RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 TMEM243Q9BU79 118 aa12.13□□□□□ -0.47
VARS2-202ENST00000421263 IGLV10-54A0A075B6I4 117 aa12.12□□□□□ -0.47
VARS2-202ENST00000421263 BCL2P10415 239 aa12.12□□□□□ -0.47
VARS2-202ENST00000421263 CTRLP40313 264 aa12.12□□□□□ -0.47
VARS2-202ENST00000421263 RPL37AP61513 92 aaKnown RBP12.12□□□□□ -0.47
VARS2-202ENST00000421263 CNFNQ9BYD5 112 aa12.12□□□□□ -0.47
VARS2-202ENST00000421263 GFRA4Q9GZZ7 299 aa12.12□□□□□ -0.47
VARS2-202ENST00000421263 CIRBPQ14011 172 aaKnown RBP12.11□□□□□ -0.47
VARS2-202ENST00000421263 SERTAD4-AS1Q5TG53 156 aa12.11□□□□□ -0.47
VARS2-202ENST00000421263 SLPIP03973 132 aa12.09□□□□□ -0.47
VARS2-202ENST00000421263 HNRNPA3P51991 378 aaKnown RBP12.09□□□□□ -0.47
VARS2-202ENST00000421263 SLC51BQ86UW2 128 aa12.09□□□□□ -0.47
VARS2-202ENST00000421263 TCTE3Q8IZS6 198 aa12.09□□□□□ -0.47
VARS2-202ENST00000421263 TAGLN2P37802 199 aaKnown RBP12.08□□□□□ -0.48
VARS2-202ENST00000421263 COTL1Q14019 142 aa12.08□□□□□ -0.48
VARS2-202ENST00000421263 OCC1Q8TAD7 63 aa12.08□□□□□ -0.48
VARS2-202ENST00000421263 hDV102S1A0JD36 115 aa12.07□□□□□ -0.48
VARS2-202ENST00000421263 K7EN84 100 aa12.07□□□□□ -0.48
VARS2-202ENST00000421263 TWIST1Q15672 202 aa12.07□□□□□ -0.48
VARS2-202ENST00000421263 GATD1Q8NB37 220 aa12.07□□□□□ -0.48
VARS2-202ENST00000421263 RPP21Q9H633 154 aaKnown RBP12.07□□□□□ -0.48
VARS2-202ENST00000421263 AMTP48728 403 aa12.06□□□□□ -0.48
VARS2-202ENST00000421263 RNASE7Q9H1E1 156 aaKnown RBP12.06□□□□□ -0.48
VARS2-202ENST00000421263 UBE2L6O14933 153 aa12.05□□□□□ -0.48
VARS2-202ENST00000421263 IGHV3-64A0A075B6Q5 118 aa12.04□□□□□ -0.48
VARS2-202ENST00000421263 GTSF1Q8WW33 167 aa12.04□□□□□ -0.48
VARS2-202ENST00000421263 AP5S1Q9NUS5 200 aa12.04□□□□□ -0.48
VARS2-202ENST00000421263 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.03□□□□□ -0.48
VARS2-202ENST00000421263 TRAV26-2A0A0B4J265 109 aa12.03□□□□□ -0.48
VARS2-202ENST00000421263 RNF185Q96GF1 192 aa12.03□□□□□ -0.48
VARS2-202ENST00000421263 UBR4Q5T4S7 5183 aa12.03□□□□□ -0.48
VARS2-202ENST00000421263 NCR2O95944 276 aa12.02□□□□□ -0.49
VARS2-202ENST00000421263 C15orf56Q8N910 161 aa12.02□□□□□ -0.49
VARS2-202ENST00000421263 H7C423 109 aa12.01□□□□□ -0.49
VARS2-202ENST00000421263 FOXA3P55318 350 aaPredicted RBP12.01□□□□□ -0.49
VARS2-202ENST00000421263 Q6ZNX1 250 aa12.01□□□□□ -0.49
VARS2-202ENST00000421263 RPL39LQ96EH5 51 aaKnown RBP12.01□□□□□ -0.49
VARS2-202ENST00000421263 A0A087WYN8 130 aa12□□□□□ -0.49
VARS2-202ENST00000421263 GAGE12HA6NDE8 117 aa12□□□□□ -0.49
VARS2-202ENST00000421263 TMEM250H0YL14 139 aa12□□□□□ -0.49
VARS2-202ENST00000421263 CFAP161Q6P656 301 aa12□□□□□ -0.49
VARS2-202ENST00000421263 TEX261Q6UWH6 196 aa12□□□□□ -0.49
VARS2-202ENST00000421263 FAM231DQ6ZW35 169 aa12□□□□□ -0.49
VARS2-202ENST00000421263 SPACA4Q8TDM5 124 aa12□□□□□ -0.49
VARS2-202ENST00000421263 Q6ZRU5 148 aa11.99□□□□□ -0.49
VARS2-202ENST00000421263 LYPD6BQ8NI32 183 aa11.99□□□□□ -0.49
VARS2-202ENST00000421263 CHTF8P0CG12 524 aa11.98□□□□□ -0.49
VARS2-202ENST00000421263 SMIM15Q7Z3B0 74 aa11.98□□□□□ -0.49
VARS2-202ENST00000421263 DPH3Q96FX2 82 aa11.98□□□□□ -0.49
VARS2-202ENST00000421263 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
VARS2-202ENST00000421263 SDHAF1A6NFY7 115 aa11.97□□□□□ -0.49
VARS2-202ENST00000421263 A8MWL6 223 aa11.97□□□□□ -0.49
VARS2-202ENST00000421263 GATCO43716 136 aaKnown RBP11.97□□□□□ -0.49
VARS2-202ENST00000421263 MT1HL1P0DM35 61 aa11.97□□□□□ -0.49
VARS2-202ENST00000421263 AMMECR1LQ6DCA0 310 aa11.97□□□□□ -0.49
VARS2-202ENST00000421263 CHCHD10Q8WYQ3 142 aaPredicted RBP11.97□□□□□ -0.49
VARS2-202ENST00000421263 PLAC8Q9NZF1 115 aa11.97□□□□□ -0.49
VARS2-202ENST00000421263 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.49
VARS2-202ENST00000421263 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.49
VARS2-202ENST00000421263 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.49
VARS2-202ENST00000421263 FAM231BA6NCW3 169 aa11.96□□□□□ -0.49
VARS2-202ENST00000421263 APCSP02743 223 aa11.96□□□□□ -0.49
VARS2-202ENST00000421263 FGF6P10767 208 aa11.96□□□□□ -0.49
VARS2-202ENST00000421263 RPS10P46783 165 aaKnown RBP11.96□□□□□ -0.49
VARS2-202ENST00000421263 BLOC1S1P78537 153 aa11.96□□□□□ -0.49
VARS2-202ENST00000421263 COX6A2Q02221 97 aa11.95□□□□□ -0.5
VARS2-202ENST00000421263 CT83Q5H943 113 aa11.95□□□□□ -0.5
VARS2-202ENST00000421263 RNASEKQ6P5S7 137 aaKnown RBP11.95□□□□□ -0.5
VARS2-202ENST00000421263 I3L3M4 83 aa11.94□□□□□ -0.5
VARS2-202ENST00000421263 ESDP10768 282 aa11.94□□□□□ -0.5
VARS2-202ENST00000421263 ZNF25P17030 456 aaPredicted RBP11.94□□□□□ -0.5
VARS2-202ENST00000421263 OR5A1Q8NGJ0 315 aa11.94□□□□□ -0.5
VARS2-202ENST00000421263 FAM210AQ96ND0 272 aa11.94□□□□□ -0.5
VARS2-202ENST00000421263 PLA2G2DQ9UNK4 145 aa11.94□□□□□ -0.5
VARS2-202ENST00000421263 GVQW2A0A096LPI5 108 aaPredicted RBP11.93□□□□□ -0.5
VARS2-202ENST00000421263 NDUFS6O75380 124 aaKnown RBP11.93□□□□□ -0.5
VARS2-202ENST00000421263 PMCHP20382 165 aa11.93□□□□□ -0.5
VARS2-202ENST00000421263 FOXI1Q12951 378 aa11.93□□□□□ -0.5
VARS2-202ENST00000421263 HIGD2BQ4VC39 106 aa11.93□□□□□ -0.5
VARS2-202ENST00000421263 PRSS3P2Q8NHM4 247 aa11.93□□□□□ -0.5
VARS2-202ENST00000421263 GAS8-AS1O95177 125 aa11.92□□□□□ -0.5
VARS2-202ENST00000421263 ALKAL2Q6UX46 152 aa11.92□□□□□ -0.5
VARS2-202ENST00000421263 AKAP14Q86UN6 197 aa11.92□□□□□ -0.5
VARS2-202ENST00000421263 POLR2KP53803 58 aaKnown RBP11.91□□□□□ -0.5
VARS2-202ENST00000421263 TMEM191AQ9H0A3 160 aa11.91□□□□□ -0.5
VARS2-202ENST00000421263 LINC00959A0A1B0GUT2 108 aa11.9□□□□□ -0.5
VARS2-202ENST00000421263 PHOX2AO14813 284 aa11.9□□□□□ -0.5
VARS2-202ENST00000421263 TSHBP01222 138 aa11.9□□□□□ -0.5
VARS2-202ENST00000421263 RAB4AP20338 218 aa11.89□□□□□ -0.51
VARS2-202ENST00000421263 LINC01551Q86U37 167 aa11.89□□□□□ -0.51
VARS2-202ENST00000421263 TSKUQ8WUA8 353 aa11.89□□□□□ -0.51
VARS2-202ENST00000421263 BTF3L4Q96K17 158 aa11.89□□□□□ -0.51
VARS2-202ENST00000421263 ST20Q9HBF5 79 aa11.89□□□□□ -0.51
VARS2-202ENST00000421263 TNXBP22105 4242 aa11.89□□□□□ -0.51
VARS2-202ENST00000421263 TRBV27A0A0K0K1C4 114 aa11.88□□□□□ -0.51
VARS2-202ENST00000421263 A0A1B0GUT8 65 aa11.88□□□□□ -0.51
VARS2-202ENST00000421263 HIGD1CA8MV81 97 aa11.88□□□□□ -0.51
VARS2-202ENST00000421263 MAJINQ3KP22 176 aa11.88□□□□□ -0.51
VARS2-202ENST00000421263 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
VARS2-202ENST00000421263 BORCS7Q96B45 105 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms