RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 C9JQL5 133 aa8.12□□□□□ -1.11
LINC00339-203ENST00000420503 K7EN84 100 aa8.12□□□□□ -1.11
LINC00339-203ENST00000420503 CXCL1P09341 107 aa8.12□□□□□ -1.11
LINC00339-203ENST00000420503 CNBPP62633 177 aaKnown RBP8.12□□□□□ -1.11
LINC00339-203ENST00000420503 REG3AQ06141 175 aa8.12□□□□□ -1.11
LINC00339-203ENST00000420503 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
LINC00339-203ENST00000420503 SNAI2O43623 268 aa8.11□□□□□ -1.11
LINC00339-203ENST00000420503 CLLU1Q5K131 121 aa8.11□□□□□ -1.11
LINC00339-203ENST00000420503 SMDT1Q9H4I9 107 aa8.11□□□□□ -1.11
LINC00339-203ENST00000420503 GZMBP10144 247 aa8.1□□□□□ -1.11
LINC00339-203ENST00000420503 DPH3Q96FX2 82 aa8.1□□□□□ -1.11
LINC00339-203ENST00000420503 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
LINC00339-203ENST00000420503 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 CEBPGP53567 150 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 PEA15Q15121 130 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 IQCJQ1A5X6 159 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 SPANXN1Q5VSR9 72 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 C15orf56Q8N910 161 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 NUDT10Q8NFP7 164 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 NUDT11Q96G61 164 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 SMIM7Q9BQ49 75 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 BIN3Q9NQY0 253 aa8.09□□□□□ -1.11
LINC00339-203ENST00000420503 IGHV3-64A0A075B6Q5 118 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 ZNF727A8MUV8 499 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 M0QY20 66 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 MGPP08493 103 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 OR5AL1P0C617 328 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 RAB14P61106 215 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 COX6A2Q02221 97 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 HIGD2BQ4VC39 106 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 SUMO4Q6EEV6 95 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 LINC01551Q86U37 167 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 CLRN3Q8NCR9 226 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 PRSS3P2Q8NHM4 247 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 RNASE7Q9H1E1 156 aaKnown RBP8.08□□□□□ -1.12
LINC00339-203ENST00000420503 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
LINC00339-203ENST00000420503 IGHV1-24A0A0C4DH33 117 aa8.07□□□□□ -1.12
LINC00339-203ENST00000420503 IGKV2-24A0A0C4DH68 120 aa8.07□□□□□ -1.12
LINC00339-203ENST00000420503 P01737 135 aa8.07□□□□□ -1.12
LINC00339-203ENST00000420503 IGLC6P0CF74 106 aa8.07□□□□□ -1.12
LINC00339-203ENST00000420503 PRR3P79522 188 aaKnown RBP8.07□□□□□ -1.12
LINC00339-203ENST00000420503 FAM74A3Q4VXF1 159 aa8.07□□□□□ -1.12
LINC00339-203ENST00000420503 FAM231DQ6ZW35 169 aa8.07□□□□□ -1.12
LINC00339-203ENST00000420503 OR2D3Q8NGH3 330 aa8.07□□□□□ -1.12
LINC00339-203ENST00000420503 LPAP08519 4548 aa8.06□□□□□ -1.12
LINC00339-203ENST00000420503 IGKV3OR2-268A0A0C4DH90 116 aa8.06□□□□□ -1.12
LINC00339-203ENST00000420503 RPS20P60866 119 aaKnown RBP8.06□□□□□ -1.12
LINC00339-203ENST00000420503 PKIAP61925 76 aa8.06□□□□□ -1.12
LINC00339-203ENST00000420503 GTSF1Q8WW33 167 aa8.06□□□□□ -1.12
LINC00339-203ENST00000420503 LINC01600Q96MT4 127 aa8.06□□□□□ -1.12
LINC00339-203ENST00000420503 GAGE12HA6NDE8 117 aa8.05□□□□□ -1.12
LINC00339-203ENST00000420503 MAJINQ3KP22 176 aa8.05□□□□□ -1.12
LINC00339-203ENST00000420503 AP1S3Q96PC3 154 aa8.05□□□□□ -1.12
LINC00339-203ENST00000420503 TPPP3Q9BW30 176 aa8.05□□□□□ -1.12
LINC00339-203ENST00000420503 RPP21Q9H633 154 aaKnown RBP8.05□□□□□ -1.12
LINC00339-203ENST00000420503 XKRY2A2RUG3 117 aa8.04□□□□□ -1.12
LINC00339-203ENST00000420503 RPL23P62829 140 aaKnown RBP8.04□□□□□ -1.12
LINC00339-203ENST00000420503 TMEM241Q24JQ0 296 aa8.04□□□□□ -1.12
LINC00339-203ENST00000420503 TMEM97Q5BJF2 176 aa8.04□□□□□ -1.12
LINC00339-203ENST00000420503 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.04□□□□□ -1.12
LINC00339-203ENST00000420503 FER1L6-AS1Q8NA97 138 aa8.04□□□□□ -1.12
LINC00339-203ENST00000420503 ISOC2Q96AB3 205 aa8.04□□□□□ -1.12
LINC00339-203ENST00000420503 TMEM243Q9BU79 118 aa8.04□□□□□ -1.12
LINC00339-203ENST00000420503 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
LINC00339-203ENST00000420503 NAT8Q9UHE5 227 aa8.04□□□□□ -1.12
LINC00339-203ENST00000420503 A0A096LNI7 61 aa8.03□□□□□ -1.12
LINC00339-203ENST00000420503 SMIM17P0DL12 118 aa8.03□□□□□ -1.12
LINC00339-203ENST00000420503 CTRLP40313 264 aa8.03□□□□□ -1.12
LINC00339-203ENST00000420503 CT83Q5H943 113 aa8.03□□□□□ -1.12
LINC00339-203ENST00000420503 LINC00526Q96FQ7 95 aa8.03□□□□□ -1.12
LINC00339-203ENST00000420503 RNF185Q96GF1 192 aa8.03□□□□□ -1.12
LINC00339-203ENST00000420503 CNFNQ9BYD5 112 aa8.03□□□□□ -1.12
LINC00339-203ENST00000420503 OSTCQ9NRP0 149 aa8.03□□□□□ -1.12
LINC00339-203ENST00000420503 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.02□□□□□ -1.13
LINC00339-203ENST00000420503 TRAV8-4A0A0B4J246 113 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 A0A0J9YXV3 536 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 F2Z2F3 143 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 GATCO43716 136 aaKnown RBP8.02□□□□□ -1.13
LINC00339-203ENST00000420503 GAS8-AS1O95177 125 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 KRTAP10-8P60410 259 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 WDR73Q6P4I2 378 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 LYZL1Q6UWQ5 148 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 STPG4Q8N801 248 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 C7orf33Q8WU49 177 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 DPH3P1Q9H4G8 78 aa8.02□□□□□ -1.13
LINC00339-203ENST00000420503 A0A1B0GUV1 79 aa8.01□□□□□ -1.13
LINC00339-203ENST00000420503 FOXA3P55318 350 aaPredicted RBP8.01□□□□□ -1.13
LINC00339-203ENST00000420503 V9GYV3 84 aa8.01□□□□□ -1.13
LINC00339-203ENST00000420503 A8MWL6 223 aa8□□□□□ -1.13
LINC00339-203ENST00000420503 RPS10P46783 165 aaKnown RBP8□□□□□ -1.13
LINC00339-203ENST00000420503 CACNG7P62955 275 aa8□□□□□ -1.13
LINC00339-203ENST00000420503 ADIRFQ15847 76 aa8□□□□□ -1.13
LINC00339-203ENST00000420503 UQCC3Q6UW78 93 aa8□□□□□ -1.13
LINC00339-203ENST00000420503 TRAV26-2A0A0B4J265 109 aa7.99□□□□□ -1.13
LINC00339-203ENST00000420503 LINC00862A6NCI5 91 aa7.99□□□□□ -1.13
LINC00339-203ENST00000420503 FAM231BA6NCW3 169 aa7.99□□□□□ -1.13
LINC00339-203ENST00000420503 NTF3P20783 257 aa7.99□□□□□ -1.13
LINC00339-203ENST00000420503 AMTP48728 403 aa7.99□□□□□ -1.13
LINC00339-203ENST00000420503 RASL11AQ6T310 242 aa7.99□□□□□ -1.13
LINC00339-203ENST00000420503 TSKUQ8WUA8 353 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms