RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 SMG1Q96Q15 3661 aaKnown RBP4.68□□□□□ -1.66
CCNT1-202ENST00000417344 SMIM26A0A096LP01 95 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 IGHV3-49A0A0A0MS15 119 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 CD28P10747 220 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 XCL1P47992 114 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 CIRBPQ14011 172 aaKnown RBP4.68□□□□□ -1.66
CCNT1-202ENST00000417344 FP248Q71RG6 208 aaPredicted RBP4.68□□□□□ -1.66
CCNT1-202ENST00000417344 C20orf197Q8N268 126 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 LY6G5BQ8NDX9 201 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 NUP37Q8NFH4 326 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 ITLN2Q8WWU7 325 aaPredicted RBP4.68□□□□□ -1.66
CCNT1-202ENST00000417344 Q9HAA7 133 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 C14orf132Q9NPU4 83 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 XCL2Q9UBD3 114 aa4.68□□□□□ -1.66
CCNT1-202ENST00000417344 KNCNA6PVL3 124 aa4.67□□□□□ -1.66
CCNT1-202ENST00000417344 TRBV12-3P01733 135 aa4.67□□□□□ -1.66
CCNT1-202ENST00000417344 C20orf173Q96LM9 149 aa4.67□□□□□ -1.66
CCNT1-202ENST00000417344 M0QY20 66 aa4.67□□□□□ -1.66
CCNT1-202ENST00000417344 NDUFA1O15239 70 aa4.67□□□□□ -1.66
CCNT1-202ENST00000417344 FAM74A4Q5TZK3 123 aa4.67□□□□□ -1.66
CCNT1-202ENST00000417344 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
CCNT1-202ENST00000417344 COPS9Q8WXC6 57 aa4.67□□□□□ -1.66
CCNT1-202ENST00000417344 ZZEF1O43149 2961 aa4.67□□□□□ -1.66
CCNT1-202ENST00000417344 H7BZZ5 65 aa4.66□□□□□ -1.66
CCNT1-202ENST00000417344 RPL28P46779 137 aaKnown RBP4.66□□□□□ -1.66
CCNT1-202ENST00000417344 HILS1P60008 231 aa4.66□□□□□ -1.66
CCNT1-202ENST00000417344 C15orf32Q32M92 178 aa4.66□□□□□ -1.66
CCNT1-202ENST00000417344 C9orf129Q5T035 196 aaKnown RBP4.66□□□□□ -1.66
CCNT1-202ENST00000417344 APRG1Q8IVJ8 170 aa4.66□□□□□ -1.66
CCNT1-202ENST00000417344 TMEM105Q8N8V8 129 aa4.66□□□□□ -1.66
CCNT1-202ENST00000417344 FAM104AQ969W3 186 aa4.66□□□□□ -1.66
CCNT1-202ENST00000417344 OBSCN-AS1Q96MR7 158 aa4.66□□□□□ -1.66
CCNT1-202ENST00000417344 TRAV23DV6A0A075B6W5 121 aa4.65□□□□□ -1.66
CCNT1-202ENST00000417344 A0A0U1RQV1 116 aa4.65□□□□□ -1.66
CCNT1-202ENST00000417344 HOXD3P31249 432 aaPredicted RBP4.65□□□□□ -1.66
CCNT1-202ENST00000417344 RNASE6Q93091 150 aaKnown RBP4.65□□□□□ -1.66
CCNT1-202ENST00000417344 OVOL2Q9BRP0 275 aa4.65□□□□□ -1.66
CCNT1-202ENST00000417344 CDSNQ15517 529 aa4.65□□□□□ -1.67
CCNT1-202ENST00000417344 ATP5EP2Q5VTU8 51 aa4.65□□□□□ -1.67
CCNT1-202ENST00000417344 HIST2H2BCQ6DN03 193 aa4.65□□□□□ -1.67
CCNT1-202ENST00000417344 HIST2H2BDQ6DRA6 164 aa4.65□□□□□ -1.67
CCNT1-202ENST00000417344 SEM1Q6ZVN7 128 aa4.65□□□□□ -1.67
CCNT1-202ENST00000417344 FAM110DQ8TAY7 271 aaPredicted RBP4.65□□□□□ -1.67
CCNT1-202ENST00000417344 DPM3Q9P2X0 92 aa4.65□□□□□ -1.67
CCNT1-202ENST00000417344 MED13Q9UHV7 2174 aa4.64□□□□□ -1.67
CCNT1-202ENST00000417344 DEFB1P60022 68 aa4.64□□□□□ -1.67
CCNT1-202ENST00000417344 RNASE13Q5GAN3 156 aaKnown RBP4.64□□□□□ -1.67
CCNT1-202ENST00000417344 S100A7L2Q5SY68 101 aa4.64□□□□□ -1.67
CCNT1-202ENST00000417344 LYPD5Q6UWN5 251 aa4.64□□□□□ -1.67
CCNT1-202ENST00000417344 CLEC19AQ6UXS0 136 aa4.64□□□□□ -1.67
CCNT1-202ENST00000417344 SOSTDC1Q6X4U4 206 aa4.64□□□□□ -1.67
CCNT1-202ENST00000417344 MALRD1Q5VYJ5 2156 aa4.64□□□□□ -1.67
CCNT1-202ENST00000417344 A0A0U1RRA0 63 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 SOCS3O14543 225 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 CACNA1EQ15878 2313 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 CSMD1Q96PZ7 3565 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 IGHV7-81A0A0B4J1V7 117 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 F6UB75 175 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 ATP1A1-AS1Q5TC04 95 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 WFDC9Q8NEX5 89 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 Q9H8V8 135 aa4.63□□□□□ -1.67
CCNT1-202ENST00000417344 CADP27708 2225 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 KIAA0100Q14667 2235 aaKnown RBP4.62□□□□□ -1.67
CCNT1-202ENST00000417344 A0A087WYN8 130 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 KLKP1Q107X0 134 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 ZNF625Q96I27 306 aaPredicted RBP4.62□□□□□ -1.67
CCNT1-202ENST00000417344 LINC00474Q9P2X8 69 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 AHCTF1Q8WYP5 2266 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 KALRNO60229 2985 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 TRAV13-2A0A0B4J235 113 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 TRBV7-6A0A0J9YX20 115 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 TRBV10-3A0A0K0K1G6 114 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 KLLNB2CW77 178 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 PATE3B3GLJ2 98 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 NCR3O14931 201 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 CCKP06307 115 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 ECSCRQ19T08 205 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 ENHOQ6UWT2 76 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 FAM19A1Q7Z5A9 133 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 CDKN2A-AS1Q9UH64 79 aa4.62□□□□□ -1.67
CCNT1-202ENST00000417344 TRAV7A0A075B6U4 112 aa4.61□□□□□ -1.67
CCNT1-202ENST00000417344 IGLV5-45A0A087WSX0 123 aa4.61□□□□□ -1.67
CCNT1-202ENST00000417344 BCE1O60756 84 aa4.61□□□□□ -1.67
CCNT1-202ENST00000417344 KLK9Q2XQG4 91 aa4.61□□□□□ -1.67
CCNT1-202ENST00000417344 C19orf54Q5BKX5 351 aa4.61□□□□□ -1.67
CCNT1-202ENST00000417344 Q8N6K4 173 aa4.61□□□□□ -1.67
CCNT1-202ENST00000417344 KLK9Q9UKQ9 250 aa4.61□□□□□ -1.67
CCNT1-202ENST00000417344 DSPP15924 2871 aaKnown RBP4.61□□□□□ -1.67
CCNT1-202ENST00000417344 IGHV3-16A0A0C4DH30 117 aa4.6□□□□□ -1.67
CCNT1-202ENST00000417344 CRPP02741 224 aa4.6□□□□□ -1.67
CCNT1-202ENST00000417344 PRRC2AP48634 2157 aaKnown RBP4.6□□□□□ -1.67
CCNT1-202ENST00000417344 RBM3P98179 157 aaKnown RBP4.6□□□□□ -1.67
CCNT1-202ENST00000417344 MUC4Q99102 2169 aa4.6□□□□□ -1.67
CCNT1-202ENST00000417344 TNRC18O15417 2968 aaPredicted RBP4.6□□□□□ -1.67
CCNT1-202ENST00000417344 COL27A1Q8IZC6 1860 aaPredicted RBP4.6□□□□□ -1.67
CCNT1-202ENST00000417344 CACNA1GO43497 2377 aa4.6□□□□□ -1.67
CCNT1-202ENST00000417344 IGLV5-39A0A0G2JS06 123 aa4.6□□□□□ -1.67
CCNT1-202ENST00000417344 A0A1W2PNU3 283 aaPredicted RBP4.6□□□□□ -1.67
CCNT1-202ENST00000417344 F8WEM9 126 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms