RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 RASL11AQ6T310 242 aa10.5□□□□□ -0.73
VARS-216ENST00000428445 Q6ZRU5 148 aa10.5□□□□□ -0.73
VARS-216ENST00000428445 GNG13Q9P2W3 67 aa10.5□□□□□ -0.73
VARS-216ENST00000428445 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.49□□□□□ -0.73
VARS-216ENST00000428445 GNG4P50150 75 aa10.49□□□□□ -0.73
VARS-216ENST00000428445 CENPWQ5EE01 88 aa10.49□□□□□ -0.73
VARS-216ENST00000428445 C9orf62Q8N4C0 152 aa10.49□□□□□ -0.73
VARS-216ENST00000428445 RNF185Q96GF1 192 aa10.49□□□□□ -0.73
VARS-216ENST00000428445 TMEM243Q9BU79 118 aa10.49□□□□□ -0.73
VARS-216ENST00000428445 LRP2P98164 4655 aa10.48□□□□□ -0.73
VARS-216ENST00000428445 IGHV3-64A0A075B6Q5 118 aa10.48□□□□□ -0.73
VARS-216ENST00000428445 DPH3P1Q9H4G8 78 aa10.48□□□□□ -0.73
VARS-216ENST00000428445 AP5S1Q9NUS5 200 aa10.48□□□□□ -0.73
VARS-216ENST00000428445 IFNA1P01562 189 aa10.47□□□□□ -0.73
VARS-216ENST00000428445 NTF3P20783 257 aa10.47□□□□□ -0.73
VARS-216ENST00000428445 PHOX2AO14813 284 aa10.46□□□□□ -0.73
VARS-216ENST00000428445 TAGLN2P37802 199 aaKnown RBP10.46□□□□□ -0.73
VARS-216ENST00000428445 MEF2BQ02080 365 aaPredicted RBP10.46□□□□□ -0.73
VARS-216ENST00000428445 CFAP161Q6P656 301 aa10.46□□□□□ -0.73
VARS-216ENST00000428445 LYZL1Q6UWQ5 148 aa10.46□□□□□ -0.73
VARS-216ENST00000428445 SPACA4Q8TDM5 124 aa10.46□□□□□ -0.73
VARS-216ENST00000428445 IGKV3OR2-268A0A0C4DH90 116 aa10.45□□□□□ -0.74
VARS-216ENST00000428445 UBE2L6O14933 153 aa10.45□□□□□ -0.74
VARS-216ENST00000428445 SULT1A2P50226 295 aa10.45□□□□□ -0.74
VARS-216ENST00000428445 COTL1Q14019 142 aa10.45□□□□□ -0.74
VARS-216ENST00000428445 MED9Q9NWA0 146 aa10.45□□□□□ -0.74
VARS-216ENST00000428445 RNF213Q63HN8 5207 aa10.45□□□□□ -0.74
VARS-216ENST00000428445 RAB19A4D1S5 217 aa10.44□□□□□ -0.74
VARS-216ENST00000428445 COX6A2Q02221 97 aa10.44□□□□□ -0.74
VARS-216ENST00000428445 CNFNQ9BYD5 112 aa10.44□□□□□ -0.74
VARS-216ENST00000428445 GAGE12HA6NDE8 117 aa10.43□□□□□ -0.74
VARS-216ENST00000428445 HIGD2BQ4VC39 106 aa10.43□□□□□ -0.74
VARS-216ENST00000428445 C15orf56Q8N910 161 aa10.43□□□□□ -0.74
VARS-216ENST00000428445 NUDT10Q8NFP7 164 aa10.43□□□□□ -0.74
VARS-216ENST00000428445 NUDT11Q96G61 164 aa10.43□□□□□ -0.74
VARS-216ENST00000428445 H7C423 109 aa10.42□□□□□ -0.74
VARS-216ENST00000428445 CTRLP40313 264 aa10.42□□□□□ -0.74
VARS-216ENST00000428445 TEX261Q6UWH6 196 aa10.42□□□□□ -0.74
VARS-216ENST00000428445 PRSS3P2Q8NHM4 247 aa10.42□□□□□ -0.74
VARS-216ENST00000428445 FAM210AQ96ND0 272 aa10.42□□□□□ -0.74
VARS-216ENST00000428445 PLAC8Q9NZF1 115 aa10.42□□□□□ -0.74
VARS-216ENST00000428445 TRBV20OR9-2A0A075B6H5 130 aa10.41□□□□□ -0.74
VARS-216ENST00000428445 IGKV2-24A0A0C4DH68 120 aa10.41□□□□□ -0.74
VARS-216ENST00000428445 NCR2O95944 276 aa10.41□□□□□ -0.74
VARS-216ENST00000428445 AMTP48728 403 aa10.41□□□□□ -0.74
VARS-216ENST00000428445 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
VARS-216ENST00000428445 GTSF1Q8WW33 167 aa10.41□□□□□ -0.74
VARS-216ENST00000428445 BCL2P10415 239 aa10.4□□□□□ -0.74
VARS-216ENST00000428445 TWIST1Q15672 202 aa10.4□□□□□ -0.74
VARS-216ENST00000428445 MAJINQ3KP22 176 aa10.4□□□□□ -0.74
VARS-216ENST00000428445 SMIM15Q7Z3B0 74 aa10.4□□□□□ -0.74
VARS-216ENST00000428445 TRAV26-2A0A0B4J265 109 aa10.39□□□□□ -0.75
VARS-216ENST00000428445 RPS10P46783 165 aaKnown RBP10.39□□□□□ -0.75
VARS-216ENST00000428445 SLC51BQ86UW2 128 aa10.39□□□□□ -0.75
VARS-216ENST00000428445 GATD1Q8NB37 220 aa10.38□□□□□ -0.75
VARS-216ENST00000428445 RPP21Q9H633 154 aaKnown RBP10.38□□□□□ -0.75
VARS-216ENST00000428445 STPG4Q8N801 248 aa10.37□□□□□ -0.75
VARS-216ENST00000428445 C7orf33Q8WU49 177 aa10.37□□□□□ -0.75
VARS-216ENST00000428445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.36□□□□□ -0.75
VARS-216ENST00000428445 IGKV2-29A2NJV5 120 aaPredicted RBP10.36□□□□□ -0.75
VARS-216ENST00000428445 NDUFS6O75380 124 aaKnown RBP10.36□□□□□ -0.75
VARS-216ENST00000428445 FOXA3P55318 350 aaPredicted RBP10.36□□□□□ -0.75
VARS-216ENST00000428445 AMMECR1LQ6DCA0 310 aa10.36□□□□□ -0.75
VARS-216ENST00000428445 Q6ZNX1 250 aa10.36□□□□□ -0.75
VARS-216ENST00000428445 OCC1Q8TAD7 63 aa10.36□□□□□ -0.75
VARS-216ENST00000428445 CHCHD10Q8WYQ3 142 aaPredicted RBP10.36□□□□□ -0.75
VARS-216ENST00000428445 RPL39LQ96EH5 51 aaKnown RBP10.36□□□□□ -0.75
VARS-216ENST00000428445 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
VARS-216ENST00000428445 LINC01600Q96MT4 127 aa10.36□□□□□ -0.75
VARS-216ENST00000428445 A0A096LNI7 61 aa10.35□□□□□ -0.75
VARS-216ENST00000428445 ZNF25P17030 456 aaPredicted RBP10.35□□□□□ -0.75
VARS-216ENST00000428445 PRR3P79522 188 aaKnown RBP10.35□□□□□ -0.75
VARS-216ENST00000428445 TCTE3Q8IZS6 198 aa10.35□□□□□ -0.75
VARS-216ENST00000428445 PKIGQ9Y2B9 76 aa10.35□□□□□ -0.75
VARS-216ENST00000428445 TMEM250H0YL14 139 aa10.34□□□□□ -0.75
VARS-216ENST00000428445 RNASE7Q9H1E1 156 aaKnown RBP10.34□□□□□ -0.75
VARS-216ENST00000428445 TRBV6-5A0A0K0K1A5 114 aa10.33□□□□□ -0.76
VARS-216ENST00000428445 A8MWL6 223 aa10.33□□□□□ -0.76
VARS-216ENST00000428445 APCSP02743 223 aa10.33□□□□□ -0.76
VARS-216ENST00000428445 RNASEKQ6P5S7 137 aaKnown RBP10.33□□□□□ -0.76
VARS-216ENST00000428445 FAM231DQ6ZW35 169 aa10.33□□□□□ -0.76
VARS-216ENST00000428445 LINC00474Q9P2X8 69 aa10.33□□□□□ -0.76
VARS-216ENST00000428445 GVQW2A0A096LPI5 108 aaPredicted RBP10.32□□□□□ -0.76
VARS-216ENST00000428445 SDHAF1A6NFY7 115 aa10.32□□□□□ -0.76
VARS-216ENST00000428445 I3L3M4 83 aa10.32□□□□□ -0.76
VARS-216ENST00000428445 K7EN84 100 aa10.32□□□□□ -0.76
VARS-216ENST00000428445 FGF6P10767 208 aa10.32□□□□□ -0.76
VARS-216ENST00000428445 FOXI1Q12951 378 aa10.32□□□□□ -0.76
VARS-216ENST00000428445 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
VARS-216ENST00000428445 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
VARS-216ENST00000428445 GATCO43716 136 aaKnown RBP10.31□□□□□ -0.76
VARS-216ENST00000428445 PMCHP20382 165 aa10.31□□□□□ -0.76
VARS-216ENST00000428445 CT83Q5H943 113 aa10.31□□□□□ -0.76
VARS-216ENST00000428445 TMEM101Q96IK0 257 aa10.31□□□□□ -0.76
VARS-216ENST00000428445 XCL1P47992 114 aa10.3□□□□□ -0.76
VARS-216ENST00000428445 KRTAP10-8P60410 259 aa10.3□□□□□ -0.76
VARS-216ENST00000428445 BLOC1S1P78537 153 aa10.3□□□□□ -0.76
VARS-216ENST00000428445 A0A0J9YXV3 536 aa10.29□□□□□ -0.76
VARS-216ENST00000428445 GAS8-AS1O95177 125 aa10.29□□□□□ -0.76
VARS-216ENST00000428445 FAM231BA6NCW3 169 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms