RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CARHSP1Q9Y2V2 147 aaKnown RBP16.86■□□□□ 0.29
HERPUD2-205ENST00000427455 DEFB104AQ8WTQ1 72 aa16.85■□□□□ 0.29
HERPUD2-205ENST00000427455 IMMP2LQ96T52 175 aa16.85■□□□□ 0.29
HERPUD2-205ENST00000427455 TMEM70Q9BUB7 260 aa16.85■□□□□ 0.29
HERPUD2-205ENST00000427455 I3L3M4 83 aa16.84■□□□□ 0.29
HERPUD2-205ENST00000427455 ATRAIDQ6UW56 229 aa16.84■□□□□ 0.29
HERPUD2-205ENST00000427455 BTF3L4Q96K17 158 aa16.84■□□□□ 0.29
HERPUD2-205ENST00000427455 PSCAO43653 123 aa16.83■□□□□ 0.28
HERPUD2-205ENST00000427455 NRACQ8N912 160 aa16.83■□□□□ 0.28
HERPUD2-205ENST00000427455 APCSP02743 223 aa16.82■□□□□ 0.28
HERPUD2-205ENST00000427455 PMCHP20382 165 aa16.82■□□□□ 0.28
HERPUD2-205ENST00000427455 RBX1P62877 108 aa16.82■□□□□ 0.28
HERPUD2-205ENST00000427455 Q8N976 141 aa16.82■□□□□ 0.28
HERPUD2-205ENST00000427455 UBE2WQ96B02 151 aa16.82■□□□□ 0.28
HERPUD2-205ENST00000427455 TM2D2Q9BX73 214 aa16.82■□□□□ 0.28
HERPUD2-205ENST00000427455 DYNC1H1Q14204 4646 aaKnown RBP16.82■□□□□ 0.28
HERPUD2-205ENST00000427455 UBE2L6O14933 153 aa16.81■□□□□ 0.28
HERPUD2-205ENST00000427455 ANGP03950 147 aaKnown RBP16.81■□□□□ 0.28
HERPUD2-205ENST00000427455 CKS2P33552 79 aa16.81■□□□□ 0.28
HERPUD2-205ENST00000427455 POLR2KP53803 58 aaKnown RBP16.81■□□□□ 0.28
HERPUD2-205ENST00000427455 TRBV27A0A0K0K1C4 114 aa16.8■□□□□ 0.28
HERPUD2-205ENST00000427455 CRPP02741 224 aa16.8■□□□□ 0.28
HERPUD2-205ENST00000427455 SUMO2P61956 95 aaKnown RBP16.8■□□□□ 0.28
HERPUD2-205ENST00000427455 Q0VG73 95 aa16.8■□□□□ 0.28
HERPUD2-205ENST00000427455 RMI2Q96E14 147 aa16.8■□□□□ 0.28
HERPUD2-205ENST00000427455 EREGO14944 169 aa16.79■□□□□ 0.28
HERPUD2-205ENST00000427455 RHEBQ15382 184 aa16.79■□□□□ 0.28
HERPUD2-205ENST00000427455 A0A087WTM6 91 aa16.78■□□□□ 0.28
HERPUD2-205ENST00000427455 D6R8Y8 96 aa16.78■□□□□ 0.28
HERPUD2-205ENST00000427455 TSHBP01222 138 aa16.78■□□□□ 0.28
HERPUD2-205ENST00000427455 PPBPP02775 128 aa16.78■□□□□ 0.28
HERPUD2-205ENST00000427455 TMEM242Q9NWH2 141 aa16.78■□□□□ 0.28
HERPUD2-205ENST00000427455 COX11Q9Y6N1 276 aa16.78■□□□□ 0.28
HERPUD2-205ENST00000427455 TRBV24-1A0A075B6N3 115 aa16.77■□□□□ 0.28
HERPUD2-205ENST00000427455 TRAV9-1A0A075B6T8 112 aa16.77■□□□□ 0.28
HERPUD2-205ENST00000427455 A0A1B0GUV1 79 aa16.77■□□□□ 0.28
HERPUD2-205ENST00000427455 C7orf77A4D0Y5 90 aa16.77■□□□□ 0.28
HERPUD2-205ENST00000427455 CLRN3Q8NCR9 226 aa16.77■□□□□ 0.28
HERPUD2-205ENST00000427455 C20orf78Q9BR46 151 aa16.77■□□□□ 0.28
HERPUD2-205ENST00000427455 VCYO14598 125 aa16.76■□□□□ 0.27
HERPUD2-205ENST00000427455 ENHOQ6UWT2 76 aa16.76■□□□□ 0.27
HERPUD2-205ENST00000427455 SPATA12Q7Z6I5 190 aa16.76■□□□□ 0.27
HERPUD2-205ENST00000427455 IGKV2D-24A0A075B6R9 120 aa16.75■□□□□ 0.27
HERPUD2-205ENST00000427455 H7C423 109 aa16.75■□□□□ 0.27
HERPUD2-205ENST00000427455 TNFRSF6BO95407 300 aa16.75■□□□□ 0.27
HERPUD2-205ENST00000427455 S100PP25815 95 aa16.75■□□□□ 0.27
HERPUD2-205ENST00000427455 ORMDL3Q8N138 153 aa16.75■□□□□ 0.27
HERPUD2-205ENST00000427455 PRR34Q9NV39 138 aa16.75■□□□□ 0.27
HERPUD2-205ENST00000427455 PHOX2AO14813 284 aa16.74■□□□□ 0.27
HERPUD2-205ENST00000427455 RPL32P62910 135 aaKnown RBP16.74■□□□□ 0.27
HERPUD2-205ENST00000427455 MIAQ16674 131 aa16.74■□□□□ 0.27
HERPUD2-205ENST00000427455 NDUFA5Q16718 116 aa16.74■□□□□ 0.27
HERPUD2-205ENST00000427455 LINC00269Q8N2A0 174 aa16.74■□□□□ 0.27
HERPUD2-205ENST00000427455 C20orf203Q8NBC4 194 aa16.74■□□□□ 0.27
HERPUD2-205ENST00000427455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.73■□□□□ 0.27
HERPUD2-205ENST00000427455 IGKV2-29A2NJV5 120 aaPredicted RBP16.73■□□□□ 0.27
HERPUD2-205ENST00000427455 LRCOL1A6NCL2 159 aa16.73■□□□□ 0.27
HERPUD2-205ENST00000427455 KIR2DL4Q99706 377 aa16.73■□□□□ 0.27
HERPUD2-205ENST00000427455 RPS10P5Q9NQ39 176 aa16.73■□□□□ 0.27
HERPUD2-205ENST00000427455 IGLV4-60A0A075B6I1 120 aa16.72■□□□□ 0.27
HERPUD2-205ENST00000427455 APOC3P02656 99 aa16.72■□□□□ 0.27
HERPUD2-205ENST00000427455 ESDP10768 282 aa16.72■□□□□ 0.27
HERPUD2-205ENST00000427455 FCER1GP30273 86 aa16.72■□□□□ 0.27
HERPUD2-205ENST00000427455 KRTAP10-2P60368 255 aa16.72■□□□□ 0.27
HERPUD2-205ENST00000427455 AMMECR1LQ6DCA0 310 aa16.72■□□□□ 0.27
HERPUD2-205ENST00000427455 CLPSL2Q6UWE3 100 aa16.72■□□□□ 0.27
HERPUD2-205ENST00000427455 C1orf43Q9BWL3 253 aa16.72■□□□□ 0.27
HERPUD2-205ENST00000427455 DNAH5Q8TE73 4624 aa16.71■□□□□ 0.27
HERPUD2-205ENST00000427455 NPYP01303 97 aa16.71■□□□□ 0.27
HERPUD2-205ENST00000427455 TMEM136Q6ZRR5 245 aa16.71■□□□□ 0.27
HERPUD2-205ENST00000427455 REG3AQ06141 175 aa16.7■□□□□ 0.26
HERPUD2-205ENST00000427455 SVBPQ8N300 66 aa16.7■□□□□ 0.26
HERPUD2-205ENST00000427455 PRELID3AQ96N28 172 aa16.7■□□□□ 0.26
HERPUD2-205ENST00000427455 SMIM2Q9BVW6 85 aa16.7■□□□□ 0.26
HERPUD2-205ENST00000427455 C16orf90A8MZG2 172 aa16.69■□□□□ 0.26
HERPUD2-205ENST00000427455 FGF6P10767 208 aa16.69■□□□□ 0.26
HERPUD2-205ENST00000427455 LAMTOR2Q9Y2Q5 125 aa16.69■□□□□ 0.26
HERPUD2-205ENST00000427455 TCAPO15273 167 aa16.68■□□□□ 0.26
HERPUD2-205ENST00000427455 SNAPINO95295 136 aa16.68■□□□□ 0.26
HERPUD2-205ENST00000427455 ZNF25P17030 456 aaPredicted RBP16.68■□□□□ 0.26
HERPUD2-205ENST00000427455 RNASEKQ6P5S7 137 aaKnown RBP16.68■□□□□ 0.26
HERPUD2-205ENST00000427455 MAPKAPK5-AS1Q8N8E1 139 aa16.68■□□□□ 0.26
HERPUD2-205ENST00000427455 CDPF1Q6NVV7 123 aa16.66■□□□□ 0.26
HERPUD2-205ENST00000427455 PGPEP1Q9NXJ5 209 aa16.66■□□□□ 0.26
HERPUD2-205ENST00000427455 LRP1BQ9NZR2 4599 aa16.66■□□□□ 0.26
HERPUD2-205ENST00000427455 Q8N814 137 aa16.65■□□□□ 0.26
HERPUD2-205ENST00000427455 HLA-DQA1P01909 254 aa16.64■□□□□ 0.25
HERPUD2-205ENST00000427455 WFDC2Q14508 124 aa16.64■□□□□ 0.25
HERPUD2-205ENST00000427455 MRPL52Q86TS9 123 aaKnown RBP16.64■□□□□ 0.25
HERPUD2-205ENST00000427455 BAALCQ8WXS3 180 aa16.64■□□□□ 0.25
HERPUD2-205ENST00000427455 TMEM101Q96IK0 257 aa16.64■□□□□ 0.25
HERPUD2-205ENST00000427455 TRAV8-4A0A0B4J246 113 aa16.63■□□□□ 0.25
HERPUD2-205ENST00000427455 OR5A1Q8NGJ0 315 aa16.63■□□□□ 0.25
HERPUD2-205ENST00000427455 LECT2O14960 151 aa16.62■□□□□ 0.25
HERPUD2-205ENST00000427455 COX19Q49B96 90 aa16.62■□□□□ 0.25
HERPUD2-205ENST00000427455 NTN5Q8WTR8 489 aaPredicted RBP16.62■□□□□ 0.25
HERPUD2-205ENST00000427455 GNB1LQ9BYB4 327 aa16.62■□□□□ 0.25
HERPUD2-205ENST00000427455 MAP1LC3AQ9H492 121 aa16.62■□□□□ 0.25
HERPUD2-205ENST00000427455 IGLV10-54A0A075B6I4 117 aa16.61■□□□□ 0.25
HERPUD2-205ENST00000427455 SMAGPQ0VAQ4 97 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms