RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
MCF2L-214ENST00000423251 PKIAP61925 76 aa12.65□□□□□ -0.38
MCF2L-214ENST00000423251 COTL1Q14019 142 aa12.65□□□□□ -0.38
MCF2L-214ENST00000423251 RPS10P5Q9NQ39 176 aa12.65□□□□□ -0.38
MCF2L-214ENST00000423251 ABCA13Q86UQ4 5058 aa12.65□□□□□ -0.38
MCF2L-214ENST00000423251 A0A087WX48 190 aa12.64□□□□□ -0.39
MCF2L-214ENST00000423251 TMEM262E9PQX1 116 aa12.64□□□□□ -0.39
MCF2L-214ENST00000423251 S100PP25815 95 aa12.64□□□□□ -0.39
MCF2L-214ENST00000423251 CKS2P33552 79 aa12.64□□□□□ -0.39
MCF2L-214ENST00000423251 NFE4Q86UQ8 179 aa12.64□□□□□ -0.39
MCF2L-214ENST00000423251 NRACQ8N912 160 aa12.64□□□□□ -0.39
MCF2L-214ENST00000423251 CHCHD5Q9BSY4 110 aa12.64□□□□□ -0.39
MCF2L-214ENST00000423251 SMKR1H3BMG3 65 aa12.63□□□□□ -0.39
MCF2L-214ENST00000423251 I3L3M4 83 aa12.63□□□□□ -0.39
MCF2L-214ENST00000423251 NCR2O95944 276 aa12.63□□□□□ -0.39
MCF2L-214ENST00000423251 PPBPP02775 128 aa12.63□□□□□ -0.39
MCF2L-214ENST00000423251 PMCHP20382 165 aa12.63□□□□□ -0.39
MCF2L-214ENST00000423251 POLR2KP53803 58 aaKnown RBP12.63□□□□□ -0.39
MCF2L-214ENST00000423251 TMEM70Q9BUB7 260 aa12.63□□□□□ -0.39
MCF2L-214ENST00000423251 TRBV24-1A0A075B6N3 115 aa12.62□□□□□ -0.39
MCF2L-214ENST00000423251 LAGE3Q14657 143 aa12.62□□□□□ -0.39
MCF2L-214ENST00000423251 ELOBQ15370 118 aa12.62□□□□□ -0.39
MCF2L-214ENST00000423251 Q8N3U1 123 aa12.62□□□□□ -0.39
MCF2L-214ENST00000423251 TMEM243Q9BU79 118 aa12.62□□□□□ -0.39
MCF2L-214ENST00000423251 TRBV27A0A0K0K1C4 114 aa12.61□□□□□ -0.39
MCF2L-214ENST00000423251 VCYO14598 125 aa12.61□□□□□ -0.39
MCF2L-214ENST00000423251 C20orf78Q9BR46 151 aa12.61□□□□□ -0.39
MCF2L-214ENST00000423251 D6R8Y8 96 aa12.6□□□□□ -0.39
MCF2L-214ENST00000423251 PHOX2AO14813 284 aa12.6□□□□□ -0.39
MCF2L-214ENST00000423251 AMTP48728 403 aa12.6□□□□□ -0.39
MCF2L-214ENST00000423251 SUMO2P61956 95 aaKnown RBP12.6□□□□□ -0.39
MCF2L-214ENST00000423251 ATRAIDQ6UW56 229 aa12.6□□□□□ -0.39
MCF2L-214ENST00000423251 Q6ZRN7 208 aaPredicted RBP12.6□□□□□ -0.39
MCF2L-214ENST00000423251 DEFB104AQ8WTQ1 72 aa12.6□□□□□ -0.39
MCF2L-214ENST00000423251 TNFRSF6BO95407 300 aa12.59□□□□□ -0.39
MCF2L-214ENST00000423251 GAGE6Q13070 117 aa12.59□□□□□ -0.39
MCF2L-214ENST00000423251 ORMDL3Q8N138 153 aa12.59□□□□□ -0.39
MCF2L-214ENST00000423251 TRAV8-3A0A0A6YYJ7 113 aa12.58□□□□□ -0.4
MCF2L-214ENST00000423251 RPL32P62910 135 aaKnown RBP12.58□□□□□ -0.4
MCF2L-214ENST00000423251 MPV17L2Q567V2 206 aa12.58□□□□□ -0.4
MCF2L-214ENST00000423251 TMEM136Q6ZRR5 245 aa12.58□□□□□ -0.4
MCF2L-214ENST00000423251 A0A1B0GUV1 79 aa12.57□□□□□ -0.4
MCF2L-214ENST00000423251 TSHBP01222 138 aa12.57□□□□□ -0.4
MCF2L-214ENST00000423251 APCSP02743 223 aa12.57□□□□□ -0.4
MCF2L-214ENST00000423251 RBX1P62877 108 aa12.57□□□□□ -0.4
MCF2L-214ENST00000423251 KLK12Q9UKR0 248 aa12.57□□□□□ -0.4
MCF2L-214ENST00000423251 H7C423 109 aa12.56□□□□□ -0.4
MCF2L-214ENST00000423251 UBE2L6O14933 153 aa12.56□□□□□ -0.4
MCF2L-214ENST00000423251 TNP2Q05952 138 aa12.56□□□□□ -0.4
MCF2L-214ENST00000423251 COX19Q49B96 90 aa12.56□□□□□ -0.4
MCF2L-214ENST00000423251 PRELID3AQ96N28 172 aa12.56□□□□□ -0.4
MCF2L-214ENST00000423251 LAMTOR2Q9Y2Q5 125 aa12.56□□□□□ -0.4
MCF2L-214ENST00000423251 HSPG2P98160 4391 aa12.55□□□□□ -0.4
MCF2L-214ENST00000423251 NPYP01303 97 aa12.55□□□□□ -0.4
MCF2L-214ENST00000423251 Q0VG73 95 aa12.55□□□□□ -0.4
MCF2L-214ENST00000423251 Q8N976 141 aa12.55□□□□□ -0.4
MCF2L-214ENST00000423251 KIR2DL4Q99706 377 aa12.55□□□□□ -0.4
MCF2L-214ENST00000423251 GNB1LQ9BYB4 327 aa12.55□□□□□ -0.4
MCF2L-214ENST00000423251 ANGP03950 147 aaKnown RBP12.54□□□□□ -0.4
MCF2L-214ENST00000423251 ESDP10768 282 aa12.54□□□□□ -0.4
MCF2L-214ENST00000423251 Q9HAA7 133 aa12.54□□□□□ -0.4
MCF2L-214ENST00000423251 PRSS47A8MTI9 375 aa12.53□□□□□ -0.4
MCF2L-214ENST00000423251 TCAPO15273 167 aa12.53□□□□□ -0.4
MCF2L-214ENST00000423251 HLA-DQA1P01909 254 aa12.53□□□□□ -0.4
MCF2L-214ENST00000423251 FCER1GP30273 86 aa12.53□□□□□ -0.4
MCF2L-214ENST00000423251 UBE2WQ96B02 151 aa12.53□□□□□ -0.4
MCF2L-214ENST00000423251 TM2D2Q9BX73 214 aa12.53□□□□□ -0.4
MCF2L-214ENST00000423251 KRTAP4-5Q9BYR2 181 aa12.53□□□□□ -0.4
MCF2L-214ENST00000423251 ENHOQ6UWT2 76 aa12.52□□□□□ -0.41
MCF2L-214ENST00000423251 RMI2Q96E14 147 aa12.52□□□□□ -0.41
MCF2L-214ENST00000423251 SMIM2Q9BVW6 85 aa12.52□□□□□ -0.41
MCF2L-214ENST00000423251 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
MCF2L-214ENST00000423251 LRP1BQ9NZR2 4599 aa12.52□□□□□ -0.41
MCF2L-214ENST00000423251 C20orf203Q8NBC4 194 aa12.51□□□□□ -0.41
MCF2L-214ENST00000423251 PRR34Q9NV39 138 aa12.51□□□□□ -0.41
MCF2L-214ENST00000423251 IGLV4-60A0A075B6I1 120 aa12.5□□□□□ -0.41
MCF2L-214ENST00000423251 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-214ENST00000423251 IGKV2-29A2NJV5 120 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-214ENST00000423251 PSCAO43653 123 aa12.5□□□□□ -0.41
MCF2L-214ENST00000423251 MT-ND6P03923 174 aa12.5□□□□□ -0.41
MCF2L-214ENST00000423251 AMMECR1LQ6DCA0 310 aa12.5□□□□□ -0.41
MCF2L-214ENST00000423251 LINC00269Q8N2A0 174 aa12.5□□□□□ -0.41
MCF2L-214ENST00000423251 TGIF2-C20orf24A0A0A6YYL0 155 aa12.49□□□□□ -0.41
MCF2L-214ENST00000423251 CRPP02741 224 aa12.49□□□□□ -0.41
MCF2L-214ENST00000423251 FGF6P10767 208 aa12.49□□□□□ -0.41
MCF2L-214ENST00000423251 ZNF25P17030 456 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-214ENST00000423251 MIAQ16674 131 aa12.49□□□□□ -0.41
MCF2L-214ENST00000423251 MAP1LC3AQ9H492 121 aa12.49□□□□□ -0.41
MCF2L-214ENST00000423251 SMCO4Q9NRQ5 59 aa12.49□□□□□ -0.41
MCF2L-214ENST00000423251 REG3AQ06141 175 aa12.47□□□□□ -0.41
MCF2L-214ENST00000423251 KIAA1644Q3SXP7 199 aa12.47□□□□□ -0.41
MCF2L-214ENST00000423251 RNASEKQ6P5S7 137 aaKnown RBP12.47□□□□□ -0.41
MCF2L-214ENST00000423251 MRPL52Q86TS9 123 aaKnown RBP12.47□□□□□ -0.41
MCF2L-214ENST00000423251 IGKV2D-24A0A075B6R9 120 aa12.46□□□□□ -0.41
MCF2L-214ENST00000423251 LOC389332A0A1B0GUA5 103 aa12.46□□□□□ -0.41
MCF2L-214ENST00000423251 C16orf90A8MZG2 172 aa12.46□□□□□ -0.41
MCF2L-214ENST00000423251 EREGO14944 169 aa12.46□□□□□ -0.41
MCF2L-214ENST00000423251 RAB5AP20339 215 aa12.46□□□□□ -0.41
MCF2L-214ENST00000423251 SMAGPQ0VAQ4 97 aa12.46□□□□□ -0.41
MCF2L-214ENST00000423251 TMEM18Q96B42 140 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms