RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
COL9A2-204ENST00000427563 TRGC1P0CF51 173 aa12.62□□□□□ -0.39
COL9A2-204ENST00000427563 HAMPP81172 84 aa12.62□□□□□ -0.39
COL9A2-204ENST00000427563 TWIST1Q15672 202 aa12.62□□□□□ -0.39
COL9A2-204ENST00000427563 Q8N976 141 aa12.62□□□□□ -0.39
COL9A2-204ENST00000427563 DPH3P1Q9H4G8 78 aa12.62□□□□□ -0.39
COL9A2-204ENST00000427563 IGKV2D-24A0A075B6R9 120 aa12.61□□□□□ -0.39
COL9A2-204ENST00000427563 TMEM262E9PQX1 116 aa12.61□□□□□ -0.39
COL9A2-204ENST00000427563 SNAPINO95295 136 aa12.61□□□□□ -0.39
COL9A2-204ENST00000427563 FAM30AQ9NZY2 134 aa12.61□□□□□ -0.39
COL9A2-204ENST00000427563 RASL11AQ6T310 242 aa12.6□□□□□ -0.39
COL9A2-204ENST00000427563 CHCHD5Q9BSY4 110 aa12.6□□□□□ -0.39
COL9A2-204ENST00000427563 RPS10P5Q9NQ39 176 aa12.6□□□□□ -0.39
COL9A2-204ENST00000427563 TMEM242Q9NWH2 141 aa12.6□□□□□ -0.39
COL9A2-204ENST00000427563 GAGE6Q13070 117 aa12.59□□□□□ -0.39
COL9A2-204ENST00000427563 RIGQ13278 110 aa12.59□□□□□ -0.39
COL9A2-204ENST00000427563 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
COL9A2-204ENST00000427563 DEFB104AQ8WTQ1 72 aa12.59□□□□□ -0.39
COL9A2-204ENST00000427563 IMMP2LQ96T52 175 aa12.59□□□□□ -0.39
COL9A2-204ENST00000427563 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.58□□□□□ -0.4
COL9A2-204ENST00000427563 RBX1P62877 108 aa12.58□□□□□ -0.4
COL9A2-204ENST00000427563 ELOBQ15370 118 aa12.58□□□□□ -0.4
COL9A2-204ENST00000427563 TMEM97Q5BJF2 176 aa12.58□□□□□ -0.4
COL9A2-204ENST00000427563 GATD1Q8NB37 220 aa12.58□□□□□ -0.4
COL9A2-204ENST00000427563 COX11Q9Y6N1 276 aa12.58□□□□□ -0.4
COL9A2-204ENST00000427563 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
COL9A2-204ENST00000427563 H7C1H1 209 aa12.57□□□□□ -0.4
COL9A2-204ENST00000427563 ANGP03950 147 aaKnown RBP12.57□□□□□ -0.4
COL9A2-204ENST00000427563 MRPL54Q6P161 138 aaKnown RBP12.57□□□□□ -0.4
COL9A2-204ENST00000427563 RMI2Q96E14 147 aa12.57□□□□□ -0.4
COL9A2-204ENST00000427563 NIT2Q9NQR4 276 aa12.57□□□□□ -0.4
COL9A2-204ENST00000427563 TRBV25-1A0A075B6N4 114 aa12.56□□□□□ -0.4
COL9A2-204ENST00000427563 A0A1B0GXF2 115 aa12.56□□□□□ -0.4
COL9A2-204ENST00000427563 KRTAP26-1Q6PEX3 210 aa12.56□□□□□ -0.4
COL9A2-204ENST00000427563 KCNIP4Q6PIL6 250 aa12.56□□□□□ -0.4
COL9A2-204ENST00000427563 SMIM15Q7Z3B0 74 aa12.56□□□□□ -0.4
COL9A2-204ENST00000427563 TMEM70Q9BUB7 260 aa12.56□□□□□ -0.4
COL9A2-204ENST00000427563 PRR34Q9NV39 138 aa12.56□□□□□ -0.4
COL9A2-204ENST00000427563 IGHV1-24A0A0C4DH33 117 aa12.55□□□□□ -0.4
COL9A2-204ENST00000427563 A0A1B0GW15 77 aa12.55□□□□□ -0.4
COL9A2-204ENST00000427563 Q0VG73 95 aa12.55□□□□□ -0.4
COL9A2-204ENST00000427563 LINC01620Q4KN68 170 aa12.55□□□□□ -0.4
COL9A2-204ENST00000427563 ATP5L2Q7Z4Y8 100 aa12.55□□□□□ -0.4
COL9A2-204ENST00000427563 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.55□□□□□ -0.4
COL9A2-204ENST00000427563 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
COL9A2-204ENST00000427563 SMR3BP02814 79 aaPredicted RBP12.54□□□□□ -0.4
COL9A2-204ENST00000427563 HBBP68871 147 aa12.54□□□□□ -0.4
COL9A2-204ENST00000427563 CLPSL2Q6UWE3 100 aa12.54□□□□□ -0.4
COL9A2-204ENST00000427563 BTF3L4Q96K17 158 aa12.54□□□□□ -0.4
COL9A2-204ENST00000427563 TRAV9-1A0A075B6T8 112 aa12.53□□□□□ -0.4
COL9A2-204ENST00000427563 S100PP25815 95 aa12.53□□□□□ -0.4
COL9A2-204ENST00000427563 CAMPP49913 170 aa12.53□□□□□ -0.4
COL9A2-204ENST00000427563 Q6ZSA8 131 aa12.53□□□□□ -0.4
COL9A2-204ENST00000427563 C20orf203Q8NBC4 194 aa12.53□□□□□ -0.4
COL9A2-204ENST00000427563 RPL39LQ96EH5 51 aaKnown RBP12.53□□□□□ -0.4
COL9A2-204ENST00000427563 C1orf43Q9BWL3 253 aa12.53□□□□□ -0.4
COL9A2-204ENST00000427563 IGLV4-60A0A075B6I1 120 aa12.52□□□□□ -0.41
COL9A2-204ENST00000427563 EPM2AB3EWF7 344 aa12.52□□□□□ -0.41
COL9A2-204ENST00000427563 GAS8-AS1O95177 125 aa12.52□□□□□ -0.41
COL9A2-204ENST00000427563 CRPP02741 224 aa12.52□□□□□ -0.41
COL9A2-204ENST00000427563 S100A8P05109 93 aa12.52□□□□□ -0.41
COL9A2-204ENST00000427563 PKIAP61925 76 aa12.52□□□□□ -0.41
COL9A2-204ENST00000427563 LINC00269Q8N2A0 174 aa12.52□□□□□ -0.41
COL9A2-204ENST00000427563 RNF185Q96GF1 192 aa12.52□□□□□ -0.41
COL9A2-204ENST00000427563 Q5VSD8 79 aa12.51□□□□□ -0.41
COL9A2-204ENST00000427563 AMN1Q8IY45 258 aa12.51□□□□□ -0.41
COL9A2-204ENST00000427563 TMEM243Q9BU79 118 aa12.51□□□□□ -0.41
COL9A2-204ENST00000427563 MIAQ16674 131 aa12.5□□□□□ -0.41
COL9A2-204ENST00000427563 HERC1Q15751 4861 aa12.5□□□□□ -0.41
COL9A2-204ENST00000427563 RAB4AP20338 218 aa12.49□□□□□ -0.41
COL9A2-204ENST00000427563 FAM104BQ5XKR9 115 aa12.49□□□□□ -0.41
COL9A2-204ENST00000427563 FRZBQ92765 325 aa12.49□□□□□ -0.41
COL9A2-204ENST00000427563 A0A1B0GUV1 79 aa12.48□□□□□ -0.41
COL9A2-204ENST00000427563 USP17L23D6RBM5 183 aa12.47□□□□□ -0.41
COL9A2-204ENST00000427563 HLA-DQA1P01909 254 aa12.47□□□□□ -0.41
COL9A2-204ENST00000427563 REG3AQ06141 175 aa12.47□□□□□ -0.41
COL9A2-204ENST00000427563 COTL1Q14019 142 aa12.47□□□□□ -0.41
COL9A2-204ENST00000427563 AMTP48728 403 aa12.46□□□□□ -0.41
COL9A2-204ENST00000427563 MRAP2Q96G30 205 aa12.46□□□□□ -0.41
COL9A2-204ENST00000427563 IGLV10-54A0A075B6I4 117 aa12.45□□□□□ -0.42
COL9A2-204ENST00000427563 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
COL9A2-204ENST00000427563 TRBV24-1A0A075B6N3 115 aa12.44□□□□□ -0.42
COL9A2-204ENST00000427563 TGIF2-C20orf24A0A0A6YYL0 155 aa12.44□□□□□ -0.42
COL9A2-204ENST00000427563 SDHAF1A6NFY7 115 aa12.44□□□□□ -0.42
COL9A2-204ENST00000427563 ATP6V1G1O75348 118 aa12.44□□□□□ -0.42
COL9A2-204ENST00000427563 PRSS1P07477 247 aa12.44□□□□□ -0.42
COL9A2-204ENST00000427563 RPS10P46783 165 aaKnown RBP12.44□□□□□ -0.42
COL9A2-204ENST00000427563 TMEM136Q6ZRR5 245 aa12.44□□□□□ -0.42
COL9A2-204ENST00000427563 CBLN2Q8IUK8 224 aa12.44□□□□□ -0.42
COL9A2-204ENST00000427563 YPEL4Q96NS1 127 aa12.44□□□□□ -0.42
COL9A2-204ENST00000427563 SMCO4Q9NRQ5 59 aa12.44□□□□□ -0.42
COL9A2-204ENST00000427563 TRBV6-5A0A0K0K1A5 114 aa12.43□□□□□ -0.42
COL9A2-204ENST00000427563 SMKR1H3BMG3 65 aa12.43□□□□□ -0.42
COL9A2-204ENST00000427563 SRRM2Q9UQ35 2752 aaKnown RBP12.43□□□□□ -0.42
COL9A2-204ENST00000427563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-204ENST00000427563 IGKV2-29A2NJV5 120 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-204ENST00000427563 NCR2O95944 276 aa12.42□□□□□ -0.42
COL9A2-204ENST00000427563 MYCBP2O75592 4640 aa12.42□□□□□ -0.42
COL9A2-204ENST00000427563 UBE2L6O14933 153 aa12.41□□□□□ -0.42
COL9A2-204ENST00000427563 INAFM2P0DMQ5 153 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms