RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
HLA-DPA1-241ENST00000417724 CHCHD10Q8WYQ3 142 aaPredicted RBP4.87□□□□□ -1.63
HLA-DPA1-241ENST00000417724 TPPP3Q9BW30 176 aa4.87□□□□□ -1.63
HLA-DPA1-241ENST00000417724 MED28Q9H204 178 aa4.87□□□□□ -1.63
HLA-DPA1-241ENST00000417724 CACNG7P62955 275 aa4.86□□□□□ -1.63
HLA-DPA1-241ENST00000417724 Q5BKY6 102 aa4.86□□□□□ -1.63
HLA-DPA1-241ENST00000417724 AMMECR1LQ6DCA0 310 aa4.86□□□□□ -1.63
HLA-DPA1-241ENST00000417724 TMUB2Q71RG4 321 aa4.86□□□□□ -1.63
HLA-DPA1-241ENST00000417724 FER1L6-AS1Q8NA97 138 aa4.86□□□□□ -1.63
HLA-DPA1-241ENST00000417724 ALG5Q9Y673 324 aa4.86□□□□□ -1.63
HLA-DPA1-241ENST00000417724 FXYD6-FXYD2A0A087WZ82 144 aa4.85□□□□□ -1.63
HLA-DPA1-241ENST00000417724 SCO2A0A1W2PP80 73 aa4.85□□□□□ -1.63
HLA-DPA1-241ENST00000417724 F2Z2F3 143 aa4.85□□□□□ -1.63
HLA-DPA1-241ENST00000417724 PFDN1O60925 122 aa4.85□□□□□ -1.63
HLA-DPA1-241ENST00000417724 GIPP09681 153 aaPredicted RBP4.85□□□□□ -1.63
HLA-DPA1-241ENST00000417724 TRGC1P0CF51 173 aa4.85□□□□□ -1.63
HLA-DPA1-241ENST00000417724 RPS20P60866 119 aaKnown RBP4.85□□□□□ -1.63
HLA-DPA1-241ENST00000417724 ZNF664Q8N3J9 261 aa4.85□□□□□ -1.63
HLA-DPA1-241ENST00000417724 SFT2D1Q8WV19 159 aa4.85□□□□□ -1.63
HLA-DPA1-241ENST00000417724 XKRY2A2RUG3 117 aa4.84□□□□□ -1.63
HLA-DPA1-241ENST00000417724 H7C423 109 aa4.84□□□□□ -1.63
HLA-DPA1-241ENST00000417724 IGLC6P0CF74 106 aa4.84□□□□□ -1.63
HLA-DPA1-241ENST00000417724 RNASEKQ6P5S7 137 aaKnown RBP4.84□□□□□ -1.63
HLA-DPA1-241ENST00000417724 OR2D3Q8NGH3 330 aa4.84□□□□□ -1.63
HLA-DPA1-241ENST00000417724 CARD19Q96LW7 228 aa4.84□□□□□ -1.63
HLA-DPA1-241ENST00000417724 PSORS1C2Q9UIG4 136 aa4.84□□□□□ -1.63
HLA-DPA1-241ENST00000417724 IGHV1-58A0A0C4DH39 117 aa4.83□□□□□ -1.64
HLA-DPA1-241ENST00000417724 ZNF561-AS1K7EIQ3 104 aa4.83□□□□□ -1.64
HLA-DPA1-241ENST00000417724 NCR2O95944 276 aa4.83□□□□□ -1.64
HLA-DPA1-241ENST00000417724 NTF3P20783 257 aa4.83□□□□□ -1.64
HLA-DPA1-241ENST00000417724 RPL35P42766 123 aaKnown RBP4.83□□□□□ -1.64
HLA-DPA1-241ENST00000417724 XCL1P47992 114 aa4.83□□□□□ -1.64
HLA-DPA1-241ENST00000417724 SYCNQ0VAF6 134 aa4.83□□□□□ -1.64
HLA-DPA1-241ENST00000417724 FOXI1Q12951 378 aa4.83□□□□□ -1.64
HLA-DPA1-241ENST00000417724 MBD3L1Q8WWY6 194 aa4.83□□□□□ -1.64
HLA-DPA1-241ENST00000417724 TRAV26-2A0A0B4J265 109 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 A0A0U1RQV1 116 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 A0A1B0GV50 99 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 IFNA1P01562 189 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 MT-ND6P03923 174 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 FGF6P10767 208 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 ZNF25P17030 456 aaPredicted RBP4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 PTTG1IPP53801 180 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 LYZL1Q6UWQ5 148 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 KCNRGQ8N5I3 272 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 OR5A1Q8NGJ0 315 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 LINC00526Q96FQ7 95 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 BTF3L4Q96K17 158 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 CYTL1Q9NRR1 136 aa4.82□□□□□ -1.64
HLA-DPA1-241ENST00000417724 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 LOC107984640A0A0U1RRK4 108 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 IGKV2-29A2NJV5 120 aaPredicted RBP4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 UMAD1C9J7I0 102 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 CCL25O15444 150 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 GAGE2BQ13066 116 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 SS18Q15532 418 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 Q6ZNX1 250 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 C9orf62Q8N4C0 152 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 GATD1Q8NB37 220 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 FAM213BQ8TBF2 198 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 ISOC2Q96AB3 205 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 TMEM101Q96IK0 257 aa4.81□□□□□ -1.64
HLA-DPA1-241ENST00000417724 LINC00959A0A1B0GUT2 108 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 A0A1W2PNN7 141 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 C19orf71A6NCJ1 209 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 ARPC5O15511 151 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 APCSP02743 223 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 H2AFB1P0C5Y9 115 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 TWIST1Q15672 202 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 CENPWQ5EE01 88 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 C1orf137Q5JT78 98 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 TEX261Q6UWH6 196 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 PRR26Q8N8Z3 221 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 DIRC1Q969H9 104 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 SMIM12Q96EX1 92 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 KRTAP3-3Q9BYR6 98 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 BIN3Q9NQY0 253 aa4.8□□□□□ -1.64
HLA-DPA1-241ENST00000417724 LPAP08519 4548 aa4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 SDHAF1A6NFY7 115 aa4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 CAMPP49913 170 aa4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 GNG4P50150 75 aa4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 EIF5AP63241 154 aaKnown RBP4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 CCL20P78556 96 aa4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 EIF5AL1Q6IS14 154 aaKnown RBP4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 SMIM15Q7Z3B0 74 aa4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 C11orf52Q96A22 123 aa4.79□□□□□ -1.64
HLA-DPA1-241ENST00000417724 IGLV4-69A0A075B6H9 119 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 RAB19A4D1S5 217 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 I3L3M4 83 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 APOMO95445 188 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 PMCHP20382 165 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 MALP21145 153 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 CTRLP40313 264 aa4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 RPL39LQ96EH5 51 aaKnown RBP4.78□□□□□ -1.64
HLA-DPA1-241ENST00000417724 FAM210AQ96ND0 272 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms