RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 DEFB121Q5J5C9 76 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 TMEM170BQ5T4T1 132 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 MALRD1Q5VYJ5 2156 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 FAM104BQ5XKR9 115 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 LINC00322Q6ZN03 302 aaPredicted RBP0.7□□□□□ -2.3
PMS1-210ENST00000424307 LINC00643Q86TS7 51 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 NDUFA11Q86Y39 141 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 PDPNQ86YL7 162 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 TMEM61Q8N0U2 210 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 C20orf197Q8N268 126 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 C14orf178Q8N769 122 aaPredicted RBP0.7□□□□□ -2.3
PMS1-210ENST00000424307 CCL17Q92583 94 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 TIMM17AQ99595 171 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 ZNF355PQ9NSJ1 428 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 XCL2Q9UBD3 114 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 TIMM9Q9Y5J7 89 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 LY96Q9Y6Y9 160 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 SMG1Q96Q15 3661 aaKnown RBP0.7□□□□□ -2.3
PMS1-210ENST00000424307 TNCP24821 2201 aa0.7□□□□□ -2.3
PMS1-210ENST00000424307 PLCE1Q9P212 2302 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 LAMA5O15230 3695 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 TNRC18O15417 2968 aaPredicted RBP0.69□□□□□ -2.3
PMS1-210ENST00000424307 RELNP78509 3460 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 NBEAQ8NFP9 2946 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 CSMD1Q96PZ7 3565 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 ASCC3Q8N3C0 2202 aaKnown RBP0.69□□□□□ -2.3
PMS1-210ENST00000424307 TRBV19A0A075B6N1 114 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGHV1-45A0A0A0MS14 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 TRAV40A0A0B4J280 105 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGKV3D-7A0A0C4DH55 119 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGKV1-9A0A0C4DH69 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 LOC389332A0A1B0GUA5 103 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 TMEM30CPA0ZSE6 113 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 C17orf51A8MQB3 221 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 F8WEM9 126 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 M0R381 172 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 LST1O00453 97 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGKV1-39P01597 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 TFF1P04155 84 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGKV1D-39P04432 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IFI6P09912 130 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 NCBP2P52298 156 aaKnown RBP eCLIP0.69□□□□□ -2.31e-7■□□□□ 11
PMS1-210ENST00000424307 HBBP68871 147 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 ADIGQ0VDE8 80 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 ABCA11PQ4W5N1 156 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 SPANXN5Q5MJ07 72 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 C2orf82Q6UX34 121 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 ZNF818PQ6ZRF7 136 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 PRNTQ86SH4 94 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 RPRMLQ8N4K4 120 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 LINC00337Q8N6G1 96 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IFI27L1Q96BM0 104 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 RMI2Q96E14 147 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 ABHD14BQ96IU4 210 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 MGST2Q99735 147 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 SLC25A2Q9BXI2 301 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 NPCDR1Q9BY65 106 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 PSENENQ9NZ42 101 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 CNTRLQ7Z7A1 2325 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 PTPRQQ9UMZ3 2332 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 MUC22E2RYF6 1773 aaPredicted RBP0.69□□□□□ -2.3
PMS1-210ENST00000424307 COL18A1P39060 1754 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 ASPMQ8IZT6 3477 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 PRRC2BQ5JSZ5 2229 aaKnown RBP0.69□□□□□ -2.3
PMS1-210ENST00000424307 SDK1Q7Z5N4 2213 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGHV1OR15-1A0A075B7D0 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGHV1-69DA0A0B4J2H0 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 TRBV27A0A0K0K1C4 114 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 A6NN06 94 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IBA57-AS1B1ANH7 110 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 H7C2G1 150 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGHV3-30P01768 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGHV3-33P01772 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 HBDP02042 147 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGKV1-16P04430 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 HMGN2P05204 90 aaKnown RBP0.69□□□□□ -2.3
PMS1-210ENST00000424307 IGHV3-30-5P0DP03 117 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 CXCL8P10145 99 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 HMGA1P17096 107 aaKnown RBP0.69□□□□□ -2.3
PMS1-210ENST00000424307 LGALS3P17931 250 aaKnown RBP0.69□□□□□ -2.3
PMS1-210ENST00000424307 EDDM3BP56851 147 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 LINC00313P59037 77 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 KIAA0087Q14695 138 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 CLEC19AQ6UXS0 136 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 GPHB5Q86YW7 130 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 FAM216BQ8N7L0 139 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 SLC25A29Q8N8R3 303 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 C11orf72Q8NBR9 251 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 ITLN2Q8WWU7 325 aaPredicted RBP0.69□□□□□ -2.3
PMS1-210ENST00000424307 TXNDC17Q9BRA2 123 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 SPANXDQ9BXN6 97 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 MRPL35Q9NZE8 188 aaKnown RBP0.69□□□□□ -2.3
PMS1-210ENST00000424307 DPM3Q9P2X0 92 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 TAC3Q9UHF0 121 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 C22orf24Q9Y442 160 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 SNURFQ9Y675 71 aa0.69□□□□□ -2.3
PMS1-210ENST00000424307 SEC16AO15027 2179 aa0.68□□□□□ -2.3
PMS1-210ENST00000424307 URB1O60287 2271 aaKnown RBP0.68□□□□□ -2.3
PMS1-210ENST00000424307 ABCA4P78363 2273 aa0.68□□□□□ -2.3
PMS1-210ENST00000424307 MYO15AQ9UKN7 3530 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms