RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 NHLRC4P0CG21 123 aaPredicted RBP12.67□□□□□ -0.38
RARA-206ENST00000425707 NDUFV3P56181 108 aaKnown RBP12.67□□□□□ -0.38
RARA-206ENST00000425707 C19orf84I3L1E1 186 aa12.66□□□□□ -0.38
RARA-206ENST00000425707 IGKV3-20P01619 116 aa12.66□□□□□ -0.38
RARA-206ENST00000425707 GATA3P23771 443 aa12.66□□□□□ -0.38
RARA-206ENST00000425707 H7C423 109 aa12.66□□□□□ -0.38
RARA-206ENST00000425707 ADAMTSL4-AS1Q5T5F5 129 aa12.66□□□□□ -0.38
RARA-206ENST00000425707 C2orf82Q6UX34 121 aa12.66□□□□□ -0.38
RARA-206ENST00000425707 DNAJC30Q96LL9 226 aa12.66□□□□□ -0.38
RARA-206ENST00000425707 UBE2D4Q9Y2X8 147 aa12.66□□□□□ -0.38
RARA-206ENST00000425707 LST1O00453 97 aa12.65□□□□□ -0.38
RARA-206ENST00000425707 TMEM61Q8N0U2 210 aa12.65□□□□□ -0.38
RARA-206ENST00000425707 CHCHD7Q9BUK0 85 aa12.65□□□□□ -0.38
RARA-206ENST00000425707 CHD6Q8TD26 2715 aa12.65□□□□□ -0.38
RARA-206ENST00000425707 TEX49A0A1B0GTD5 131 aa12.65□□□□□ -0.38
RARA-206ENST00000425707 TRAV4A0A0B4J268 109 aa12.64□□□□□ -0.39
RARA-206ENST00000425707 PRRC2AP48634 2157 aaKnown RBP12.64□□□□□ -0.39
RARA-206ENST00000425707 HIVEP3Q5T1R4 2406 aa12.64□□□□□ -0.39
RARA-206ENST00000425707 IGLV5-45A0A087WSX0 123 aa12.64□□□□□ -0.39
RARA-206ENST00000425707 TRAV8-3A0A0A6YYJ7 113 aa12.64□□□□□ -0.39
RARA-206ENST00000425707 PRSS2P07478 247 aa12.64□□□□□ -0.39
RARA-206ENST00000425707 TIRAPP58753 221 aa12.64□□□□□ -0.39
RARA-206ENST00000425707 LINC00467Q9BRT7 94 aa12.64□□□□□ -0.39
RARA-206ENST00000425707 FLNCQ14315 2725 aa12.64□□□□□ -0.39
RARA-206ENST00000425707 CCL19Q99731 98 aa12.63□□□□□ -0.39
RARA-206ENST00000425707 TTC32Q5I0X7 151 aa12.62□□□□□ -0.39
RARA-206ENST00000425707 B4DSR2 109 aa12.62□□□□□ -0.39
RARA-206ENST00000425707 NDUFA1O15239 70 aa12.62□□□□□ -0.39
RARA-206ENST00000425707 BEX4Q9NWD9 120 aaPredicted RBP12.62□□□□□ -0.39
RARA-206ENST00000425707 ADARB2-AS1A8MUL3 147 aa12.62□□□□□ -0.39
RARA-206ENST00000425707 CRLF1O75462 422 aa12.62□□□□□ -0.39
RARA-206ENST00000425707 RBMY1A1P0DJD3 496 aaKnown RBP12.62□□□□□ -0.39
RARA-206ENST00000425707 RBMY1CP0DJD4 496 aa12.62□□□□□ -0.39
RARA-206ENST00000425707 RBMY1FQ15415 496 aaKnown RBP12.62□□□□□ -0.39
RARA-206ENST00000425707 TMEM95Q3KNT9 176 aa12.61□□□□□ -0.39
RARA-206ENST00000425707 ZNF415Q09FC8 603 aa12.61□□□□□ -0.39
RARA-206ENST00000425707 C15orf53Q8NAA6 179 aa12.61□□□□□ -0.39
RARA-206ENST00000425707 BBC3Q96PG8 261 aaPredicted RBP12.6□□□□□ -0.39
RARA-206ENST00000425707 IGHV4-30-2A0A087WSY4 118 aa12.6□□□□□ -0.39
RARA-206ENST00000425707 SYNJ2BPP57105 145 aa12.6□□□□□ -0.39
RARA-206ENST00000425707 PPDPFQ9H3Y8 114 aa12.6□□□□□ -0.39
RARA-206ENST00000425707 ASH1LQ9NR48 2969 aaKnown RBP12.6□□□□□ -0.39
RARA-206ENST00000425707 GAGE12JA6NER3 117 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 GAGE7O76087 117 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 GAGE12FP0CL80 117 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 GAGE12GP0CL81 117 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 GAGE12IP0CL82 117 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 GAGE4Q13068 117 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 COPS9Q8WXC6 57 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 IGHV3-53P01767 116 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 FAM19A3Q7Z5A8 133 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 UBE2E2Q96LR5 201 aa12.59□□□□□ -0.39
RARA-206ENST00000425707 CIRBPQ14011 172 aaKnown RBP12.58□□□□□ -0.4
RARA-206ENST00000425707 BEAN1Q3B7T3 259 aa12.58□□□□□ -0.4
RARA-206ENST00000425707 CEMP1Q6PRD7 247 aaPredicted RBP12.58□□□□□ -0.4
RARA-206ENST00000425707 AVPP01185 164 aa12.58□□□□□ -0.4
RARA-206ENST00000425707 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
RARA-206ENST00000425707 ATP5J2P56134 94 aa12.57□□□□□ -0.4
RARA-206ENST00000425707 PROK1P58294 105 aa12.57□□□□□ -0.4
RARA-206ENST00000425707 DOPEY2Q9Y3R5 2298 aa12.57□□□□□ -0.4
RARA-206ENST00000425707 ACYP1P07311 99 aa12.57□□□□□ -0.4
RARA-206ENST00000425707 HOXD3P31249 432 aaPredicted RBP12.57□□□□□ -0.4
RARA-206ENST00000425707 DSCR9P59020 149 aa12.57□□□□□ -0.4
RARA-206ENST00000425707 FAM208BQ5VWN6 2430 aa12.57□□□□□ -0.4
RARA-206ENST00000425707 IGHV4-59P01825 116 aa12.56□□□□□ -0.4
RARA-206ENST00000425707 AKAP6Q13023 2319 aa12.56□□□□□ -0.4
RARA-206ENST00000425707 IGLV5-39A0A0G2JS06 123 aa12.56□□□□□ -0.4
RARA-206ENST00000425707 TRBV7-7A0A0K0K1E9 115 aa12.56□□□□□ -0.4
RARA-206ENST00000425707 GNLYP22749 145 aa12.56□□□□□ -0.4
RARA-206ENST00000425707 C10orf99Q6UWK7 81 aa12.56□□□□□ -0.4
RARA-206ENST00000425707 DUX3Q96PT4 197 aa12.56□□□□□ -0.4
RARA-206ENST00000425707 IGHV3-73A0A0B4J1V6 119 aa12.55□□□□□ -0.4
RARA-206ENST00000425707 DEFB112Q30KQ8 113 aa12.55□□□□□ -0.4
RARA-206ENST00000425707 USP9XQ93008 2570 aaPredicted RBP12.55□□□□□ -0.4
RARA-206ENST00000425707 RS1O15537 224 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 Q6ZSN1 163 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 CLEC2BQ92478 149 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 TMEM101Q96IK0 257 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 LRRK2Q5S007 2527 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 SVEP1Q4LDE5 3571 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 J3QLI3 93 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 HERVK_113P63121 156 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 B5MCH6 92 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 RNASE13Q5GAN3 156 aaKnown RBP12.54□□□□□ -0.4
RARA-206ENST00000425707 C11orf72Q8NBR9 251 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 CDKN2A-AS1Q9UH64 79 aa12.54□□□□□ -0.4
RARA-206ENST00000425707 UTP20O75691 2785 aaKnown RBP12.53□□□□□ -0.4
RARA-206ENST00000425707 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.53□□□□□ -0.4
RARA-206ENST00000425707 IGKV2-29A2NJV5 120 aaPredicted RBP12.53□□□□□ -0.4
RARA-206ENST00000425707 KNCNA6PVL3 124 aa12.53□□□□□ -0.4
RARA-206ENST00000425707 DUX5Q96PT3 197 aa12.53□□□□□ -0.4
RARA-206ENST00000425707 CITED2Q99967 270 aaPredicted RBP12.53□□□□□ -0.4
RARA-206ENST00000425707 IMUPQ9GZP8 106 aa12.53□□□□□ -0.4
RARA-206ENST00000425707 RBMY1BA6NDE4 496 aaKnown RBP12.52□□□□□ -0.4
RARA-206ENST00000425707 RBMY1EA6NEQ0 496 aaKnown RBP12.52□□□□□ -0.4
RARA-206ENST00000425707 RBMY1DP0C7P1 496 aaKnown RBP12.52□□□□□ -0.4
RARA-206ENST00000425707 DEFB131AP59861 70 aa12.52□□□□□ -0.4
RARA-206ENST00000425707 LINC00308Q8TCZ7 52 aa12.52□□□□□ -0.4
RARA-206ENST00000425707 CSDC2Q9Y534 153 aaKnown RBP12.52□□□□□ -0.4
RARA-206ENST00000425707 A8MZ25 164 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms