RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 HIGD2AQ9BW72 106 aa9.6□□□□□ -0.87
LDB3-205ENST00000429277 PLCE1Q9P212 2302 aa9.6□□□□□ -0.87
LDB3-205ENST00000429277 LY6LH3BQJ8 138 aa9.6□□□□□ -0.87
LDB3-205ENST00000429277 FAM110AQ9BQ89 295 aa9.6□□□□□ -0.87
LDB3-205ENST00000429277 ANKHD1Q8IWZ3 2542 aaKnown RBP9.59□□□□□ -0.87
LDB3-205ENST00000429277 IGKV2-24A0A0C4DH68 120 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 PLA2G5P39877 138 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 LINC01548A6NM66 108 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 G3V4G9 280 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 PYGO1Q9Y3Y4 419 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 TRBV6-8A0A0A6YYG3 113 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 TMEM223A0PJW6 202 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 EIF4EBP1Q13541 118 aaPredicted RBP9.59□□□□□ -0.87
LDB3-205ENST00000429277 CEMP1Q6PRD7 247 aaPredicted RBP9.59□□□□□ -0.87
LDB3-205ENST00000429277 MBD6Q96DN6 1003 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 LINC00467Q9BRT7 94 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 ZFHX2Q9C0A1 2572 aaPredicted RBP9.59□□□□□ -0.87
LDB3-205ENST00000429277 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
LDB3-205ENST00000429277 TNCP24821 2201 aa9.58□□□□□ -0.88
LDB3-205ENST00000429277 TP53TG3Q9ULZ0 132 aa9.58□□□□□ -0.88
LDB3-205ENST00000429277 IGLV4-3A0A075B6K6 122 aa9.58□□□□□ -0.88
LDB3-205ENST00000429277 IGKV2D-26A0A0A0MRZ7 120 aa9.58□□□□□ -0.88
LDB3-205ENST00000429277 TRBV6-5A0A0K0K1A5 114 aa9.58□□□□□ -0.88
LDB3-205ENST00000429277 TCL1BO95988 128 aa9.58□□□□□ -0.88
LDB3-205ENST00000429277 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
LDB3-205ENST00000429277 BRWD1-AS2P59051 145 aa9.58□□□□□ -0.88
LDB3-205ENST00000429277 IGKV4-1P06312 121 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 CDKN2A-AS1Q9UH64 79 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 DENND4AQ7Z401 1863 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 TRAV10A0A0B4J240 114 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 FAM19A1Q7Z5A9 133 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 MUC7Q8TAX7 377 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 PSMG3-AS1Q96PY0 264 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 TIMM17BO60830 172 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 CFAP126Q5VTH2 177 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 Q6ZSV7 163 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 TMEM131Q92545 1883 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 LINC00322Q6ZN03 302 aaPredicted RBP9.57□□□□□ -0.88
LDB3-205ENST00000429277 C11orf71Q6IPW1 123 aa9.57□□□□□ -0.88
LDB3-205ENST00000429277 C19orf84I3L1E1 186 aa9.56□□□□□ -0.88
LDB3-205ENST00000429277 M0QY20 66 aa9.56□□□□□ -0.88
LDB3-205ENST00000429277 P0DMU3 169 aa9.56□□□□□ -0.88
LDB3-205ENST00000429277 FAM231AP0DMU4 169 aa9.56□□□□□ -0.88
LDB3-205ENST00000429277 FAM231CP0DMU5 169 aa9.56□□□□□ -0.88
LDB3-205ENST00000429277 FRMD6-AS1P0C7T7 363 aa9.56□□□□□ -0.88
LDB3-205ENST00000429277 SYCNQ0VAF6 134 aa9.56□□□□□ -0.88
LDB3-205ENST00000429277 LINC00308Q8TCZ7 52 aa9.56□□□□□ -0.88
LDB3-205ENST00000429277 CASC2Q6XLA1 102 aa9.55□□□□□ -0.88
LDB3-205ENST00000429277 U3KQK5 164 aa9.55□□□□□ -0.88
LDB3-205ENST00000429277 TRBV27A0A0K0K1C4 114 aa9.55□□□□□ -0.88
LDB3-205ENST00000429277 C7orf33Q8WU49 177 aa9.55□□□□□ -0.88
LDB3-205ENST00000429277 ZNF706Q9Y5V0 76 aaPredicted RBP9.55□□□□□ -0.88
LDB3-205ENST00000429277 USP17L23D6RBM5 183 aa9.55□□□□□ -0.88
LDB3-205ENST00000429277 A0A087WZ39 114 aa9.54□□□□□ -0.88
LDB3-205ENST00000429277 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
LDB3-205ENST00000429277 WFDC11Q8NEX6 87 aa9.54□□□□□ -0.88
LDB3-205ENST00000429277 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
LDB3-205ENST00000429277 TECTAO75443 2155 aa9.54□□□□□ -0.88
LDB3-205ENST00000429277 WISP2O76076 250 aa9.54□□□□□ -0.88
LDB3-205ENST00000429277 PIK3CD-AS1Q5SR53 167 aa9.53□□□□□ -0.88
LDB3-205ENST00000429277 KIF26AQ9ULI4 1882 aaPredicted RBP9.53□□□□□ -0.88
LDB3-205ENST00000429277 OBSL1O75147 1896 aa9.53□□□□□ -0.88
LDB3-205ENST00000429277 MRGPRG-AS1Q2M3A8 158 aa9.53□□□□□ -0.88
LDB3-205ENST00000429277 RNASE8Q8TDE3 154 aaKnown RBP9.53□□□□□ -0.88
LDB3-205ENST00000429277 GDF5OSQ5U4N7 250 aa9.53□□□□□ -0.88
LDB3-205ENST00000429277 UQCRQO14949 82 aa9.52□□□□□ -0.88
LDB3-205ENST00000429277 CD164L2Q6UWJ8 174 aa9.52□□□□□ -0.88
LDB3-205ENST00000429277 DHRS4-AS1Q9P1J3 65 aa9.52□□□□□ -0.88
LDB3-205ENST00000429277 COL4A3Q01955 1670 aa9.52□□□□□ -0.89
LDB3-205ENST00000429277 INAFM1C9JVW0 142 aa9.52□□□□□ -0.89
LDB3-205ENST00000429277 ZNF295-AS1Q8N0V1 137 aa9.52□□□□□ -0.89
LDB3-205ENST00000429277 TNRC6BQ9UPQ9 1833 aaKnown RBP9.51□□□□□ -0.89
LDB3-205ENST00000429277 PTH2Q96A98 100 aa9.51□□□□□ -0.89
LDB3-205ENST00000429277 K7ERS5 55 aa9.51□□□□□ -0.89
LDB3-205ENST00000429277 Q8N6K4 173 aa9.51□□□□□ -0.89
LDB3-205ENST00000429277 TP73-AS1Q9UF72 201 aa9.51□□□□□ -0.89
LDB3-205ENST00000429277 Q6ZPA2 131 aa9.51□□□□□ -0.89
LDB3-205ENST00000429277 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
LDB3-205ENST00000429277 TRAV23DV6A0A075B6W5 121 aa9.5□□□□□ -0.89
LDB3-205ENST00000429277 LELP1Q5T871 98 aa9.5□□□□□ -0.89
LDB3-205ENST00000429277 TTC28Q96AY4 2481 aa9.5□□□□□ -0.89
LDB3-205ENST00000429277 NOTCH2Q04721 2471 aa9.5□□□□□ -0.89
LDB3-205ENST00000429277 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
LDB3-205ENST00000429277 ZNF702PQ9H963 129 aa9.49□□□□□ -0.89
LDB3-205ENST00000429277 LTBP2Q14767 1821 aa9.49□□□□□ -0.89
LDB3-205ENST00000429277 M0R378 163 aa9.49□□□□□ -0.89
LDB3-205ENST00000429277 ATP5EP56381 51 aaPredicted RBP9.49□□□□□ -0.89
LDB3-205ENST00000429277 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.49□□□□□ -0.89
LDB3-205ENST00000429277 CRIP3Q6Q6R5 217 aa9.49□□□□□ -0.89
LDB3-205ENST00000429277 C1orf229Q6ZS94 237 aaPredicted RBP9.49□□□□□ -0.89
LDB3-205ENST00000429277 RNF185Q96GF1 192 aa9.49□□□□□ -0.89
LDB3-205ENST00000429277 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
LDB3-205ENST00000429277 RBX1P62877 108 aa9.49□□□□□ -0.89
LDB3-205ENST00000429277 COX17Q14061 63 aa9.48□□□□□ -0.89
LDB3-205ENST00000429277 SPG11Q96JI7 2443 aa9.48□□□□□ -0.89
LDB3-205ENST00000429277 BDP1A6H8Y1 2624 aa9.48□□□□□ -0.89
LDB3-205ENST00000429277 NDUFC1O43677 76 aa9.48□□□□□ -0.89
LDB3-205ENST00000429277 V9GYY9 64 aa9.48□□□□□ -0.89
LDB3-205ENST00000429277 KLLNB2CW77 178 aa9.48□□□□□ -0.89
LDB3-205ENST00000429277 CRIP1P50238 77 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms