RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 KLK12Q9UKR0 248 aa9.86□□□□□ -0.83
SGCE-204ENST00000428696 DNAH6Q9C0G6 4158 aa9.86□□□□□ -0.83
SGCE-204ENST00000428696 RTL8CO15255 209 aa9.85□□□□□ -0.83
SGCE-204ENST00000428696 TNFRSF6BO95407 300 aa9.85□□□□□ -0.83
SGCE-204ENST00000428696 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
SGCE-204ENST00000428696 ORMDL3Q8N138 153 aa9.85□□□□□ -0.83
SGCE-204ENST00000428696 NRACQ8N912 160 aa9.85□□□□□ -0.83
SGCE-204ENST00000428696 TMEM70Q9BUB7 260 aa9.85□□□□□ -0.83
SGCE-204ENST00000428696 TRAV9-1A0A075B6T8 112 aa9.84□□□□□ -0.83
SGCE-204ENST00000428696 PRSS29PA6NIE9 313 aa9.84□□□□□ -0.83
SGCE-204ENST00000428696 K7EP13 123 aa9.84□□□□□ -0.83
SGCE-204ENST00000428696 APCSP02743 223 aa9.84□□□□□ -0.83
SGCE-204ENST00000428696 PPBPP02775 128 aa9.84□□□□□ -0.83
SGCE-204ENST00000428696 SUMO2P61956 95 aaKnown RBP9.84□□□□□ -0.83
SGCE-204ENST00000428696 IQCJQ1A5X6 159 aa9.84□□□□□ -0.83
SGCE-204ENST00000428696 Q8N976 141 aa9.84□□□□□ -0.83
SGCE-204ENST00000428696 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
SGCE-204ENST00000428696 LOC389332A0A1B0GUA5 103 aa9.83□□□□□ -0.84
SGCE-204ENST00000428696 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
SGCE-204ENST00000428696 PKIAP61925 76 aa9.83□□□□□ -0.84
SGCE-204ENST00000428696 ELOBQ15370 118 aa9.83□□□□□ -0.84
SGCE-204ENST00000428696 KIAA1644Q3SXP7 199 aa9.83□□□□□ -0.84
SGCE-204ENST00000428696 MPV17L2Q567V2 206 aa9.83□□□□□ -0.84
SGCE-204ENST00000428696 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
SGCE-204ENST00000428696 ATRAIDQ6UW56 229 aa9.83□□□□□ -0.84
SGCE-204ENST00000428696 NFE4Q86UQ8 179 aa9.83□□□□□ -0.84
SGCE-204ENST00000428696 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.82□□□□□ -0.84
SGCE-204ENST00000428696 TGIF2-C20orf24A0A0A6YYL0 155 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 IGKV2-29A2NJV5 120 aaPredicted RBP9.82□□□□□ -0.84
SGCE-204ENST00000428696 PSCAO43653 123 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 NPYP01303 97 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 POLR2KP53803 58 aaKnown RBP9.82□□□□□ -0.84
SGCE-204ENST00000428696 UBE2WQ96B02 151 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 KIR2DL4Q99706 377 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 PGPEP1Q9NXJ5 209 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 TSHBP01222 138 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 RBX1P62877 108 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 RNASEKQ6P5S7 137 aaKnown RBP9.82□□□□□ -0.84
SGCE-204ENST00000428696 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 LINC00336Q6ZUF6 198 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 C20orf78Q9BR46 151 aa9.82□□□□□ -0.84
SGCE-204ENST00000428696 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
SGCE-204ENST00000428696 CRPP02741 224 aa9.81□□□□□ -0.84
SGCE-204ENST00000428696 TRBV24-1A0A075B6N3 115 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 TRAV8-3A0A0A6YYJ7 113 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 TNP2Q05952 138 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 FABP9Q0Z7S8 132 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 LCE2CQ5TA81 110 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 LINC00269Q8N2A0 174 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 CHCHD7Q9BUK0 85 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 GNB1LQ9BYB4 327 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 MAP1LC3AQ9H492 121 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 DNAH2Q9P225 4427 aa9.8□□□□□ -0.84
SGCE-204ENST00000428696 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
SGCE-204ENST00000428696 TCAPO15273 167 aa9.79□□□□□ -0.84
SGCE-204ENST00000428696 HLA-DQA1P01909 254 aa9.79□□□□□ -0.84
SGCE-204ENST00000428696 RAB5AP20339 215 aa9.79□□□□□ -0.84
SGCE-204ENST00000428696 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
SGCE-204ENST00000428696 IGKV2D-24A0A075B6R9 120 aa9.78□□□□□ -0.84
SGCE-204ENST00000428696 BTF3P20290 206 aaKnown RBP9.78□□□□□ -0.84
SGCE-204ENST00000428696 COX19Q49B96 90 aa9.78□□□□□ -0.84
SGCE-204ENST00000428696 CBLN2Q8IUK8 224 aa9.78□□□□□ -0.84
SGCE-204ENST00000428696 TMEM101Q96IK0 257 aa9.78□□□□□ -0.84
SGCE-204ENST00000428696 SMIM2Q9BVW6 85 aa9.78□□□□□ -0.84
SGCE-204ENST00000428696 SMCO4Q9NRQ5 59 aa9.78□□□□□ -0.84
SGCE-204ENST00000428696 IGLV4-60A0A075B6I1 120 aa9.77□□□□□ -0.85
SGCE-204ENST00000428696 PHOX2AO14813 284 aa9.77□□□□□ -0.85
SGCE-204ENST00000428696 FGF6P10767 208 aa9.77□□□□□ -0.85
SGCE-204ENST00000428696 LAGE3Q14657 143 aa9.77□□□□□ -0.85
SGCE-204ENST00000428696 DGAT2L7PQ6IED9 249 aa9.77□□□□□ -0.85
SGCE-204ENST00000428696 TM2D2Q9BX73 214 aa9.77□□□□□ -0.85
SGCE-204ENST00000428696 TRAPPC1Q9Y5R8 145 aa9.77□□□□□ -0.85
SGCE-204ENST00000428696 DNAH10Q8IVF4 4471 aa9.77□□□□□ -0.85
SGCE-204ENST00000428696 RMI2Q96E14 147 aa9.76□□□□□ -0.85
SGCE-204ENST00000428696 LAMTOR2Q9Y2Q5 125 aa9.76□□□□□ -0.85
SGCE-204ENST00000428696 MT-ND6P03923 174 aa9.75□□□□□ -0.85
SGCE-204ENST00000428696 Q0VG73 95 aa9.75□□□□□ -0.85
SGCE-204ENST00000428696 ENHOQ6UWT2 76 aa9.75□□□□□ -0.85
SGCE-204ENST00000428696 OR5A1Q8NGJ0 315 aa9.75□□□□□ -0.85
SGCE-204ENST00000428696 IGLV10-54A0A075B6I4 117 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 A0A1B0GUV1 79 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 H7C423 109 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 EREGO14944 169 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 ESDP10768 282 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 REG3AQ06141 175 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 C20orf203Q8NBC4 194 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 PRSS3P2Q8NHM4 247 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 TMEM18Q96B42 140 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 C1orf43Q9BWL3 253 aa9.74□□□□□ -0.85
SGCE-204ENST00000428696 J3QL48 77 aa9.73□□□□□ -0.85
SGCE-204ENST00000428696 RPL32P62910 135 aaKnown RBP9.73□□□□□ -0.85
SGCE-204ENST00000428696 Q6ZRN7 208 aaPredicted RBP9.73□□□□□ -0.85
SGCE-204ENST00000428696 FRAS1Q86XX4 4008 aa9.73□□□□□ -0.85
SGCE-204ENST00000428696 LECT2O14960 151 aa9.73□□□□□ -0.85
SGCE-204ENST00000428696 IFI27P40305 119 aaPredicted RBP9.73□□□□□ -0.85
SGCE-204ENST00000428696 Q8N8P6 123 aa9.73□□□□□ -0.85
SGCE-204ENST00000428696 RPL39P62891 51 aaKnown RBP9.72□□□□□ -0.85
SGCE-204ENST00000428696 SMAGPQ0VAQ4 97 aa9.72□□□□□ -0.85
SGCE-204ENST00000428696 MIAQ16674 131 aa9.72□□□□□ -0.85
SGCE-204ENST00000428696 BAALCQ8WXS3 180 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms