RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 FAM19A1Q7Z5A9 133 aa13.5□□□□□ -0.25
ARHGEF28-203ENST00000426542 DEFB131BA0A096LNP1 70 aa13.49□□□□□ -0.25
ARHGEF28-203ENST00000426542 IGF1P05019 195 aa13.49□□□□□ -0.25
ARHGEF28-203ENST00000426542 TRAV23DV6A0A075B6W5 121 aa13.49□□□□□ -0.25
ARHGEF28-203ENST00000426542 G3V4G9 280 aa13.49□□□□□ -0.25
ARHGEF28-203ENST00000426542 HILS1P60008 231 aa13.48□□□□□ -0.25
ARHGEF28-203ENST00000426542 K7EQG2 157 aa13.48□□□□□ -0.25
ARHGEF28-203ENST00000426542 GDF5OSQ5U4N7 250 aa13.48□□□□□ -0.25
ARHGEF28-203ENST00000426542 INAFM1C9JVW0 142 aa13.48□□□□□ -0.25
ARHGEF28-203ENST00000426542 C1orf229Q6ZS94 237 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF28-203ENST00000426542 SMIM9A6NGZ8 99 aa13.48□□□□□ -0.25
ARHGEF28-203ENST00000426542 NEXN-AS1Q8NBZ9 246 aa13.48□□□□□ -0.25
ARHGEF28-203ENST00000426542 IGLC6P0CF74 106 aa13.47□□□□□ -0.25
ARHGEF28-203ENST00000426542 LINC00574Q9H8X3 128 aa13.47□□□□□ -0.25
ARHGEF28-203ENST00000426542 TMEM131Q92545 1883 aa13.47□□□□□ -0.25
ARHGEF28-203ENST00000426542 A0A087WZ39 114 aa13.47□□□□□ -0.25
ARHGEF28-203ENST00000426542 BRWD1-AS2P59051 145 aa13.47□□□□□ -0.25
ARHGEF28-203ENST00000426542 SPATA12Q7Z6I5 190 aa13.47□□□□□ -0.25
ARHGEF28-203ENST00000426542 COL4A3Q01955 1670 aa13.46□□□□□ -0.25
ARHGEF28-203ENST00000426542 DENND4AQ7Z401 1863 aa13.46□□□□□ -0.26
ARHGEF28-203ENST00000426542 H7C423 109 aa13.45□□□□□ -0.26
ARHGEF28-203ENST00000426542 CDKN2A-AS1Q9UH64 79 aa13.45□□□□□ -0.26
ARHGEF28-203ENST00000426542 LINC00482Q8N8I6 264 aa13.45□□□□□ -0.26
ARHGEF28-203ENST00000426542 LINC00643Q86TS7 51 aa13.45□□□□□ -0.26
ARHGEF28-203ENST00000426542 SLPIP03973 132 aa13.44□□□□□ -0.26
ARHGEF28-203ENST00000426542 TMEM223A0PJW6 202 aa13.44□□□□□ -0.26
ARHGEF28-203ENST00000426542 C2orf16Q68DN1 1984 aa13.44□□□□□ -0.26
ARHGEF28-203ENST00000426542 PCNX2A6NKB5 2137 aa13.44□□□□□ -0.26
ARHGEF28-203ENST00000426542 FAM19A5Q7Z5A7 132 aaPredicted RBP13.43□□□□□ -0.26
ARHGEF28-203ENST00000426542 ZNF106Q9H2Y7 1883 aaKnown RBP13.43□□□□□ -0.26
ARHGEF28-203ENST00000426542 CFAP126Q5VTH2 177 aa13.43□□□□□ -0.26
ARHGEF28-203ENST00000426542 C22orf34Q6ZV56 151 aa13.43□□□□□ -0.26
ARHGEF28-203ENST00000426542 MED13LQ71F56 2210 aa13.43□□□□□ -0.26
ARHGEF28-203ENST00000426542 Q6ZPA2 131 aa13.43□□□□□ -0.26
ARHGEF28-203ENST00000426542 IGLV4-3A0A075B6K6 122 aa13.42□□□□□ -0.26
ARHGEF28-203ENST00000426542 CASC2Q6XLA1 102 aa13.42□□□□□ -0.26
ARHGEF28-203ENST00000426542 SCXQ7RTU7 201 aa13.42□□□□□ -0.26
ARHGEF28-203ENST00000426542 PLCE1Q9P212 2302 aa13.42□□□□□ -0.26
ARHGEF28-203ENST00000426542 ARHGAP21Q5T5U3 1957 aa13.42□□□□□ -0.26
ARHGEF28-203ENST00000426542 SDIM1Q6ZPB5 146 aa13.41□□□□□ -0.26
ARHGEF28-203ENST00000426542 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF28-203ENST00000426542 ZNF22P17026 224 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF28-203ENST00000426542 MLST8Q9BVC4 326 aa13.41□□□□□ -0.26
ARHGEF28-203ENST00000426542 TEX49A0A1B0GTD5 131 aa13.4□□□□□ -0.26
ARHGEF28-203ENST00000426542 PROK1P58294 105 aa13.4□□□□□ -0.26
ARHGEF28-203ENST00000426542 C10orf99Q6UWK7 81 aa13.4□□□□□ -0.26
ARHGEF28-203ENST00000426542 PIK3CD-AS1Q5SR53 167 aa13.4□□□□□ -0.26
ARHGEF28-203ENST00000426542 Q6ZSV7 163 aa13.4□□□□□ -0.26
ARHGEF28-203ENST00000426542 SVIPQ8NHG7 77 aa13.4□□□□□ -0.26
ARHGEF28-203ENST00000426542 TRBV6-8A0A0A6YYG3 113 aa13.4□□□□□ -0.26
ARHGEF28-203ENST00000426542 KIR2DL5BQ8NHK3 375 aa13.39□□□□□ -0.27
ARHGEF28-203ENST00000426542 ZFAND3Q9H8U3 227 aa13.39□□□□□ -0.27
ARHGEF28-203ENST00000426542 XAGE1AQ9HD64 81 aa13.39□□□□□ -0.27
ARHGEF28-203ENST00000426542 ZNF295-AS1Q8N0V1 137 aa13.38□□□□□ -0.27
ARHGEF28-203ENST00000426542 LINC00308Q8TCZ7 52 aa13.38□□□□□ -0.27
ARHGEF28-203ENST00000426542 EIF4EBP1Q13541 118 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF28-203ENST00000426542 DCANP1Q8TF63 244 aa13.38□□□□□ -0.27
ARHGEF28-203ENST00000426542 LY6LH3BQJ8 138 aa13.37□□□□□ -0.27
ARHGEF28-203ENST00000426542 M0QY20 66 aa13.37□□□□□ -0.27
ARHGEF28-203ENST00000426542 MIFP14174 115 aa13.37□□□□□ -0.27
ARHGEF28-203ENST00000426542 BRK1Q8WUW1 75 aa13.37□□□□□ -0.27
ARHGEF28-203ENST00000426542 IBA57-AS1B1ANH7 110 aa13.37□□□□□ -0.27
ARHGEF28-203ENST00000426542 CRIP1P50238 77 aa13.37□□□□□ -0.27
ARHGEF28-203ENST00000426542 USP17L23D6RBM5 183 aa13.36□□□□□ -0.27
ARHGEF28-203ENST00000426542 CREBBPQ92793 2442 aa13.36□□□□□ -0.27
ARHGEF28-203ENST00000426542 ENHOQ6UWT2 76 aa13.36□□□□□ -0.27
ARHGEF28-203ENST00000426542 KIAA1549LQ6ZVL6 1849 aa13.35□□□□□ -0.27
ARHGEF28-203ENST00000426542 WFDC10BQ8IUB3 73 aa13.35□□□□□ -0.27
ARHGEF28-203ENST00000426542 SPANXB1Q9NS25 103 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF28-203ENST00000426542 BBC3Q96PG8 261 aaPredicted RBP13.35□□□□□ -0.27
ARHGEF28-203ENST00000426542 TRBV6-4A0A1B0GX49 114 aa13.35□□□□□ -0.27
ARHGEF28-203ENST00000426542 Q8N976 141 aa13.35□□□□□ -0.27
ARHGEF28-203ENST00000426542 TP73-AS1Q9UF72 201 aa13.35□□□□□ -0.27
ARHGEF28-203ENST00000426542 SHISA2Q6UWI4 295 aa13.34□□□□□ -0.27
ARHGEF28-203ENST00000426542 EBI3Q14213 229 aa13.34□□□□□ -0.27
ARHGEF28-203ENST00000426542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF28-203ENST00000426542 RNF185Q96GF1 192 aa13.34□□□□□ -0.27
ARHGEF28-203ENST00000426542 CRIP3Q6Q6R5 217 aa13.34□□□□□ -0.27
ARHGEF28-203ENST00000426542 MAPKAPK5-AS1Q8N8E1 139 aa13.34□□□□□ -0.27
ARHGEF28-203ENST00000426542 C20orf197Q8N268 126 aa13.33□□□□□ -0.28
ARHGEF28-203ENST00000426542 FSTL3O95633 263 aa13.33□□□□□ -0.28
ARHGEF28-203ENST00000426542 SYCNQ0VAF6 134 aa13.33□□□□□ -0.28
ARHGEF28-203ENST00000426542 MPLKIPQ8TAP9 179 aa13.33□□□□□ -0.28
ARHGEF28-203ENST00000426542 C11orf71Q6IPW1 123 aa13.33□□□□□ -0.28
ARHGEF28-203ENST00000426542 TRIAP1O43715 76 aa13.32□□□□□ -0.28
ARHGEF28-203ENST00000426542 MT-ATP8P03928 68 aa13.32□□□□□ -0.28
ARHGEF28-203ENST00000426542 SPTSSBQ8NFR3 76 aa13.32□□□□□ -0.28
ARHGEF28-203ENST00000426542 MBD6Q96DN6 1003 aa13.32□□□□□ -0.28
ARHGEF28-203ENST00000426542 LY6G6DO95868 133 aa13.32□□□□□ -0.28
ARHGEF28-203ENST00000426542 TNCP24821 2201 aa13.31□□□□□ -0.28
ARHGEF28-203ENST00000426542 IGKV2-28A0A075B6P5 120 aa13.31□□□□□ -0.28
ARHGEF28-203ENST00000426542 IGKV2D-28P01615 120 aa13.31□□□□□ -0.28
ARHGEF28-203ENST00000426542 ZNF702PQ9H963 129 aa13.31□□□□□ -0.28
ARHGEF28-203ENST00000426542 IGLV2-18A0A075B6J9 118 aa13.31□□□□□ -0.28
ARHGEF28-203ENST00000426542 C1orf158Q8N1D5 194 aa13.31□□□□□ -0.28
ARHGEF28-203ENST00000426542 ZNF843Q8N446 348 aa13.31□□□□□ -0.28
ARHGEF28-203ENST00000426542 U3KQK5 164 aa13.31□□□□□ -0.28
ARHGEF28-203ENST00000426542 C6orf99Q4VX62 202 aa13.3□□□□□ -0.28
ARHGEF28-203ENST00000426542 TRAV10A0A0B4J240 114 aa13.3□□□□□ -0.28
ARHGEF28-203ENST00000426542 NDUFV3P56181 108 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms