RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TRBV6-1A0A0K0K1D8 114 aa12.05□□□□□ -0.48
PKP4-205ENST00000426248 TRBV10-2A0A0K0K1G8 114 aa12.05□□□□□ -0.48
PKP4-205ENST00000426248 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
PKP4-205ENST00000426248 PAPPA-AS1Q5QFB9 102 aa12.05□□□□□ -0.48
PKP4-205ENST00000426248 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
PKP4-205ENST00000426248 LGALS9O00182 355 aa12.04□□□□□ -0.48
PKP4-205ENST00000426248 RBAKDNA6NC62 111 aa12.04□□□□□ -0.48
PKP4-205ENST00000426248 M0R2P5 195 aa12.04□□□□□ -0.48
PKP4-205ENST00000426248 NSUN5P1Q3KNT7 163 aa12.04□□□□□ -0.48
PKP4-205ENST00000426248 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
PKP4-205ENST00000426248 Q6Q795 121 aa12.04□□□□□ -0.48
PKP4-205ENST00000426248 NEXN-AS1Q8NBZ9 246 aa12.04□□□□□ -0.48
PKP4-205ENST00000426248 RHPN1-AS1Q9BWJ2 59 aa12.03□□□□□ -0.48
PKP4-205ENST00000426248 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
PKP4-205ENST00000426248 IGHV3-33P01772 117 aa12.03□□□□□ -0.48
PKP4-205ENST00000426248 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
PKP4-205ENST00000426248 KNCNA6PVL3 124 aa12.02□□□□□ -0.48
PKP4-205ENST00000426248 RPL39P62891 51 aaKnown RBP12.02□□□□□ -0.48
PKP4-205ENST00000426248 SRSF2Q01130 221 aaKnown RBP12.02□□□□□ -0.48
PKP4-205ENST00000426248 BSNQ9UPA5 3926 aa12.02□□□□□ -0.49
PKP4-205ENST00000426248 Q6YL49 198 aa12.01□□□□□ -0.49
PKP4-205ENST00000426248 TEP1Q99973 2627 aaKnown RBP12.01□□□□□ -0.49
PKP4-205ENST00000426248 SLC50A1Q9BRV3 221 aa12.01□□□□□ -0.49
PKP4-205ENST00000426248 A0A087WWL8 130 aa12.01□□□□□ -0.49
PKP4-205ENST00000426248 CEMP1Q6PRD7 247 aaPredicted RBP12.01□□□□□ -0.49
PKP4-205ENST00000426248 C3orf22Q8N5N4 141 aa12.01□□□□□ -0.49
PKP4-205ENST00000426248 TOMM6Q96B49 74 aa12.01□□□□□ -0.49
PKP4-205ENST00000426248 TOMM7Q9P0U1 55 aa12.01□□□□□ -0.49
PKP4-205ENST00000426248 ELANEP08246 267 aa12□□□□□ -0.49
PKP4-205ENST00000426248 NRACQ8N912 160 aa12□□□□□ -0.49
PKP4-205ENST00000426248 TRAV13-1A0A0B4J241 112 aa12□□□□□ -0.49
PKP4-205ENST00000426248 hADV29S1A0JD25 119 aa12□□□□□ -0.49
PKP4-205ENST00000426248 CCDC140Q96MF4 163 aa12□□□□□ -0.49
PKP4-205ENST00000426248 LINC01619G3V211 115 aa12□□□□□ -0.49
PKP4-205ENST00000426248 TRIAP1O43715 76 aa12□□□□□ -0.49
PKP4-205ENST00000426248 SLC25A29Q8N8R3 303 aa12□□□□□ -0.49
PKP4-205ENST00000426248 DNAJC9-AS1A6NH13 148 aa11.99□□□□□ -0.49
PKP4-205ENST00000426248 HTN3P15516 51 aa11.99□□□□□ -0.49
PKP4-205ENST00000426248 DAZ1Q9NQZ3 744 aaKnown RBP11.99□□□□□ -0.49
PKP4-205ENST00000426248 IGHV3-53P01767 116 aa11.99□□□□□ -0.49
PKP4-205ENST00000426248 TRACP01848 142 aa11.99□□□□□ -0.49
PKP4-205ENST00000426248 F6UB75 175 aa11.99□□□□□ -0.49
PKP4-205ENST00000426248 DPH3P1Q9H4G8 78 aa11.99□□□□□ -0.49
PKP4-205ENST00000426248 MDFICQ9P1T7 246 aa11.99□□□□□ -0.49
PKP4-205ENST00000426248 PF4P02776 101 aa11.98□□□□□ -0.49
PKP4-205ENST00000426248 UNQ9165/PRO28630Q6UXU0 137 aa11.98□□□□□ -0.49
PKP4-205ENST00000426248 LINC01587Q99440 93 aa11.98□□□□□ -0.49
PKP4-205ENST00000426248 APCP25054 2843 aa11.98□□□□□ -0.49
PKP4-205ENST00000426248 IGLV2-18A0A075B6J9 118 aa11.98□□□□□ -0.49
PKP4-205ENST00000426248 UQCRQO14949 82 aa11.98□□□□□ -0.49
PKP4-205ENST00000426248 INAFM1C9JVW0 142 aa11.97□□□□□ -0.49
PKP4-205ENST00000426248 AGPAT4-IT1Q9H0P7 198 aa11.97□□□□□ -0.49
PKP4-205ENST00000426248 TSPEAR-AS2P59090 65 aa11.97□□□□□ -0.49
PKP4-205ENST00000426248 IGF1P05019 195 aa11.97□□□□□ -0.49
PKP4-205ENST00000426248 UBR5O95071 2799 aaPredicted RBP11.97□□□□□ -0.49
PKP4-205ENST00000426248 OPRPNQ99935 248 aaPredicted RBP11.96□□□□□ -0.49
PKP4-205ENST00000426248 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
PKP4-205ENST00000426248 F5H768 121 aa11.96□□□□□ -0.49
PKP4-205ENST00000426248 HRCT1Q6UXD1 115 aa11.96□□□□□ -0.49
PKP4-205ENST00000426248 LY6G6DO95868 133 aa11.96□□□□□ -0.5
PKP4-205ENST00000426248 SNRPD3P62318 126 aaKnown RBP11.96□□□□□ -0.5
PKP4-205ENST00000426248 C11orf21Q9P2W6 132 aa11.96□□□□□ -0.5
PKP4-205ENST00000426248 NDUFA4O00483 81 aa11.95□□□□□ -0.5
PKP4-205ENST00000426248 IGHG4P01861 327 aa11.95□□□□□ -0.5
PKP4-205ENST00000426248 SBSPONQ8IVN8 264 aa11.95□□□□□ -0.5
PKP4-205ENST00000426248 UBE2E2Q96LR5 201 aa11.95□□□□□ -0.5
PKP4-205ENST00000426248 ZNF625Q96I27 306 aaPredicted RBP11.95□□□□□ -0.5
PKP4-205ENST00000426248 TRAV12-2A0A075B6T6 113 aa11.94□□□□□ -0.5
PKP4-205ENST00000426248 Q6ZSV7 163 aa11.94□□□□□ -0.5
PKP4-205ENST00000426248 HOXD3P31249 432 aaPredicted RBP11.94□□□□□ -0.5
PKP4-205ENST00000426248 C1orf43Q9BWL3 253 aa11.94□□□□□ -0.5
PKP4-205ENST00000426248 H3BUA1 57 aa11.93□□□□□ -0.5
PKP4-205ENST00000426248 H7C423 109 aa11.93□□□□□ -0.5
PKP4-205ENST00000426248 SLURP1P55000 103 aa11.93□□□□□ -0.5
PKP4-205ENST00000426248 C11orf68Q9H3H3 251 aaKnown RBP11.93□□□□□ -0.5
PKP4-205ENST00000426248 BUB3O43684 328 aa11.93□□□□□ -0.5
PKP4-205ENST00000426248 PEMTQ9UBM1 199 aa11.93□□□□□ -0.5
PKP4-205ENST00000426248 TRAV25A0A0B4J276 109 aa11.92□□□□□ -0.5
PKP4-205ENST00000426248 DAND5Q8N907 189 aa11.92□□□□□ -0.5
PKP4-205ENST00000426248 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
PKP4-205ENST00000426248 DSCR8Q96T75 97 aa11.92□□□□□ -0.5
PKP4-205ENST00000426248 IGHV4OR15-8A0A075B7B6 117 aa11.92□□□□□ -0.5
PKP4-205ENST00000426248 A0A087WW49 117 aa11.92□□□□□ -0.5
PKP4-205ENST00000426248 RHOHQ15669 191 aa11.92□□□□□ -0.5
PKP4-205ENST00000426248 RNASE13Q5GAN3 156 aaKnown RBP11.91□□□□□ -0.5
PKP4-205ENST00000426248 IGHV3-16A0A0C4DH30 117 aa11.91□□□□□ -0.5
PKP4-205ENST00000426248 A0A1B0GX51 115 aa11.9□□□□□ -0.5
PKP4-205ENST00000426248 H3BT86 120 aa11.9□□□□□ -0.5
PKP4-205ENST00000426248 P0DMU3 169 aa11.9□□□□□ -0.5
PKP4-205ENST00000426248 FAM231AP0DMU4 169 aa11.9□□□□□ -0.5
PKP4-205ENST00000426248 FAM231CP0DMU5 169 aa11.9□□□□□ -0.5
PKP4-205ENST00000426248 RNF152Q8N8N0 203 aa11.9□□□□□ -0.5
PKP4-205ENST00000426248 IGKV3D-7A0A0C4DH55 119 aa11.9□□□□□ -0.5
PKP4-205ENST00000426248 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
PKP4-205ENST00000426248 PPP1R17O96001 155 aa11.9□□□□□ -0.5
PKP4-205ENST00000426248 HIST1H4AP62805 103 aaKnown RBP11.9□□□□□ -0.5
PKP4-205ENST00000426248 A0A096LNT2 108 aa11.89□□□□□ -0.51
PKP4-205ENST00000426248 IGHV7-4-1A0A0J9YVY3 117 aa11.89□□□□□ -0.51
PKP4-205ENST00000426248 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
PKP4-205ENST00000426248 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms