RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 REG3AQ06141 175 aa6.05□□□□□ -1.44
NUP50-206ENST00000422489 COTL1Q14019 142 aa6.05□□□□□ -1.44
NUP50-206ENST00000422489 SCXQ7RTU7 201 aa6.05□□□□□ -1.44
NUP50-206ENST00000422489 GATD1Q8NB37 220 aa6.05□□□□□ -1.44
NUP50-206ENST00000422489 PGLYRP4Q96LB8 373 aa6.05□□□□□ -1.44
NUP50-206ENST00000422489 CHAC1Q9BUX1 264 aa6.05□□□□□ -1.44
NUP50-206ENST00000422489 EIF5A2Q9GZV4 153 aaKnown RBP6.05□□□□□ -1.44
NUP50-206ENST00000422489 PRR34Q9NV39 138 aa6.05□□□□□ -1.44
NUP50-206ENST00000422489 IGLV4-60A0A075B6I1 120 aa6.04□□□□□ -1.44
NUP50-206ENST00000422489 PRSS1P07477 247 aa6.04□□□□□ -1.44
NUP50-206ENST00000422489 CTRLP40313 264 aa6.04□□□□□ -1.44
NUP50-206ENST00000422489 C20orf203Q8NBC4 194 aa6.04□□□□□ -1.44
NUP50-206ENST00000422489 CIRBP-AS1Q8TBR5 109 aa6.04□□□□□ -1.44
NUP50-206ENST00000422489 GTSF1Q8WW33 167 aa6.04□□□□□ -1.44
NUP50-206ENST00000422489 TRAV8-4A0A0B4J246 113 aa6.03□□□□□ -1.44
NUP50-206ENST00000422489 IGKV3OR2-268A0A0C4DH90 116 aa6.03□□□□□ -1.44
NUP50-206ENST00000422489 A8MWL6 223 aa6.03□□□□□ -1.44
NUP50-206ENST00000422489 TMEM250H0YL14 139 aa6.03□□□□□ -1.44
NUP50-206ENST00000422489 DGAT2L7PQ6IED9 249 aa6.03□□□□□ -1.44
NUP50-206ENST00000422489 RPL39LQ96EH5 51 aaKnown RBP6.03□□□□□ -1.44
NUP50-206ENST00000422489 DPH3Q96FX2 82 aa6.03□□□□□ -1.44
NUP50-206ENST00000422489 A0A1B0GUV1 79 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 hDV102S1A0JD36 115 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 PMCHP20382 165 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 XP32Q5T750 250 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 AMMECR1LQ6DCA0 310 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 RNASEKQ6P5S7 137 aaKnown RBP6.02□□□□□ -1.45
NUP50-206ENST00000422489 KRTAP26-1Q6PEX3 210 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 FAM231DQ6ZW35 169 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 BORCS7Q96B45 105 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 CNFNQ9BYD5 112 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 GFRA4Q9GZZ7 299 aa6.02□□□□□ -1.45
NUP50-206ENST00000422489 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
NUP50-206ENST00000422489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.01□□□□□ -1.45
NUP50-206ENST00000422489 IGKV2-29A2NJV5 120 aaPredicted RBP6.01□□□□□ -1.45
NUP50-206ENST00000422489 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
NUP50-206ENST00000422489 ZNF727A8MUV8 499 aa6.01□□□□□ -1.45
NUP50-206ENST00000422489 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
NUP50-206ENST00000422489 CLRN3Q8NCR9 226 aa6.01□□□□□ -1.45
NUP50-206ENST00000422489 SMIM7Q9BQ49 75 aa6.01□□□□□ -1.45
NUP50-206ENST00000422489 AP5S1Q9NUS5 200 aa6.01□□□□□ -1.45
NUP50-206ENST00000422489 FAT1Q14517 4588 aa6.01□□□□□ -1.45
NUP50-206ENST00000422489 A6NJY4 79 aa6□□□□□ -1.45
NUP50-206ENST00000422489 TEX261Q6UWH6 196 aa6□□□□□ -1.45
NUP50-206ENST00000422489 LYPD6BQ8NI32 183 aa6□□□□□ -1.45
NUP50-206ENST00000422489 SDHAF1A6NFY7 115 aa5.99□□□□□ -1.45
NUP50-206ENST00000422489 I3L3M4 83 aa5.99□□□□□ -1.45
NUP50-206ENST00000422489 NCR2O95944 276 aa5.99□□□□□ -1.45
NUP50-206ENST00000422489 APCSP02743 223 aa5.99□□□□□ -1.45
NUP50-206ENST00000422489 SRP19P09132 144 aaKnown RBP5.99□□□□□ -1.45
NUP50-206ENST00000422489 SDIM1Q6ZPB5 146 aa5.99□□□□□ -1.45
NUP50-206ENST00000422489 LINC01551Q86U37 167 aa5.99□□□□□ -1.45
NUP50-206ENST00000422489 FAM210AQ96ND0 272 aa5.99□□□□□ -1.45
NUP50-206ENST00000422489 VPS13BQ7Z7G8 4022 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.98□□□□□ -1.45
NUP50-206ENST00000422489 A0A1B0GUT8 65 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 A0A1B0GVG6 124 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 GAS8-AS1O95177 125 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 FGF6P10767 208 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 CT83Q5H943 113 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 CFAP161Q6P656 301 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 TSKUQ8WUA8 353 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 TMEM101Q96IK0 257 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 BTF3L4Q96K17 158 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 ST20Q9HBF5 79 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 OSTCQ9NRP0 149 aa5.98□□□□□ -1.45
NUP50-206ENST00000422489 IGHV3-64A0A075B6Q5 118 aa5.97□□□□□ -1.45
NUP50-206ENST00000422489 HIGD1CA8MV81 97 aa5.97□□□□□ -1.45
NUP50-206ENST00000422489 PANO1I0J062 215 aa5.97□□□□□ -1.45
NUP50-206ENST00000422489 RAB4AP20338 218 aa5.97□□□□□ -1.45
NUP50-206ENST00000422489 RPL37AP61513 92 aaKnown RBP5.97□□□□□ -1.45
NUP50-206ENST00000422489 RIGQ13278 110 aa5.97□□□□□ -1.45
NUP50-206ENST00000422489 TMEM241Q24JQ0 296 aa5.97□□□□□ -1.45
NUP50-206ENST00000422489 HIGD2BQ4VC39 106 aa5.97□□□□□ -1.45
NUP50-206ENST00000422489 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.97□□□□□ -1.45
NUP50-206ENST00000422489 DNAH8Q96JB1 4490 aa5.96□□□□□ -1.46
NUP50-206ENST00000422489 TRBV6-5A0A0K0K1A5 114 aa5.96□□□□□ -1.46
NUP50-206ENST00000422489 FAM231BA6NCW3 169 aa5.96□□□□□ -1.46
NUP50-206ENST00000422489 SMKR1H3BMG3 65 aa5.96□□□□□ -1.46
NUP50-206ENST00000422489 H7C423 109 aa5.96□□□□□ -1.46
NUP50-206ENST00000422489 SLPIP03973 132 aa5.96□□□□□ -1.46
NUP50-206ENST00000422489 CNBPP62633 177 aaKnown RBP5.96□□□□□ -1.46
NUP50-206ENST00000422489 AMN1Q8IY45 258 aa5.96□□□□□ -1.46
NUP50-206ENST00000422489 CHCHD10Q8WYQ3 142 aaPredicted RBP5.96□□□□□ -1.46
NUP50-206ENST00000422489 TMEM191AQ9H0A3 160 aa5.96□□□□□ -1.46
NUP50-206ENST00000422489 TMEM242Q9NWH2 141 aa5.96□□□□□ -1.46
NUP50-206ENST00000422489 KRTAP29-1A8MX34 341 aaPredicted RBP5.95□□□□□ -1.46
NUP50-206ENST00000422489 NDUFS6O75380 124 aaKnown RBP5.95□□□□□ -1.46
NUP50-206ENST00000422489 TSHBP01222 138 aa5.95□□□□□ -1.46
NUP50-206ENST00000422489 RPL23P62829 140 aaKnown RBP5.95□□□□□ -1.46
NUP50-206ENST00000422489 ADIRFQ15847 76 aa5.95□□□□□ -1.46
NUP50-206ENST00000422489 FAM74A3Q4VXF1 159 aa5.95□□□□□ -1.46
NUP50-206ENST00000422489 C15orf56Q8N910 161 aa5.95□□□□□ -1.46
NUP50-206ENST00000422489 NUP35Q8NFH5 326 aa5.95□□□□□ -1.46
NUP50-206ENST00000422489 OR5A1Q8NGJ0 315 aa5.95□□□□□ -1.46
NUP50-206ENST00000422489 MRAP2Q96G30 205 aa5.95□□□□□ -1.46
NUP50-206ENST00000422489 RNF185Q96GF1 192 aa5.95□□□□□ -1.46
NUP50-206ENST00000422489 V9GYV3 84 aa5.95□□□□□ -1.46
NUP50-206ENST00000422489 HERC1Q15751 4861 aa5.94□□□□□ -1.46
NUP50-206ENST00000422489 VCYO14598 125 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms