RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
GARNL3-204ENST00000429629 MT-ND6P03923 174 aa10.13□□□□□ -0.79
GARNL3-204ENST00000429629 PMCHP20382 165 aa10.13□□□□□ -0.79
GARNL3-204ENST00000429629 LAGE3Q14657 143 aa10.13□□□□□ -0.79
GARNL3-204ENST00000429629 A0A087WX48 190 aa10.12□□□□□ -0.79
GARNL3-204ENST00000429629 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
GARNL3-204ENST00000429629 D6R8Y8 96 aa10.12□□□□□ -0.79
GARNL3-204ENST00000429629 LINC00336Q6ZUF6 198 aa10.12□□□□□ -0.79
GARNL3-204ENST00000429629 NFE4Q86UQ8 179 aa10.12□□□□□ -0.79
GARNL3-204ENST00000429629 C6orf223Q8N319 242 aa10.12□□□□□ -0.79
GARNL3-204ENST00000429629 TMEM243Q9BU79 118 aa10.12□□□□□ -0.79
GARNL3-204ENST00000429629 KRTAP1-5Q9BYS1 174 aa10.12□□□□□ -0.79
GARNL3-204ENST00000429629 SMKR1H3BMG3 65 aa10.11□□□□□ -0.79
GARNL3-204ENST00000429629 KIR2DL4Q99706 377 aa10.11□□□□□ -0.79
GARNL3-204ENST00000429629 CHCHD5Q9BSY4 110 aa10.11□□□□□ -0.79
GARNL3-204ENST00000429629 DNAH2Q9P225 4427 aa10.11□□□□□ -0.79
GARNL3-204ENST00000429629 TMEM262E9PQX1 116 aa10.1□□□□□ -0.79
GARNL3-204ENST00000429629 ESDP10768 282 aa10.1□□□□□ -0.79
GARNL3-204ENST00000429629 AMTP48728 403 aa10.1□□□□□ -0.79
GARNL3-204ENST00000429629 PRELID3AQ96N28 172 aa10.1□□□□□ -0.79
GARNL3-204ENST00000429629 SMCO4Q9NRQ5 59 aa10.1□□□□□ -0.79
GARNL3-204ENST00000429629 TSHBP01222 138 aa10.09□□□□□ -0.79
GARNL3-204ENST00000429629 APCSP02743 223 aa10.09□□□□□ -0.79
GARNL3-204ENST00000429629 ATRAIDQ6UW56 229 aa10.09□□□□□ -0.79
GARNL3-204ENST00000429629 YPEL4Q96NS1 127 aa10.09□□□□□ -0.79
GARNL3-204ENST00000429629 TRAV8-3A0A0A6YYJ7 113 aa10.08□□□□□ -0.8
GARNL3-204ENST00000429629 K7EMI3 77 aa10.08□□□□□ -0.8
GARNL3-204ENST00000429629 RTL8CO15255 209 aa10.08□□□□□ -0.8
GARNL3-204ENST00000429629 NPYP01303 97 aa10.08□□□□□ -0.8
GARNL3-204ENST00000429629 IGHV3-30P01768 117 aa10.08□□□□□ -0.8
GARNL3-204ENST00000429629 IGHV3-33P01772 117 aa10.08□□□□□ -0.8
GARNL3-204ENST00000429629 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
GARNL3-204ENST00000429629 IGHV3-30-5P0DP03 117 aa10.08□□□□□ -0.8
GARNL3-204ENST00000429629 DNAH10Q8IVF4 4471 aa10.07□□□□□ -0.8
GARNL3-204ENST00000429629 RBX1P62877 108 aa10.07□□□□□ -0.8
GARNL3-204ENST00000429629 Q0VG73 95 aa10.07□□□□□ -0.8
GARNL3-204ENST00000429629 SMIM2Q9BVW6 85 aa10.07□□□□□ -0.8
GARNL3-204ENST00000429629 TGIF2-C20orf24A0A0A6YYL0 155 aa10.06□□□□□ -0.8
GARNL3-204ENST00000429629 UBE2L6O14933 153 aa10.06□□□□□ -0.8
GARNL3-204ENST00000429629 ZNF25P17030 456 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-204ENST00000429629 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
GARNL3-204ENST00000429629 MPV17L2Q567V2 206 aa10.06□□□□□ -0.8
GARNL3-204ENST00000429629 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-204ENST00000429629 MAP1LC3AQ9H492 121 aa10.06□□□□□ -0.8
GARNL3-204ENST00000429629 COX11Q9Y6N1 276 aa10.06□□□□□ -0.8
GARNL3-204ENST00000429629 FCER1GP30273 86 aa10.05□□□□□ -0.8
GARNL3-204ENST00000429629 GAGE6Q13070 117 aa10.05□□□□□ -0.8
GARNL3-204ENST00000429629 MRPL52Q86TS9 123 aaKnown RBP10.05□□□□□ -0.8
GARNL3-204ENST00000429629 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
GARNL3-204ENST00000429629 PRR34Q9NV39 138 aa10.05□□□□□ -0.8
GARNL3-204ENST00000429629 CSDC2Q9Y534 153 aaKnown RBP10.05□□□□□ -0.8
GARNL3-204ENST00000429629 Q8N3U1 123 aa10.04□□□□□ -0.8
GARNL3-204ENST00000429629 Q8N8P6 123 aa10.04□□□□□ -0.8
GARNL3-204ENST00000429629 TMEM18Q96B42 140 aa10.04□□□□□ -0.8
GARNL3-204ENST00000429629 RMI2Q96E14 147 aa10.04□□□□□ -0.8
GARNL3-204ENST00000429629 MRPL18Q9H0U6 180 aaKnown RBP10.04□□□□□ -0.8
GARNL3-204ENST00000429629 NXT2Q9NPJ8 142 aaKnown RBP10.04□□□□□ -0.8
GARNL3-204ENST00000429629 KLK12Q9UKR0 248 aa10.04□□□□□ -0.8
GARNL3-204ENST00000429629 DNAH17Q9UFH2 4485 aa10.03□□□□□ -0.8
GARNL3-204ENST00000429629 RAB5AP20339 215 aa10.03□□□□□ -0.8
GARNL3-204ENST00000429629 FABP9Q0Z7S8 132 aa10.03□□□□□ -0.8
GARNL3-204ENST00000429629 Q8N976 141 aa10.03□□□□□ -0.8
GARNL3-204ENST00000429629 ALKBH7Q9BT30 221 aaPredicted RBP10.03□□□□□ -0.8
GARNL3-204ENST00000429629 TIMM21Q9BVV7 248 aa10.03□□□□□ -0.8
GARNL3-204ENST00000429629 TRAPPC1Q9Y5R8 145 aa10.03□□□□□ -0.8
GARNL3-204ENST00000429629 ANGP03950 147 aaKnown RBP10.02□□□□□ -0.81
GARNL3-204ENST00000429629 FGF6P10767 208 aa10.02□□□□□ -0.81
GARNL3-204ENST00000429629 G0S2P27469 103 aa10.02□□□□□ -0.81
GARNL3-204ENST00000429629 MIAQ16674 131 aa10.02□□□□□ -0.81
GARNL3-204ENST00000429629 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
GARNL3-204ENST00000429629 TRAV8-4A0A0B4J246 113 aa10.01□□□□□ -0.81
GARNL3-204ENST00000429629 PRSS29PA6NIE9 313 aa10.01□□□□□ -0.81
GARNL3-204ENST00000429629 KIAA1644Q3SXP7 199 aa10.01□□□□□ -0.81
GARNL3-204ENST00000429629 AMMECR1LQ6DCA0 310 aa10.01□□□□□ -0.81
GARNL3-204ENST00000429629 ENHOQ6UWT2 76 aa10.01□□□□□ -0.81
GARNL3-204ENST00000429629 CBLN2Q8IUK8 224 aa10.01□□□□□ -0.81
GARNL3-204ENST00000429629 DEFB104AQ8WTQ1 72 aa10.01□□□□□ -0.81
GARNL3-204ENST00000429629 IGLV4-60A0A075B6I1 120 aa10□□□□□ -0.81
GARNL3-204ENST00000429629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
GARNL3-204ENST00000429629 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
GARNL3-204ENST00000429629 LINC00269Q8N2A0 174 aa10□□□□□ -0.81
GARNL3-204ENST00000429629 UBE2WQ96B02 151 aa10□□□□□ -0.81
GARNL3-204ENST00000429629 TMEM101Q96IK0 257 aa10□□□□□ -0.81
GARNL3-204ENST00000429629 FAT2Q9NYQ8 4349 aa9.99□□□□□ -0.81
GARNL3-204ENST00000429629 LINC01546A6NGU7 62 aa9.99□□□□□ -0.81
GARNL3-204ENST00000429629 CRPP02741 224 aa9.99□□□□□ -0.81
GARNL3-204ENST00000429629 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
GARNL3-204ENST00000429629 LOC389332A0A1B0GUA5 103 aa9.98□□□□□ -0.81
GARNL3-204ENST00000429629 LINC01549A6NIU2 74 aa9.98□□□□□ -0.81
GARNL3-204ENST00000429629 S100A1P23297 94 aa9.98□□□□□ -0.81
GARNL3-204ENST00000429629 REG3AQ06141 175 aa9.98□□□□□ -0.81
GARNL3-204ENST00000429629 RNASEKQ6P5S7 137 aaKnown RBP9.98□□□□□ -0.81
GARNL3-204ENST00000429629 OR5A1Q8NGJ0 315 aa9.98□□□□□ -0.81
GARNL3-204ENST00000429629 CDC42SE2Q9NRR3 84 aa9.98□□□□□ -0.81
GARNL3-204ENST00000429629 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
GARNL3-204ENST00000429629 PYGO1Q9Y3Y4 419 aa9.98□□□□□ -0.81
GARNL3-204ENST00000429629 COLCA2A8K830 154 aa9.97□□□□□ -0.81
GARNL3-204ENST00000429629 CCL25O15444 150 aa9.97□□□□□ -0.81
GARNL3-204ENST00000429629 NPSP0C0P6 89 aa9.97□□□□□ -0.81
GARNL3-204ENST00000429629 IFI27P40305 119 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms