RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 SULT1A2P50226 295 aa11.07□□□□□ -0.64
PTCD1-202ENST00000419981 GFRA4Q9GZZ7 299 aa11.07□□□□□ -0.64
PTCD1-202ENST00000419981 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
PTCD1-202ENST00000419981 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
PTCD1-202ENST00000419981 AMTP48728 403 aa11.06□□□□□ -0.64
PTCD1-202ENST00000419981 COTL1Q14019 142 aa11.06□□□□□ -0.64
PTCD1-202ENST00000419981 WDR73Q6P4I2 378 aa11.06□□□□□ -0.64
PTCD1-202ENST00000419981 MED9Q9NWA0 146 aa11.06□□□□□ -0.64
PTCD1-202ENST00000419981 IGHV3-64A0A075B6Q5 118 aa11.05□□□□□ -0.64
PTCD1-202ENST00000419981 BCL2P10415 239 aa11.05□□□□□ -0.64
PTCD1-202ENST00000419981 CTRLP40313 264 aa11.05□□□□□ -0.64
PTCD1-202ENST00000419981 CIRBPQ14011 172 aaKnown RBP11.05□□□□□ -0.64
PTCD1-202ENST00000419981 C9orf62Q8N4C0 152 aa11.04□□□□□ -0.64
PTCD1-202ENST00000419981 PLA2G2DQ9UNK4 145 aa11.04□□□□□ -0.64
PTCD1-202ENST00000419981 NUDT10Q8NFP7 164 aa11.03□□□□□ -0.64
PTCD1-202ENST00000419981 NUDT11Q96G61 164 aa11.03□□□□□ -0.64
PTCD1-202ENST00000419981 TWIST1Q15672 202 aa11.02□□□□□ -0.65
PTCD1-202ENST00000419981 DPH3Q96FX2 82 aa11.02□□□□□ -0.65
PTCD1-202ENST00000419981 RNF185Q96GF1 192 aa11.02□□□□□ -0.65
PTCD1-202ENST00000419981 CNFNQ9BYD5 112 aa11.02□□□□□ -0.65
PTCD1-202ENST00000419981 RPP21Q9H633 154 aaKnown RBP11.02□□□□□ -0.65
PTCD1-202ENST00000419981 SLPIP03973 132 aa11.01□□□□□ -0.65
PTCD1-202ENST00000419981 CHTF8P0CG12 524 aa11.01□□□□□ -0.65
PTCD1-202ENST00000419981 A0A087WYN8 130 aa11□□□□□ -0.65
PTCD1-202ENST00000419981 IGKV3OR2-268A0A0C4DH90 116 aa11□□□□□ -0.65
PTCD1-202ENST00000419981 TAGLN2P37802 199 aaKnown RBP11□□□□□ -0.65
PTCD1-202ENST00000419981 C15orf56Q8N910 161 aa11□□□□□ -0.65
PTCD1-202ENST00000419981 GATD1Q8NB37 220 aa11□□□□□ -0.65
PTCD1-202ENST00000419981 SPACA4Q8TDM5 124 aa11□□□□□ -0.65
PTCD1-202ENST00000419981 RNASE7Q9H1E1 156 aaKnown RBP11□□□□□ -0.65
PTCD1-202ENST00000419981 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
PTCD1-202ENST00000419981 GAGE12HA6NDE8 117 aa10.99□□□□□ -0.65
PTCD1-202ENST00000419981 AMMECR1LQ6DCA0 310 aa10.99□□□□□ -0.65
PTCD1-202ENST00000419981 CFAP161Q6P656 301 aa10.99□□□□□ -0.65
PTCD1-202ENST00000419981 Q6ZRU5 148 aa10.99□□□□□ -0.65
PTCD1-202ENST00000419981 K7EN84 100 aa10.98□□□□□ -0.65
PTCD1-202ENST00000419981 SMIM15Q7Z3B0 74 aa10.98□□□□□ -0.65
PTCD1-202ENST00000419981 SLC51BQ86UW2 128 aa10.98□□□□□ -0.65
PTCD1-202ENST00000419981 HMCN2Q8NDA2 5059 aa10.98□□□□□ -0.65
PTCD1-202ENST00000419981 NCR2O95944 276 aa10.97□□□□□ -0.65
PTCD1-202ENST00000419981 Q6ZNX1 250 aa10.97□□□□□ -0.65
PTCD1-202ENST00000419981 OCC1Q8TAD7 63 aa10.97□□□□□ -0.65
PTCD1-202ENST00000419981 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
PTCD1-202ENST00000419981 APCSP02743 223 aa10.96□□□□□ -0.65
PTCD1-202ENST00000419981 HIGD2BQ4VC39 106 aa10.96□□□□□ -0.65
PTCD1-202ENST00000419981 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.65
PTCD1-202ENST00000419981 TCTE3Q8IZS6 198 aa10.96□□□□□ -0.65
PTCD1-202ENST00000419981 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.95□□□□□ -0.66
PTCD1-202ENST00000419981 IGKV2-29A2NJV5 120 aaPredicted RBP10.95□□□□□ -0.66
PTCD1-202ENST00000419981 H7C423 109 aa10.95□□□□□ -0.66
PTCD1-202ENST00000419981 MT1HL1P0DM35 61 aa10.95□□□□□ -0.66
PTCD1-202ENST00000419981 RPS10P46783 165 aaKnown RBP10.95□□□□□ -0.66
PTCD1-202ENST00000419981 COX6A2Q02221 97 aa10.95□□□□□ -0.66
PTCD1-202ENST00000419981 TEX261Q6UWH6 196 aa10.95□□□□□ -0.66
PTCD1-202ENST00000419981 GTSF1Q8WW33 167 aa10.95□□□□□ -0.66
PTCD1-202ENST00000419981 CHCHD10Q8WYQ3 142 aaPredicted RBP10.95□□□□□ -0.66
PTCD1-202ENST00000419981 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
PTCD1-202ENST00000419981 SDHAF1A6NFY7 115 aa10.94□□□□□ -0.66
PTCD1-202ENST00000419981 NDUFS6O75380 124 aaKnown RBP10.94□□□□□ -0.66
PTCD1-202ENST00000419981 C7orf33Q8WU49 177 aa10.94□□□□□ -0.66
PTCD1-202ENST00000419981 PHOX2AO14813 284 aa10.93□□□□□ -0.66
PTCD1-202ENST00000419981 GATCO43716 136 aaKnown RBP10.93□□□□□ -0.66
PTCD1-202ENST00000419981 FGF6P10767 208 aa10.93□□□□□ -0.66
PTCD1-202ENST00000419981 FOXA3P55318 350 aaPredicted RBP10.93□□□□□ -0.66
PTCD1-202ENST00000419981 GVQW2A0A096LPI5 108 aaPredicted RBP10.92□□□□□ -0.66
PTCD1-202ENST00000419981 ZNF25P17030 456 aaPredicted RBP10.92□□□□□ -0.66
PTCD1-202ENST00000419981 MAJINQ3KP22 176 aa10.92□□□□□ -0.66
PTCD1-202ENST00000419981 PRSS3P2Q8NHM4 247 aa10.92□□□□□ -0.66
PTCD1-202ENST00000419981 IGKV2-24A0A0C4DH68 120 aa10.91□□□□□ -0.66
PTCD1-202ENST00000419981 A8MWL6 223 aa10.91□□□□□ -0.66
PTCD1-202ENST00000419981 FAM231DQ6ZW35 169 aa10.91□□□□□ -0.66
PTCD1-202ENST00000419981 OR5A1Q8NGJ0 315 aa10.91□□□□□ -0.66
PTCD1-202ENST00000419981 TMEM250H0YL14 139 aa10.9□□□□□ -0.66
PTCD1-202ENST00000419981 I3L3M4 83 aa10.9□□□□□ -0.66
PTCD1-202ENST00000419981 PMCHP20382 165 aa10.9□□□□□ -0.66
PTCD1-202ENST00000419981 FOXI1Q12951 378 aa10.9□□□□□ -0.66
PTCD1-202ENST00000419981 BTF3L4Q96K17 158 aa10.9□□□□□ -0.66
PTCD1-202ENST00000419981 BORCS7Q96B45 105 aa10.89□□□□□ -0.67
PTCD1-202ENST00000419981 TMEM101Q96IK0 257 aa10.89□□□□□ -0.67
PTCD1-202ENST00000419981 TRBV6-5A0A0K0K1A5 114 aa10.88□□□□□ -0.67
PTCD1-202ENST00000419981 FAM231BA6NCW3 169 aa10.88□□□□□ -0.67
PTCD1-202ENST00000419981 XCL1P47992 114 aa10.88□□□□□ -0.67
PTCD1-202ENST00000419981 CT83Q5H943 113 aa10.88□□□□□ -0.67
PTCD1-202ENST00000419981 STPG4Q8N801 248 aa10.88□□□□□ -0.67
PTCD1-202ENST00000419981 UBR4Q5T4S7 5183 aa10.87□□□□□ -0.67
PTCD1-202ENST00000419981 A0A096LNI7 61 aa10.87□□□□□ -0.67
PTCD1-202ENST00000419981 CCL25O15444 150 aa10.87□□□□□ -0.67
PTCD1-202ENST00000419981 CEBPGP53567 150 aa10.87□□□□□ -0.67
PTCD1-202ENST00000419981 BLOC1S1P78537 153 aa10.87□□□□□ -0.67
PTCD1-202ENST00000419981 MRAP2Q96G30 205 aa10.87□□□□□ -0.67
PTCD1-202ENST00000419981 ST20Q9HBF5 79 aa10.87□□□□□ -0.67
PTCD1-202ENST00000419981 PKIGQ9Y2B9 76 aa10.87□□□□□ -0.67
PTCD1-202ENST00000419981 IGHV1-58A0A0C4DH39 117 aa10.86□□□□□ -0.67
PTCD1-202ENST00000419981 LINC00959A0A1B0GUT2 108 aa10.86□□□□□ -0.67
PTCD1-202ENST00000419981 TSHBP01222 138 aa10.86□□□□□ -0.67
PTCD1-202ENST00000419981 ESDP10768 282 aa10.86□□□□□ -0.67
PTCD1-202ENST00000419981 PRR3P79522 188 aaKnown RBP10.86□□□□□ -0.67
PTCD1-202ENST00000419981 ALKAL2Q6UX46 152 aa10.86□□□□□ -0.67
PTCD1-202ENST00000419981 TMEM242Q9NWH2 141 aa10.86□□□□□ -0.67
PTCD1-202ENST00000419981 GAS8-AS1O95177 125 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms