RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 CIDEAO60543 219 aa13.68□□□□□ -0.22
RAB3IP-205ENST00000417413 TRGV2A0A075B6R0 118 aa13.68□□□□□ -0.22
RAB3IP-205ENST00000417413 TRBV10-1A0A0K0K1A3 114 aa13.68□□□□□ -0.22
RAB3IP-205ENST00000417413 APOC4P55056 127 aa13.68□□□□□ -0.22
RAB3IP-205ENST00000417413 LBHQ53QV2 105 aaPredicted RBP13.68□□□□□ -0.22
RAB3IP-205ENST00000417413 LINC00612Q8N6U2 182 aa13.68□□□□□ -0.22
RAB3IP-205ENST00000417413 SLC25A29Q8N8R3 303 aa13.68□□□□□ -0.22
RAB3IP-205ENST00000417413 C2orf88Q9BSF0 95 aa13.68□□□□□ -0.22
RAB3IP-205ENST00000417413 CHCHD7Q9BUK0 85 aa13.68□□□□□ -0.22
RAB3IP-205ENST00000417413 STAB1Q9NY15 2570 aa13.67□□□□□ -0.22
RAB3IP-205ENST00000417413 TCTAP57738 103 aa13.67□□□□□ -0.22
RAB3IP-205ENST00000417413 PMVKQ15126 192 aa13.67□□□□□ -0.22
RAB3IP-205ENST00000417413 OXLD1Q5BKU9 147 aa13.67□□□□□ -0.22
RAB3IP-205ENST00000417413 ZC2HC1BQ5TFG8 222 aa13.67□□□□□ -0.22
RAB3IP-205ENST00000417413 ZNRF2Q8NHG8 242 aa13.67□□□□□ -0.22
RAB3IP-205ENST00000417413 CST9LQ9H4G1 147 aa13.67□□□□□ -0.22
RAB3IP-205ENST00000417413 TRBV7-3A0A075B6L6 115 aa13.66□□□□□ -0.22
RAB3IP-205ENST00000417413 IGHV3-38A0A0C4DH36 116 aa13.66□□□□□ -0.22
RAB3IP-205ENST00000417413 EMP1P54849 157 aa13.66□□□□□ -0.22
RAB3IP-205ENST00000417413 PHLDA1Q8WV24 401 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-205ENST00000417413 IGKV2D-26A0A0A0MRZ7 120 aa13.65□□□□□ -0.22
RAB3IP-205ENST00000417413 EGFEM1PQ0D2K5 195 aa13.65□□□□□ -0.22
RAB3IP-205ENST00000417413 BOD1L2Q8IYS8 172 aa13.65□□□□□ -0.22
RAB3IP-205ENST00000417413 OPRPNQ99935 248 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-205ENST00000417413 FAM104AQ969W3 186 aa13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 PYGO1Q9Y3Y4 419 aa13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 IGLV4-69A0A075B6H9 119 aa13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 DLEU1O43261 78 aa13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 IGHV4-30-4P0DP06 118 aa13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 RPL36AP83881 106 aaKnown RBP13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 COTL1Q14019 142 aa13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 FHL2Q14192 279 aa13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 DEFB135Q30KP9 77 aa13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 C2orf91Q6ZV80 131 aa13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 RPL36ALQ969Q0 106 aaKnown RBP13.64□□□□□ -0.23
RAB3IP-205ENST00000417413 IGLV4-3A0A075B6K6 122 aa13.63□□□□□ -0.23
RAB3IP-205ENST00000417413 TRBV6-4A0A1B0GX49 114 aa13.63□□□□□ -0.23
RAB3IP-205ENST00000417413 NMUP48645 174 aa13.63□□□□□ -0.23
RAB3IP-205ENST00000417413 KRTAP10-11P60412 298 aa13.63□□□□□ -0.23
RAB3IP-205ENST00000417413 UBE2D3P61077 147 aa13.63□□□□□ -0.23
RAB3IP-205ENST00000417413 UBE2D2P62837 147 aa13.63□□□□□ -0.23
RAB3IP-205ENST00000417413 PCP2Q8IVA1 136 aa13.63□□□□□ -0.23
RAB3IP-205ENST00000417413 TRGV4A0A0C4DH28 118 aa13.61□□□□□ -0.23
RAB3IP-205ENST00000417413 C11orf86A6NJI1 115 aa13.61□□□□□ -0.23
RAB3IP-205ENST00000417413 DAZ4Q86SG3 579 aaKnown RBP13.61□□□□□ -0.23
RAB3IP-205ENST00000417413 DAZ3Q9NR90 486 aaKnown RBP13.61□□□□□ -0.23
RAB3IP-205ENST00000417413 GAGE12JA6NER3 117 aa13.6□□□□□ -0.23
RAB3IP-205ENST00000417413 NPSP0C0P6 89 aa13.6□□□□□ -0.23
RAB3IP-205ENST00000417413 GAGE1Q13065 139 aa13.6□□□□□ -0.23
RAB3IP-205ENST00000417413 GAGE4Q13068 117 aa13.6□□□□□ -0.23
RAB3IP-205ENST00000417413 GAGE5Q13069 117 aa13.6□□□□□ -0.23
RAB3IP-205ENST00000417413 GAGE13Q4V321 117 aa13.6□□□□□ -0.23
RAB3IP-205ENST00000417413 OR11H2Q8NH07 326 aa13.6□□□□□ -0.23
RAB3IP-205ENST00000417413 UBE2D4Q9Y2X8 147 aa13.6□□□□□ -0.23
RAB3IP-205ENST00000417413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 IGKV2-29A2NJV5 120 aaPredicted RBP13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 DEFB130BP0DP73 79 aa13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 DEFB130AP0DP74 79 aa13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 BATFQ16520 125 aa13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 PAPPA-AS1Q5QFB9 102 aa13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 SAMD5Q5TGI4 173 aa13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 CEMP1Q6PRD7 247 aaPredicted RBP13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 AMELXQ99217 191 aa13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 SPANXA1Q9NS26 97 aa13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 TRRAPQ9Y4A5 3859 aa13.59□□□□□ -0.23
RAB3IP-205ENST00000417413 LOC100131303A0A0U1RQF7 123 aa13.58□□□□□ -0.24
RAB3IP-205ENST00000417413 HINT1P49773 126 aaPredicted RBP13.58□□□□□ -0.24
RAB3IP-205ENST00000417413 CRYBA4P53673 196 aa13.58□□□□□ -0.24
RAB3IP-205ENST00000417413 NTM-AS1Q6ZSK4 140 aa13.58□□□□□ -0.24
RAB3IP-205ENST00000417413 TTTY13Q9BZ97 58 aa13.58□□□□□ -0.24
RAB3IP-205ENST00000417413 LYRM9A8MSI8 78 aa13.57□□□□□ -0.24
RAB3IP-205ENST00000417413 SIVA1O15304 175 aa13.57□□□□□ -0.24
RAB3IP-205ENST00000417413 KRTAP21-3Q3LHN1 58 aa13.57□□□□□ -0.24
RAB3IP-205ENST00000417413 RNF183Q96D59 192 aa13.57□□□□□ -0.24
RAB3IP-205ENST00000417413 VCX2Q9H322 139 aa13.57□□□□□ -0.24
RAB3IP-205ENST00000417413 IGHV4-28A0A0C4DH34 117 aa13.57□□□□□ -0.24
RAB3IP-205ENST00000417413 G3V4G9 280 aa13.57□□□□□ -0.24
RAB3IP-205ENST00000417413 FAM222AQ5U5X8 452 aa13.57□□□□□ -0.24
RAB3IP-205ENST00000417413 NFE4Q86UQ8 179 aa13.57□□□□□ -0.24
RAB3IP-205ENST00000417413 MPV17L2Q567V2 206 aa13.56□□□□□ -0.24
RAB3IP-205ENST00000417413 Q8NAQ8 132 aa13.56□□□□□ -0.24
RAB3IP-205ENST00000417413 TIMM21Q9BVV7 248 aa13.56□□□□□ -0.24
RAB3IP-205ENST00000417413 A0A1B0GV90 55 aa13.55□□□□□ -0.24
RAB3IP-205ENST00000417413 E9PLD3 99 aa13.55□□□□□ -0.24
RAB3IP-205ENST00000417413 LINC00694P0DN24 101 aa13.55□□□□□ -0.24
RAB3IP-205ENST00000417413 MIFP14174 115 aa13.55□□□□□ -0.24
RAB3IP-205ENST00000417413 SBSPONQ8IVN8 264 aa13.55□□□□□ -0.24
RAB3IP-205ENST00000417413 MAPKAPK5-AS1Q8N8E1 139 aa13.55□□□□□ -0.24
RAB3IP-205ENST00000417413 PRADC1Q9BSG0 188 aa13.55□□□□□ -0.24
RAB3IP-205ENST00000417413 A8MZ25 164 aa13.54□□□□□ -0.24
RAB3IP-205ENST00000417413 GTSF1LQ9H1H1 148 aa13.54□□□□□ -0.24
RAB3IP-205ENST00000417413 DEFB4AO15263 64 aa13.53□□□□□ -0.24
RAB3IP-205ENST00000417413 MRPS36P82909 103 aaKnown RBP13.53□□□□□ -0.24
RAB3IP-205ENST00000417413 BVES-AS1Q5T3Y7 98 aa13.53□□□□□ -0.24
RAB3IP-205ENST00000417413 ANK2Q01484 3957 aa13.52□□□□□ -0.24
RAB3IP-205ENST00000417413 TRAV8-6A0A0B4J262 113 aa13.52□□□□□ -0.25
RAB3IP-205ENST00000417413 A0A0J9YXV3 536 aa13.52□□□□□ -0.25
RAB3IP-205ENST00000417413 TMEM97Q5BJF2 176 aa13.52□□□□□ -0.25
RAB3IP-205ENST00000417413 COL5A1-AS1Q5SY13 56 aa13.52□□□□□ -0.25
RAB3IP-205ENST00000417413 Q6ZUT4 128 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1125.8 ms