RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 IGKV3OR2-268A0A0C4DH90 116 aa6.06□□□□□ -1.44
HPS4-205ENST00000429411 FOXI2Q6ZQN5 318 aa6.06□□□□□ -1.44
HPS4-205ENST00000429411 INAFM1C9JVW0 142 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 PPP1R17O96001 155 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 LGALS1P09382 135 aaKnown RBP6.05□□□□□ -1.44
HPS4-205ENST00000429411 DEFB131AP59861 70 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 C1orf195Q5TG92 126 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 CD28P10747 220 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 PMVKQ15126 192 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 RRN3P1Q2M238 152 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 LINC01620Q4KN68 170 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 ZFP2Q6ZN57 461 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 CNFNQ9BYD5 112 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 P0DMU3 169 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 FAM231AP0DMU4 169 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 FAM231CP0DMU5 169 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 INSL3P51460 131 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 CEMP1Q6PRD7 247 aaPredicted RBP6.05□□□□□ -1.44
HPS4-205ENST00000429411 Q8N1Y9 231 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 C20orf78Q9BR46 151 aa6.05□□□□□ -1.44
HPS4-205ENST00000429411 B4DSR2 109 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 RNASE3P12724 160 aaKnown RBP6.04□□□□□ -1.44
HPS4-205ENST00000429411 TOMM6Q96B49 74 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 ZNF625Q96I27 306 aaPredicted RBP6.04□□□□□ -1.44
HPS4-205ENST00000429411 HIGD1BQ9P298 99 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 IGLV2-18A0A075B6J9 118 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 FAM236DA0A1B0GTK5 79 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 AVPP01185 164 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 IGHV3-53P01767 116 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 FAM236CP0DP71 79 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 LINC01587Q99440 93 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 EDA2RQ9HAV5 297 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 A0A0J9YXV3 536 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 DLX4Q92988 240 aaPredicted RBP6.04□□□□□ -1.44
HPS4-205ENST00000429411 UBE2E2Q96LR5 201 aa6.04□□□□□ -1.44
HPS4-205ENST00000429411 IGHG2P01859 326 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 LYRM7Q5U5X0 104 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 HRCT1Q6UXD1 115 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 GPHB5Q86YW7 130 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 SPINK8P0C7L1 97 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 VPREB1P12018 145 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 NEXN-AS1Q8NBZ9 246 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 PIFOQ8TCI5 191 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 C10orf105Q8TEF2 133 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 DNAJC30Q96LL9 226 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 LENEPQ9Y5L5 61 aa6.03□□□□□ -1.44
HPS4-205ENST00000429411 IGHV1OR15-1A0A075B7D0 117 aa6.02□□□□□ -1.44
HPS4-205ENST00000429411 J3QQQ9 107 aa6.02□□□□□ -1.44
HPS4-205ENST00000429411 RHODO00212 210 aa6.02□□□□□ -1.44
HPS4-205ENST00000429411 ZNF575Q86XF7 245 aa6.02□□□□□ -1.44
HPS4-205ENST00000429411 MUC4Q99102 2169 aa6.02□□□□□ -1.45
HPS4-205ENST00000429411 C9JAW5 83 aa6.02□□□□□ -1.45
HPS4-205ENST00000429411 F8W1H4 67 aa6.02□□□□□ -1.45
HPS4-205ENST00000429411 PROK1P58294 105 aa6.02□□□□□ -1.45
HPS4-205ENST00000429411 COX8CQ7Z4L0 72 aa6.02□□□□□ -1.45
HPS4-205ENST00000429411 C3orf56Q8N813 242 aa6.02□□□□□ -1.45
HPS4-205ENST00000429411 TM2D2Q9BX73 214 aa6.02□□□□□ -1.45
HPS4-205ENST00000429411 SLURP1P55000 103 aa6.02□□□□□ -1.45
HPS4-205ENST00000429411 APRG1Q8IVJ8 170 aa6.02□□□□□ -1.45
HPS4-205ENST00000429411 MXRA5Q9NR99 2828 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 E9PLD3 99 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 PAPPA-AS1Q5QFB9 102 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 XCL2Q9UBD3 114 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 U3KQE9 123 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 IGHV4OR15-8A0A075B7B6 117 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 A0A087WW49 117 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 LY6G6DO95868 133 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 HOXD3P31249 432 aaPredicted RBP6.01□□□□□ -1.45
HPS4-205ENST00000429411 LINC01561Q8N1V8 128 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.01□□□□□ -1.45
HPS4-205ENST00000429411 TRAV8-3A0A0A6YYJ7 113 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 IGKV2-29A2NJV5 120 aaPredicted RBP6.01□□□□□ -1.45
HPS4-205ENST00000429411 A6NDX4 124 aa6.01□□□□□ -1.45
HPS4-205ENST00000429411 TRAV12-1A0A0B4J245 112 aa6□□□□□ -1.45
HPS4-205ENST00000429411 A0A0U1RQV1 116 aa6□□□□□ -1.45
HPS4-205ENST00000429411 SERTAD4-AS1Q5TG53 156 aa6□□□□□ -1.45
HPS4-205ENST00000429411 DAND5Q8N907 189 aa6□□□□□ -1.45
HPS4-205ENST00000429411 A8MWV9 139 aa6□□□□□ -1.45
HPS4-205ENST00000429411 CCL24O00175 119 aa6□□□□□ -1.45
HPS4-205ENST00000429411 CCDC179H3BU77 68 aa6□□□□□ -1.45
HPS4-205ENST00000429411 J3KT08 172 aa6□□□□□ -1.45
HPS4-205ENST00000429411 MEIG1Q5JSS6 88 aa6□□□□□ -1.45
HPS4-205ENST00000429411 TRPT1Q86TN4 253 aaKnown RBP6□□□□□ -1.45
HPS4-205ENST00000429411 ZNF580Q9UK33 172 aa6□□□□□ -1.45
HPS4-205ENST00000429411 C18orf65Q6ZTR6 163 aa5.99□□□□□ -1.45
HPS4-205ENST00000429411 TIMM21Q9BVV7 248 aa5.99□□□□□ -1.45
HPS4-205ENST00000429411 SPANXB1Q9NS25 103 aaPredicted RBP5.99□□□□□ -1.45
HPS4-205ENST00000429411 SPANXA1Q9NS26 97 aa5.99□□□□□ -1.45
HPS4-205ENST00000429411 TRBV7-3A0A075B6L6 115 aa5.99□□□□□ -1.45
HPS4-205ENST00000429411 CFHR3Q02985 330 aa5.99□□□□□ -1.45
HPS4-205ENST00000429411 A0A0J9YX75 114 aa5.98□□□□□ -1.45
HPS4-205ENST00000429411 I3L3M4 83 aa5.98□□□□□ -1.45
HPS4-205ENST00000429411 LINC00694P0DN24 101 aa5.98□□□□□ -1.45
HPS4-205ENST00000429411 LINC00336Q6ZUF6 198 aa5.98□□□□□ -1.45
HPS4-205ENST00000429411 ZNRF2Q8NHG8 242 aa5.98□□□□□ -1.45
HPS4-205ENST00000429411 PRO1854Q9UHT4 67 aa5.98□□□□□ -1.45
HPS4-205ENST00000429411 TRGV11A0A075B6L2 103 aa5.98□□□□□ -1.45
HPS4-205ENST00000429411 TRAV13-1A0A0B4J241 112 aa5.98□□□□□ -1.45
HPS4-205ENST00000429411 TSPEAR-AS2P59090 65 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms