RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 UBE2L6O14933 153 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 CDK2AP2O75956 126 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 MPV17L2Q567V2 206 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 ATRAIDQ6UW56 229 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 NTM-AS1Q6ZSK4 140 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 GATD1Q8NB37 220 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 NTN5Q8WTR8 489 aaPredicted RBP7.3□□□□□ -1.24
USP49-204ENST00000423567 TMEM243Q9BU79 118 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 C1orf43Q9BWL3 253 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 TMEM191AQ9H0A3 160 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 PKHD1P08F94 4074 aa7.3□□□□□ -1.24
USP49-204ENST00000423567 IGLV5-52A0A0A0MRZ9 124 aa7.29□□□□□ -1.24
USP49-204ENST00000423567 LRCOL1A6NCL2 159 aa7.29□□□□□ -1.24
USP49-204ENST00000423567 AMTP48728 403 aa7.29□□□□□ -1.24
USP49-204ENST00000423567 NUP35Q8NFH5 326 aa7.29□□□□□ -1.24
USP49-204ENST00000423567 RBX1P62877 108 aa7.28□□□□□ -1.24
USP49-204ENST00000423567 Q8N814 137 aa7.28□□□□□ -1.24
USP49-204ENST00000423567 Q8N976 141 aa7.28□□□□□ -1.24
USP49-204ENST00000423567 RPL39LQ96EH5 51 aaKnown RBP7.28□□□□□ -1.24
USP49-204ENST00000423567 SDHAF1A6NFY7 115 aa7.27□□□□□ -1.25
USP49-204ENST00000423567 FUSP35637 526 aaKnown RBP eCLIP7.27□□□□□ -1.25
USP49-204ENST00000423567 MIAQ16674 131 aa7.27□□□□□ -1.25
USP49-204ENST00000423567 MRAP2Q96G30 205 aa7.27□□□□□ -1.25
USP49-204ENST00000423567 ST20Q9HBF5 79 aa7.27□□□□□ -1.25
USP49-204ENST00000423567 A0A1B0GW15 77 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 SMIM27A0A1W2PRY6 76 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 NCR2O95944 276 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 PPP1R17O96001 155 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 APCSP02743 223 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 S100A8P05109 93 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 GCSHP23434 173 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 CLLU1Q5K131 121 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 ENHOQ6UWT2 76 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 LINC00269Q8N2A0 174 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 DEFB104AQ8WTQ1 72 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 BAALCQ8WXS3 180 aa7.26□□□□□ -1.25
USP49-204ENST00000423567 TRBV6-5A0A0K0K1A5 114 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 A0A1B0GUV1 79 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 I3L3M4 83 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 LECT2O14960 151 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 PPP1R2P9O14990 202 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 RAB4AP20338 218 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 PMCHP20382 165 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 CAMPP49913 170 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 PNRC1Q12796 327 aaPredicted RBP7.25□□□□□ -1.25
USP49-204ENST00000423567 AMMECR1LQ6DCA0 310 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 CLPSL2Q6UWE3 100 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 AMN1Q8IY45 258 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 LRP1BQ9NZR2 4599 aa7.25□□□□□ -1.25
USP49-204ENST00000423567 HLA-DQA1P01909 254 aa7.24□□□□□ -1.25
USP49-204ENST00000423567 REG3AQ06141 175 aa7.24□□□□□ -1.25
USP49-204ENST00000423567 C14orf177Q52M58 125 aa7.24□□□□□ -1.25
USP49-204ENST00000423567 MAPKAPK5-AS1Q8N8E1 139 aa7.24□□□□□ -1.25
USP49-204ENST00000423567 RNF185Q96GF1 192 aa7.24□□□□□ -1.25
USP49-204ENST00000423567 PRR34Q9NV39 138 aa7.24□□□□□ -1.25
USP49-204ENST00000423567 RYR1P21817 5038 aa7.24□□□□□ -1.25
USP49-204ENST00000423567 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.23□□□□□ -1.25
USP49-204ENST00000423567 TRAV8-4A0A0B4J246 113 aa7.23□□□□□ -1.25
USP49-204ENST00000423567 F8W036 122 aa7.23□□□□□ -1.25
USP49-204ENST00000423567 H7C423 109 aa7.23□□□□□ -1.25
USP49-204ENST00000423567 MT-ND4LP03901 98 aa7.23□□□□□ -1.25
USP49-204ENST00000423567 KRTAP10-1P60331 282 aa7.23□□□□□ -1.25
USP49-204ENST00000423567 HBBP68871 147 aa7.23□□□□□ -1.25
USP49-204ENST00000423567 WFDC2Q14508 124 aa7.23□□□□□ -1.25
USP49-204ENST00000423567 RNASEKQ6P5S7 137 aaKnown RBP7.23□□□□□ -1.25
USP49-204ENST00000423567 TMEM70Q9BUB7 260 aa7.23□□□□□ -1.25
USP49-204ENST00000423567 FAM104BQ5XKR9 115 aa7.22□□□□□ -1.25
USP49-204ENST00000423567 MRPL54Q6P161 138 aaKnown RBP7.22□□□□□ -1.25
USP49-204ENST00000423567 C20orf203Q8NBC4 194 aa7.22□□□□□ -1.25
USP49-204ENST00000423567 ANAPC16Q96DE5 110 aa7.22□□□□□ -1.25
USP49-204ENST00000423567 BTF3L4Q96K17 158 aa7.22□□□□□ -1.25
USP49-204ENST00000423567 TMEM242Q9NWH2 141 aa7.22□□□□□ -1.25
USP49-204ENST00000423567 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.22□□□□□ -1.25
USP49-204ENST00000423567 DNAH5Q8TE73 4624 aa7.22□□□□□ -1.25
USP49-204ENST00000423567 IGLV4-60A0A075B6I1 120 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 IGLV10-54A0A075B6I4 117 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.21□□□□□ -1.26
USP49-204ENST00000423567 IGKV2-29A2NJV5 120 aaPredicted RBP7.21□□□□□ -1.26
USP49-204ENST00000423567 LINC00862A6NCI5 91 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 SMKR1H3BMG3 65 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 VCYO14598 125 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 GAS8-AS1O95177 125 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 FCER1GP30273 86 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 CKS2P33552 79 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 RPS10P46783 165 aaKnown RBP7.21□□□□□ -1.26
USP49-204ENST00000423567 SUMO2P61956 95 aaKnown RBP7.21□□□□□ -1.26
USP49-204ENST00000423567 MRPL51Q4U2R6 128 aaKnown RBP7.21□□□□□ -1.26
USP49-204ENST00000423567 UQCC3Q6UW78 93 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 ATP5L2Q7Z4Y8 100 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 TMEM101Q96IK0 257 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 KRTAP9-9Q9BYP9 154 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 KRTAP9-4Q9BYQ2 154 aa7.21□□□□□ -1.26
USP49-204ENST00000423567 TRBV27A0A0K0K1C4 114 aa7.2□□□□□ -1.26
USP49-204ENST00000423567 TSHBP01222 138 aa7.2□□□□□ -1.26
USP49-204ENST00000423567 FGF6P10767 208 aa7.2□□□□□ -1.26
USP49-204ENST00000423567 ZNF25P17030 456 aaPredicted RBP7.2□□□□□ -1.26
USP49-204ENST00000423567 POLR2KP53803 58 aaKnown RBP7.2□□□□□ -1.26
USP49-204ENST00000423567 IFITM2Q01629 132 aa7.2□□□□□ -1.26
USP49-204ENST00000423567 SMAGPQ0VAQ4 97 aa7.2□□□□□ -1.26
USP49-204ENST00000423567 KIR2DL4Q99706 377 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms