RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 GAGE1Q13065 139 aa12.44□□□□□ -0.42
PRDM5-203ENST00000428209 CHAC1Q9BUX1 264 aa12.44□□□□□ -0.42
PRDM5-203ENST00000428209 E9PLD3 99 aa12.43□□□□□ -0.42
PRDM5-203ENST00000428209 NOP10Q9NPE3 64 aaKnown RBP12.43□□□□□ -0.42
PRDM5-203ENST00000428209 ZNF479Q96JC4 524 aa12.43□□□□□ -0.42
PRDM5-203ENST00000428209 CSNK1G2-AS1Q8NCQ2 148 aa12.42□□□□□ -0.42
PRDM5-203ENST00000428209 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
PRDM5-203ENST00000428209 PHLDA1Q8WV24 401 aaPredicted RBP12.42□□□□□ -0.42
PRDM5-203ENST00000428209 C16orf74Q96GX8 76 aa12.42□□□□□ -0.42
PRDM5-203ENST00000428209 IGHV3-38A0A0C4DH36 116 aa12.41□□□□□ -0.42
PRDM5-203ENST00000428209 A6NDN8 102 aa12.41□□□□□ -0.42
PRDM5-203ENST00000428209 NPSP0C0P6 89 aa12.41□□□□□ -0.42
PRDM5-203ENST00000428209 VCX2Q9H322 139 aa12.41□□□□□ -0.42
PRDM5-203ENST00000428209 IGLV4-3A0A075B6K6 122 aa12.4□□□□□ -0.42
PRDM5-203ENST00000428209 DAZ2Q13117 558 aaKnown RBP12.4□□□□□ -0.42
PRDM5-203ENST00000428209 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
PRDM5-203ENST00000428209 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
PRDM5-203ENST00000428209 RRN3P1Q2M238 152 aa12.4□□□□□ -0.42
PRDM5-203ENST00000428209 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
PRDM5-203ENST00000428209 PYGO1Q9Y3Y4 419 aa12.4□□□□□ -0.42
PRDM5-203ENST00000428209 TRAV4A0A0B4J268 109 aa12.39□□□□□ -0.43
PRDM5-203ENST00000428209 GCSHP23434 173 aa12.39□□□□□ -0.43
PRDM5-203ENST00000428209 HERVK_113P61574 105 aa12.39□□□□□ -0.43
PRDM5-203ENST00000428209 PLAC8L1A1L4L8 177 aa12.39□□□□□ -0.43
PRDM5-203ENST00000428209 INSL3P51460 131 aa12.39□□□□□ -0.43
PRDM5-203ENST00000428209 COTL1Q14019 142 aa12.39□□□□□ -0.43
PRDM5-203ENST00000428209 CHCHD7Q9BUK0 85 aa12.39□□□□□ -0.43
PRDM5-203ENST00000428209 VWFP04275 2813 aa12.39□□□□□ -0.43
PRDM5-203ENST00000428209 SPATA3Q8NHX4 192 aa12.38□□□□□ -0.43
PRDM5-203ENST00000428209 C9orf66Q5T8R8 295 aa12.38□□□□□ -0.43
PRDM5-203ENST00000428209 CEMP1Q6PRD7 247 aaPredicted RBP12.38□□□□□ -0.43
PRDM5-203ENST00000428209 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.38□□□□□ -0.43
PRDM5-203ENST00000428209 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
PRDM5-203ENST00000428209 NFE4Q86UQ8 179 aa12.37□□□□□ -0.43
PRDM5-203ENST00000428209 TENM1Q9UKZ4 2725 aa12.37□□□□□ -0.43
PRDM5-203ENST00000428209 GAGE12BA1L429 117 aa12.37□□□□□ -0.43
PRDM5-203ENST00000428209 GAGE7O76087 117 aa12.37□□□□□ -0.43
PRDM5-203ENST00000428209 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
PRDM5-203ENST00000428209 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
PRDM5-203ENST00000428209 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
PRDM5-203ENST00000428209 VAMP3Q15836 100 aa12.37□□□□□ -0.43
PRDM5-203ENST00000428209 TRGV2A0A075B6R0 118 aa12.36□□□□□ -0.43
PRDM5-203ENST00000428209 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.36□□□□□ -0.43
PRDM5-203ENST00000428209 IGKV2-29A2NJV5 120 aaPredicted RBP12.36□□□□□ -0.43
PRDM5-203ENST00000428209 ZNF815PA8K554 130 aa12.36□□□□□ -0.43
PRDM5-203ENST00000428209 K7EQD1 137 aa12.36□□□□□ -0.43
PRDM5-203ENST00000428209 FXYD2P54710 66 aa12.36□□□□□ -0.43
PRDM5-203ENST00000428209 RPL36AP83881 106 aaKnown RBP12.36□□□□□ -0.43
PRDM5-203ENST00000428209 RPL36ALQ969Q0 106 aaKnown RBP12.36□□□□□ -0.43
PRDM5-203ENST00000428209 TRBV10-1A0A0K0K1A3 114 aa12.35□□□□□ -0.43
PRDM5-203ENST00000428209 H3BRM9 83 aa12.35□□□□□ -0.43
PRDM5-203ENST00000428209 K7EP13 123 aa12.35□□□□□ -0.43
PRDM5-203ENST00000428209 CEND1Q8N111 149 aa12.35□□□□□ -0.43
PRDM5-203ENST00000428209 SLC25A29Q8N8R3 303 aa12.35□□□□□ -0.43
PRDM5-203ENST00000428209 FAM104AQ969W3 186 aa12.35□□□□□ -0.43
PRDM5-203ENST00000428209 CITED1Q99966 193 aa12.35□□□□□ -0.43
PRDM5-203ENST00000428209 OVOL2Q9BRP0 275 aa12.35□□□□□ -0.43
PRDM5-203ENST00000428209 UBE2D4Q9Y2X8 147 aa12.35□□□□□ -0.43
PRDM5-203ENST00000428209 A0A0J9YXV3 536 aa12.34□□□□□ -0.43
PRDM5-203ENST00000428209 PTTG1IPP53801 180 aa12.34□□□□□ -0.43
PRDM5-203ENST00000428209 AMELXQ99217 191 aa12.34□□□□□ -0.43
PRDM5-203ENST00000428209 HIST1H4GQ99525 98 aa12.34□□□□□ -0.43
PRDM5-203ENST00000428209 SPANXA1Q9NS26 97 aa12.34□□□□□ -0.43
PRDM5-203ENST00000428209 UBE2V1Q13404 147 aa12.34□□□□□ -0.43
PRDM5-203ENST00000428209 TAL2Q16559 108 aa12.34□□□□□ -0.43
PRDM5-203ENST00000428209 TM2D2Q9BX73 214 aa12.34□□□□□ -0.43
PRDM5-203ENST00000428209 CRYBA4P53673 196 aa12.33□□□□□ -0.44
PRDM5-203ENST00000428209 RNASE13Q5GAN3 156 aaKnown RBP12.33□□□□□ -0.44
PRDM5-203ENST00000428209 ATRQ13535 2644 aa12.33□□□□□ -0.44
PRDM5-203ENST00000428209 F8P00451 2351 aa12.33□□□□□ -0.44
PRDM5-203ENST00000428209 SCGB1D4Q6XE38 83 aa12.33□□□□□ -0.44
PRDM5-203ENST00000428209 RAB37Q96AX2 223 aa12.32□□□□□ -0.44
PRDM5-203ENST00000428209 CCL25O15444 150 aa12.32□□□□□ -0.44
PRDM5-203ENST00000428209 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
PRDM5-203ENST00000428209 TMEM223A0PJW6 202 aa12.31□□□□□ -0.44
PRDM5-203ENST00000428209 GAGE12JA6NER3 117 aa12.31□□□□□ -0.44
PRDM5-203ENST00000428209 SMIM13P0DJ93 91 aa12.31□□□□□ -0.44
PRDM5-203ENST00000428209 ZNF22P17026 224 aaPredicted RBP12.31□□□□□ -0.44
PRDM5-203ENST00000428209 GAGE4Q13068 117 aa12.31□□□□□ -0.44
PRDM5-203ENST00000428209 GAGE5Q13069 117 aa12.31□□□□□ -0.44
PRDM5-203ENST00000428209 GAGE13Q4V321 117 aa12.31□□□□□ -0.44
PRDM5-203ENST00000428209 AMMECR1LQ6DCA0 310 aa12.31□□□□□ -0.44
PRDM5-203ENST00000428209 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
PRDM5-203ENST00000428209 PLEKHB2Q96CS7 222 aa12.31□□□□□ -0.44
PRDM5-203ENST00000428209 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
PRDM5-203ENST00000428209 C9orf118A6NHY6 69 aa12.3□□□□□ -0.44
PRDM5-203ENST00000428209 TSPEAR-AS2P59090 65 aa12.3□□□□□ -0.44
PRDM5-203ENST00000428209 J3QQQ9 107 aa12.29□□□□□ -0.44
PRDM5-203ENST00000428209 CIDEAO60543 219 aa12.29□□□□□ -0.44
PRDM5-203ENST00000428209 UBE2D3P61077 147 aa12.29□□□□□ -0.44
PRDM5-203ENST00000428209 UBE2D2P62837 147 aa12.29□□□□□ -0.44
PRDM5-203ENST00000428209 MRPS36P82909 103 aaKnown RBP12.29□□□□□ -0.44
PRDM5-203ENST00000428209 Q6ZUT4 128 aa12.29□□□□□ -0.44
PRDM5-203ENST00000428209 TRGV4A0A0C4DH28 118 aa12.29□□□□□ -0.44
PRDM5-203ENST00000428209 DGAT2L7PQ6IED9 249 aa12.29□□□□□ -0.44
PRDM5-203ENST00000428209 NHP2Q9NX24 153 aaKnown RBP12.29□□□□□ -0.44
PRDM5-203ENST00000428209 H3BUT2 72 aa12.28□□□□□ -0.44
PRDM5-203ENST00000428209 LGALS3P17931 250 aaKnown RBP12.28□□□□□ -0.44
PRDM5-203ENST00000428209 IGHV3-64A0A075B6Q5 118 aa12.28□□□□□ -0.44
PRDM5-203ENST00000428209 NAA38Q9BRA0 125 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms