□□□ -0.58
MRPL28-203	ENST00000429738	NDUFS6	O75380	124 aa	Known RBP	11.43	□□□□□ -0.58
MRPL28-203	ENST00000429738	AMT	P48728	403 aa		11.43	□□□□□ -0.58
MRPL28-203	ENST00000429738	FOXA3	P55318	350 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL28-203	ENST00000429738	CLRN3	Q8NCR9	226 aa		11.43	□□□□□ -0.58
MRPL28-203	ENST00000429738	CT83	Q5H943	113 aa		11.42	□□□□□ -0.58
MRPL28-203	ENST00000429738	PKHD1L1	Q86WI1	4243 aa		11.41	□□□□□ -0.58
MRPL28-203	ENST00000429738		A8MWL6	223 aa		11.41	□□□□□ -0.58
MRPL28-203	ENST00000429738	UBE2L6	O14933	153 aa		11.41	□□□□□ -0.58
MRPL28-203	ENST00000429738	RPL39L	Q96EH5	51 aa	Known RBP	11.41	□□□□□ -0.58
MRPL28-203	ENST00000429738	CNBP	P62633	177 aa	Known RBP	11.4	□□□□□ -0.58
MRPL28-203	ENST00000429738	TEX261	Q6UWH6	196 aa		11.4	□□□□□ -0.58
MRPL28-203	ENST00000429738	SMIM15	Q7Z3B0	74 aa		11.4	□□□□□ -0.58
MRPL28-203	ENST00000429738	NCR2	O95944	276 aa		11.39	□□□□□ -0.59
MRPL28-203	ENST00000429738	SDIM1	Q6ZPB5	146 aa		11.39	□□□□□ -0.59
MRPL28-203	ENST00000429738	LINC01551	Q86U37	167 aa		11.39	□□□□□ -0.59
MRPL28-203	ENST00000429738	CEBPG	P53567	150 aa		11.38	□□□□□ -0.59
MRPL28-203	ENST00000429738	FAM210A	Q96ND0	272 aa		11.38	□□□□□ -0.59
MRPL28-203	ENST00000429738	SMIM7	Q9BQ49	75 aa		11.38	□□□□□ -0.59
MRPL28-203	ENST00000429738	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.38	□□□□□ -0.59
MRPL28-203	ENST00000429738	TRBV6-5	A0A0K0K1A5	114 aa		11.37	□□□□□ -0.59
MRPL28-203	ENST00000429738	SDHAF1	A6NFY7	115 aa		11.37	□□□□□ -0.59
MRPL28-203	ENST00000429738	EIF5A2	Q9GZV4	153 aa	Known RBP	11.37	□□□□□ -0.59
MRPL28-203	ENST00000429738	hDV102S1	A0JD36	115 aa		11.36	□□□□□ -0.59
MRPL28-203	ENST00000429738		H7C423	109 aa		11.36	□□□□□ -0.59
MRPL28-203	ENST00000429738	PANO1	I0J062	215 aa		11.36	□□□□□ -0.59
MRPL28-203	ENST00000429738	SLPI	P03973	132 aa		11.36	□□□□□ -0.59
MRPL28-203	ENST00000429738	SRP19	P09132	144 aa	Known RBP	11.36	□□□□□ -0.59
MRPL28-203	ENST00000429738	TSKU	Q8WUA8	353 aa		11.36	□□□□□ -0.59
MRPL28-203	ENST00000429738	FAM231B	A6NCW3	169 aa		11.35	□□□□□ -0.59
MRPL28-203	ENST00000429738	HIGD1C	A8MV81	97 aa		11.35	□□□□□ -0.59
MRPL28-203	ENST00000429738	APCS	P02743	223 aa		11.35	□□□□□ -0.59
MRPL28-203	ENST00000429738	CIRBP	Q14011	172 aa	Known RBP	11.35	□□□□□ -0.59
MRPL28-203	ENST00000429738	OSTC	Q9NRP0	149 aa		11.35	□□□□□ -0.59
MRPL28-203	ENST00000429738	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.34	□□□□□ -0.59
MRPL28-203	ENST00000429738	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.34	□□□□□ -0.59
MRPL28-203	ENST00000429738	ZNF727	A8MUV8	499 aa		11.34	□□□□□ -0.59
MRPL28-203	ENST00000429738	GAS8-AS1	O95177	125 aa		11.34	□□□□□ -0.59
MRPL28-203	ENST00000429738	C15orf56	Q8N910	161 aa		11.34	□□□□□ -0.59
MRPL28-203	ENST00000429738	TMEM191A	Q9H0A3	160 aa		11.34	□□□□□ -0.59
MRPL28-203	ENST00000429738		A0A1B0GUT8	65 aa		11.33	□□□□□ -0.6
MRPL28-203	ENST00000429738		I3L3M4	83 aa		11.33	□□□□□ -0.6
MRPL28-203	ENST00000429738	FGF6	P10767	208 aa		11.33	□□□□□ -0.6
MRPL28-203	ENST00000429738	BORCS7	Q96B45	105 aa		11.33	□□□□□ -0.6
MRPL28-203	ENST00000429738	RNF185	Q96GF1	192 aa		11.33	□□□□□ -0.6
MRPL28-203	ENST00000429738	GAGE12H	A6NDE8	117 aa		11.32	□□□□□ -0.6
MRPL28-203	ENST00000429738	ESD	P10768	282 aa		11.32	□□□□□ -0.6
MRPL28-203	ENST00000429738	ZNF25	P17030	456 aa	Predicted RBP	11.32	□□□□□ -0.6
MRPL28-203	ENST00000429738	AMMECR1L	Q6DCA0	310 aa		11.32	□□□□□ -0.6
MRPL28-203	ENST00000429738	AP5S1	Q9NUS5	200 aa		11.32	□□□□□ -0.6
MRPL28-203	ENST00000429738		V9GYV3	84 aa		11.32	□□□□□ -0.6
MRPL28-203	ENST00000429738	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.31	□□□□□ -0.6
MRPL28-203	ENST00000429738	RAB4A	P20338	218 aa		11.31	□□□□□ -0.6
MRPL28-203	ENST00000429738	POLR2K	P53803	58 aa	Known RBP	11.31	□□□□□ -0.6
MRPL28-203	ENST00000429738	RPL37A	P61513	92 aa	Known RBP	11.31	□□□□□ -0.6
MRPL28-203	ENST00000429738	RNASEK	Q6P5S7	137 aa	Known RBP	11.31	□□□□□ -0.6
MRPL28-203	ENST00000429738	IGHV3-64	A0A075B6Q5	118 aa		11.3	□□□□□ -0.6
MRPL28-203	ENST00000429738	IGKV3OR2-268	A0A0C4DH90	116 aa		11.3	□□□□□ -0.6
MRPL28-203	ENST00000429738	TSHB	P01222	138 aa		11.3	□□□□□ -0.6
MRPL28-203	ENST00000429738	PMCH	P20382	165 aa		11.3	□□□□□ -0.6
MRPL28-203	ENST00000429738	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.3	□□□□□ -0.6
MRPL28-203	ENST00000429738	ISOC2	Q96AB3	205 aa		11.3	□□□□□ -0.6
MRPL28-203	ENST00000429738	ST20	Q9HBF5	79 aa		11.3	□□□□□ -0.6
MRPL28-203	ENST00000429738	TRBV27	A0A0K0K1C4	114 aa		11.29	□□□□□ -0.6
MRPL28-203	ENST00000429738	RPS10	P46783	165 aa	Known RBP	11.29	□□□□□ -0.6
MRPL28-203	ENST00000429738	CFAP161	Q6P656	301 aa		11.29	□□□□□ -0.6
MRPL28-203	ENST00000429738	AMN1	Q8IY45	258 aa		11.29	□□□□□ -0.6
MRPL28-203	ENST00000429738	NUP35	Q8NFH5	326 aa		11.29	□□□□□ -0.6
MRPL28-203	ENST00000429738	OR5A1	Q8NGJ0	315 aa		11.29	□□□□□ -0.6
MRPL28-203	ENST00000429738	MRAP2	Q96G30	205 aa		11.29	□□□□□ -0.6
MRPL28-203	ENST00000429738	HNRNPA3	P51991	378 aa	Known RBP	11.28	□□□□□ -0.6
MRPL28-203	ENST00000429738	FAM74A3	Q4VXF1	159 aa		11.28	□□□□□ -0.6
MRPL28-203	ENST00000429738	TMEM242	Q9NWH2	141 aa		11.28	□□□□□ -0.6
MRPL28-203	ENST00000429738	RPL23	P62829	140 aa	Known RBP	11.27	□□□□□ -0.61
MRPL28-203	ENST00000429738	FOXI1	Q12951	378 aa		11.27	□□□□□ -0.61
MRPL28-203	ENST00000429738	MRPL52	Q86TS9	123 aa	Known RBP	11.27	□□□□□ -0.61
MRPL28-203	ENST00000429738	SPACA4	Q8TDM5	124 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms